Dpar016040.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila parthenogenetica
Gene Symbol
-
Assembly
GCA_035047505.1
Location
JAWNPM010000242.1:6491566-6496169[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00086 0.064 13.9 2.1 1 23 208 230 208 230 0.97
2 26 0.00044 0.033 14.8 1.4 1 23 236 258 236 258 0.98
3 26 2 1.5e+02 3.3 0.5 2 20 290 308 289 311 0.90
4 26 0.025 1.9 9.3 1.9 1 23 388 411 388 411 0.93
5 26 2.7 2e+02 2.9 5.9 2 23 423 446 422 446 0.93
6 26 3.5 2.6e+02 2.5 0.6 1 20 452 471 452 473 0.92
7 26 0.00066 0.05 14.2 0.5 2 23 490 511 489 511 0.97
8 26 0.036 2.7 8.8 0.4 1 23 586 609 586 609 0.96
9 26 0.014 1.1 10.1 0.1 1 22 618 639 618 639 0.95
10 26 0.039 2.9 8.7 2.8 1 23 648 671 648 671 0.97
11 26 8.5e-05 0.0063 17.1 0.3 2 23 698 719 697 719 0.97
12 26 3.1e-05 0.0023 18.4 5.6 1 23 727 749 727 749 0.99
13 26 0.017 1.3 9.8 1.3 1 23 898 921 898 921 0.95
14 26 0.02 1.5 9.6 2.9 1 22 928 949 928 949 0.95
15 26 0.012 0.89 10.3 0.8 1 23 958 981 958 981 0.93
16 26 1.6e-05 0.0012 19.4 1.2 1 23 1006 1028 1006 1028 0.97
17 26 0.00014 0.01 16.4 0.9 1 23 1035 1057 1035 1057 0.98
18 26 0.0025 0.18 12.4 0.0 2 21 1084 1103 1083 1104 0.93
19 26 0.013 0.94 10.2 3.9 1 23 1149 1172 1149 1172 0.96
20 26 0.029 2.2 9.1 0.7 1 23 1209 1232 1209 1232 0.95
21 26 0.00097 0.073 13.7 3.5 1 23 1257 1280 1257 1280 0.97
22 26 1.4e-05 0.001 19.5 0.1 2 23 1309 1330 1308 1330 0.95
23 26 4.7e-05 0.0035 17.9 2.9 1 23 1336 1358 1336 1358 0.99
24 26 2.3e-06 0.00017 22.0 2.0 1 23 1364 1386 1364 1386 0.97
25 26 5.9e-08 4.4e-06 27.0 2.4 1 23 1392 1414 1392 1414 0.99
26 26 0.00073 0.055 14.1 0.3 1 22 1420 1441 1420 1444 0.91

Sequence Information

Coding Sequence
aTGTTGACGCACGACATATGTCGTACTTGTGCAGTGCACAATGCAGACTTGTTGGCGCTCTCAACGCATACTgagaaatatgcaaataaaagttattctGACATGTTGCATGAGTTAACACAAAACGATCCCTTGATGGAAAACTTGAATGAGAATTTACCCCAGCACTTGTGCGGCGACTGCCTGTGCAAGCTGGAAAGCGCCTATGCTTTTGTGTTGCAAGCACGTCAGGTACAGGAGCAACTGTTGAGCAAGATACGCGACTGTTTGGAAGAAACGCCCATTGACATAACCACGGAGCATATCAAