Dpau008042.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila paucipuncta
Gene Symbol
RREB1
Assembly
GCA_035043875.1
Location
JAWNMP010000268.1:34223453-34231599[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.006 0.39 11.2 0.6 1 21 260 280 260 282 0.96
2 13 0.00034 0.022 15.1 0.2 1 23 292 314 292 314 0.98
3 13 0.00026 0.017 15.5 7.2 1 23 320 342 320 342 0.98
4 13 0.38 25 5.6 1.8 2 20 547 565 547 567 0.93
5 13 0.016 1.1 9.9 0.2 1 23 718 740 718 740 0.97
6 13 1.3e-05 0.00083 19.7 0.7 1 23 750 772 750 772 0.99
7 13 0.00085 0.056 13.9 2.0 1 23 778 801 778 801 0.97
8 13 0.003 0.2 12.2 2.0 1 23 1079 1102 1079 1102 0.95
9 13 8.9e-05 0.0058 17.0 0.3 2 23 1492 1513 1491 1513 0.97
10 13 0.15 9.7 6.8 6.3 1 23 1519 1542 1519 1542 0.97
11 13 9.6 6.3e+02 1.1 3.4 1 23 1660 1683 1660 1683 0.78
12 13 0.0086 0.56 10.7 0.5 3 23 1743 1763 1741 1763 0.96
13 13 0.0014 0.089 13.2 4.8 1 23 1769 1791 1769 1791 0.99

Sequence Information

Coding Sequence
ATGCTcgccacacagcagcagcagcaacaacaacagcaacaatcgcacacagcatcagcaactgcagcagcagcagcagcacatgaGGATGCTCGGGATTTGGGATTAATGGAGACGCGACAACGTCGTGATTCGAGCACCTCAGAATCCTCGCTGGAGCATTTGGATTTGGGGCGCACGCCCAAAaaattgagcagcagcagcagcgcaccGCAGCCGACGTCGACGCCGCACGACACAGCAGTGACAGCGACGTCGCGCAAGCGCAAACTGCGAcagcaacaccaccagcagcagcagcagcaacagttgccactcTCCGAtgaggagcaacagcaacagcagcagcagctgttggaCTCATCAGCGCAGCGACCGCGTCACAAGCAGCGACGCAGCgccgttgctgccgctgccagcgCCAGCATCGTTGTCGACTACAGCGCCAGCGGCGACGCCAGCTCGCTGCGCAAAAAGTTTCGACTGAAtcgcagcagcgccagcagcaatgCCGCCAACGGTGATTTATCCGAATCGGGCTTCGTTGATGGCAGCGCCCTCAGTGGCTATCTgcttggcagcaacaacaacaacaataataataataacaacaacaacaatatcagtaatagtagcagcagcagcgcagtcgctcagtcagcagcagcagcgtcgggAGCGCAGCATGCGCCAAGCGTTAGCAGCTCGGGCGGCTCCTCGCCACAGGGCCTCTCGAGCGCCGAGTCGGGCATCGGTGCCGGTGATGAGCACATGAAATATGTGTGCCCCATTTGCGAGGTCGTCTCGGCCACGCCCCACGAATTCACCAATCACATTCGCTGCCACAACTACGCCAACGGCGACACCGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTGTCGTCGGCATCCTCGCTGGACCGGCATGTCCTGGTGCACACTGGAGAGCGTCCGTTCAACTGTCGCTATTGCCACTTGAACTTCACAACCAATGGGAACATGCACCGACACATGCGCACCCACAAGCAACATCAggcgtcgcagcagcagcaacagcagcagcagcactcgcaacagcagcagtccacacaacagcagcaacaggcacagtcgcagcaacaacagcagcgacgccagcaACATGCAggtggagcaggagcagctgaTTCGGTATCGGGATCAGCACAGTTGTTGACGACCCGAGCGGAGAGCTATGAGAGTGATGCCAGCTGCTCGACGGATGTccacaaaacgaacaacaataataataacaacaacaacaacaatgaggaTGAGCTTGAGCTGGAGGATGAGCAGCTAGTGCTGAGCAGCAAACAGCGACGCCACAAGGCAGccctaaacaacaacaatataattaGGGATGAAAAGCACGAGAATCGGCCGGATGATGATTCGGATGTGGAGAGCACTGATAGCGTTGCCCAGGTGATAACTAGCACACCGGATGTGGCCACGCTGCTCGCCTCGGGCGGCACCTCGCCCACCCACTCGCATTCGGAATCGCATTCAccgccgctgcagctgcagagCTGCCCGGCCTGCAATTCGGGTGAATTTGAATCTGTGCCAGCGTTGTGCGCCCATCTGGATGCCGAGCATGCGGACATACCGGCCAAGTGTCGCGAGTGTGAGGTGATATTTGCCACACATCGGCAGCTGCAGGTGCACAGCTGTCGAGGACTGCCGCCGCTGCTTGGTGTGAGCTCATCGCCACTGCACAAGCAGGAGGAGAGCGAACTGGaggagcagcaccagcaacaccagcagcagcagcagcacgaggTTGACcacgaacagcagcagcacaagcaggAGGAACAGGAGCAGGCTGAGCAGCGCGAATGCGAAGATTTCTTCCAGCAGCTGTATCTGAAGAATAAATCGTCAGCAACGCTGCTTCCCTCACCGATCAAACATGAGCCGGCGGATCAGCGACAGGATCTGGCCGATATTCAAAGCATACTCAATATGACCAGTTCCAGCTGCACCTCGAGTTTCCTGCGCAATTTCGAGCAGTCGGTGAACACGCCCTGCTCCAGCCAATATAGCGTCGATGGACGCGATGGCGAGGAGGAGGCCCAGGATGCCTTCACCAATGAATTCCGCCGCATGAAACTGCGCGGTGAGTTCCCCTGCAAGCTGTGCACCGCCGTCTTTCCCAATCTGCGGGCACTCAAGGGCCACAATCGCTACCATCTGTCGGAGGTGGGCGCCGCCGGTCCATTCCGTTGCAACATGTGTCCCTATGCCGTCTGCGACAAGGCGGCGCTCGTGCGGCACATGCGCACCCACAACGGTGATCGGCCCTACGAGTGCGCCGTCTGCAATTATGCGTTCACCACCAAGGCGAACTGTGAGCGGCATTTGCGCAATCGACATGGCAAGACCAGTCGCGAGGATGTGAAACGTGCGATTGTCTATCATCCGGCCGAGGATGCCAGCTGCGAGGAGAACAAATCGCGGACCGAGGCCGATATCCTGACGGAGTTGAGCGGTTATCGTTGTGCAACACCCACGGAGCACAGCTCCTCGGCTAGCTCCTCATCACAGCTGAAGCACATGTTGCTGGCTGAGCCGACGCCGGCCGTAaaggtagcagcaacaacggctgcagcagcagcagcaacaacaacatcgctGCCACAACAACCGCTCAAGATTCAGGTGAAGAGCTTGGATCAGCTGGTGGATAAGCCAGTGCCAGCACTCGATCTCAGCATGGATGCGCTCGACCTGAGCAAGAAGCCCGCCCAGCTGCTGGCCGAGCAACGGGAGCAAAGGGAGCAGCTCGAAAGACAcgaattgctgctgcagcagcaacagcagcagcaacaacaacagcagcagcagcaacagcagcagcaacaacaaatgtttgGGGCTGGCGATGCAGCTGCTCAGTATATGCAACAGCTGTTGCGCAGCTTCATGCTCCAGCAATCACCCGGTTTTCCTTTCTTTGGTTTTATGGCGCCACCGCCACcaacaacggcagcggcagtagcagcggcagcagcagcaacagcagcagacaagTCAATGACAACAaatccaacagcagcagcagccggcgcaacagcagcaacaattgctgcaatGCCACTGTCGCTGCCAGTGCCACTGCCCGCTGGTGGTCCCGTCAAGATGGTCATCAAGAATGGCGTCCTGATGcccaagcagaagcagcgcCGCTATCGCACCGAGCGTCCCTTTGCCTGCGAGCATTGCTCGGCCCGCTTCACCCTGCGCTCCAACATGGAGCGGCACgtaaagcagcagcatccacagTTCTATGCGCAGCGCCAGCGACACCGCAGCGGTCATCATGTGATGCGTGAACGGGCTGCATCCTCGAGTGCTGCCCAAGCGGCAGCCGCTGctcaggcagcagcagccgccgccgccgcagcaaTGAGTAATctcagccagcagcaacagttgcagcagcagcagcaacagttgcagcattcgcattcacatcACGTCCATGCGCCAATCTCGGAGCAGgtgaaatatgcaattttgGCGCAGCAATTGAAGGCGCGCAAGGATACCGATTTGTTGCAACAGGCACTGGCACATGGCTCCAGCAGTGTTGTCGCCAATCCGCTGTTGCATTttagctacaacaacaacaacaacggcaacagcatcagcagcagcaagcagcagcaacaacagttgtgcAACAACACTGGCAACACTTTGGTGATGGACGACGATGAGCCGCCCAAGCTGATCATTGACGAGGATGACGAGGATGTGGATGGCGAggacgatgaggatgaggaggaggagcaagaatttgatgttgatgaggaggagcaggaggatgAGGAGATGGACTTGGACGatgagcatcagcagcagccgcacgaggaggatgacgatgatgatattgatgatgatgacgcggcagcagctgctgcagcagagGCGtcgcagcaacaattgcagccaACCAAAGACAAGCTGCAATCCAAGCCAATTGAGGCGGCCAAAAAGGTAGCGGAAACCATATTGGAGCAGGCAATCAAAGAGCGCGAGGAGAATGCCGTCGAGAAGCAGCCGCATCCTCAATCGGAGTCCATCGGCGGCAATAAGCCGGCGACGCCAACCACAATGAAAACGATGATTGCACAAGCTGAATCGGTGGCGAAGTCCTTGAAGGAGGTGGCCAGTTCACCGTTCAAGGATGAATCTCAGGATCTGGTGCCGGTCGCCAAACTGGTGGACAATGCGACCAGCAATCAGGTGTCGTTCAACAGCTATTTCCGTCCCAGCGACGTCGCCAATCACATGGAGCAGAGCGACGAGGAGGGTCTCGTTGCCAGCGGCAGCGCCAGCGAGAGCAACAATTCCGGCACCGAGGAtgtgaccagcagcagcagcagctgcggcaaTGACACCAAAAAGAAATCCGCCTACAGCCTGGCACCGAACCGTGTCAGCTGCCCGTATTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTGCGTCGCCACATCCTGACGCACACCGGCCAGAAGCCGTTCAAGTGCTCCCACTGCCCGCTGCTGTTCACCACGAAGAGCAACTGCGATCGCCATCTGTTGCGCAAGCATGGCAACGTTGAGTCCGCCATGTCCGTCTATGTGCCCACCGAGGATGTCAGCGAACCGATACCCGTGCCCAAGTCCGTCGAGGAGATTGAGCTCGAGGAGCAGCGACGTCGCCAGGCGGCCGAAGCCGAACAGGCCGAGCGTGAGCAGCGCGAGCGCCAAAAGGAGCGCGAACGTGAACTGGAAttggaacgggaacgggaacgggaacacCAACAGTTGATACAACAGTTGCGCCAACAAAtggccgctgctgcagcggctgctgtCGCTGTGGCCGCCGTTGCTGCACCAGCGCATCCACCACCGCCAGACCAATCGCCACCAGGCCTGGAGGCGAGCAGTGATCTGCCCTACAAATGCCATCTGTGCGAGTTCTCATTCGGCGAGCGGCTGCAGTGCCTCGAGCACATCAAGCAGCTGCACGCACACGAGTTCGCcctgctgctggccaaggGGGCCATCGAAACGGATGCACAGctgcagcaccaacagcagcaacagttgccagcgGCTGGTGGCGCTCCGCATTCGGAtgatgaggctgctgctgtcggcACCAGATCGGGCAAATATCCCGACTATAGCAATCGTAAAGTGATTTGCGCATTTTGCGTGCGTCGCTTCTGGTCAACAGAGGATCTGCGGCGCCACATGCGCACCCATTCCGGTGAGCGACCATTCCAGTGCGAGATCTGCTTGAGGAAGTTCACATTGAAGCACAGCATGCTGCGACACATGAAGAAGCACAGTGGACGCAGTCACAATGGTGGCGAGCTCGATCATCAGTCCGATTGTTCCGAAGATGAGCAACTGTTGCCCTGCTCCCCACCCTCAACGCCAACGcccactaacaacaacaacaacaacaacacttgccagaacaacaacaataacaataacaacaacaacaacactagcAATAGCAAGCAGGTGCTGCGCGAGCTGCTGGGCAAGGCGAACGAGTGGCGAGTGAGTCGCCTGGGTGAGCACAAGGAGAACATTGccgaggcaacaacaacaccctcagcagcaacagcagcagcggcggcagcaacagctgcagccgcagcatcagcagcagcagctgctgtggcCAGTGGCGATCTGATTGGTAATCTGTTGGGGATCAGTGATCAGGGCATACTAAACAAGCTGCTCTCCTCACCAGACGAAGCTGCCAAGCTGCTAGGCGTGGAGAAGTAA
Protein Sequence
MLATQQQQQQQQQQSHTASATAAAAAAHEDARDLGLMETRQRRDSSTSESSLEHLDLGRTPKKLSSSSSAPQPTSTPHDTAVTATSRKRKLRQQHHQQQQQQQLPLSDEEQQQQQQQLLDSSAQRPRHKQRRSAVAAAASASIVVDYSASGDASSLRKKFRLNRSSASSNAANGDLSESGFVDGSALSGYLLGSNNNNNNNNNNNNNISNSSSSSAVAQSAAAASGAQHAPSVSSSGGSSPQGLSSAESGIGAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLNFTTNGNMHRHMRTHKQHQASQQQQQQQQHSQQQQSTQQQQQAQSQQQQQRRQQHAGGAGAADSVSGSAQLLTTRAESYESDASCSTDVHKTNNNNNNNNNNNEDELELEDEQLVLSSKQRRHKAALNNNNIIRDEKHENRPDDDSDVESTDSVAQVITSTPDVATLLASGGTSPTHSHSESHSPPLQLQSCPACNSGEFESVPALCAHLDAEHADIPAKCRECEVIFATHRQLQVHSCRGLPPLLGVSSSPLHKQEESELEEQHQQHQQQQQHEVDHEQQQHKQEEQEQAEQRECEDFFQQLYLKNKSSATLLPSPIKHEPADQRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSVDGRDGEEEAQDAFTNEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRYHLSEVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCEENKSRTEADILTELSGYRCATPTEHSSSASSSSQLKHMLLAEPTPAVKVAATTAAAAAATTTSLPQQPLKIQVKSLDQLVDKPVPALDLSMDALDLSKKPAQLLAEQREQREQLERHELLLQQQQQQQQQQQQQQQQQQQQMFGAGDAAAQYMQQLLRSFMLQQSPGFPFFGFMAPPPPTTAAAVAAAAAATAADKSMTTNPTAAAAGATAATIAAMPLSLPVPLPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRHRSGHHVMRERAASSSAAQAAAAAQAAAAAAAAAMSNLSQQQQLQQQQQQLQHSHSHHVHAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVVANPLLHFSYNNNNNGNSISSSKQQQQQLCNNTGNTLVMDDDEPPKLIIDEDDEDVDGEDDEDEEEEQEFDVDEEEQEDEEMDLDDEHQQQPHEEDDDDDIDDDDAAAAAAAEASQQQLQPTKDKLQSKPIEAAKKVAETILEQAIKEREENAVEKQPHPQSESIGGNKPATPTTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSCGNDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQAAEAEQAEREQRERQKERERELELEREREREHQQLIQQLRQQMAAAAAAAVAVAAVAAPAHPPPPDQSPPGLEASSDLPYKCHLCEFSFGERLQCLEHIKQLHAHEFALLLAKGAIETDAQLQHQQQQQLPAAGGAPHSDDEAAAVGTRSGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGGELDHQSDCSEDEQLLPCSPPSTPTPTNNNNNNNTCQNNNNNNNNNNNTSNSKQVLRELLGKANEWRVSRLGEHKENIAEATTTPSAATAAAAAATAAAAASAAAAAVASGDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535518;
90% Identity
iTF_00525357;
80% Identity
-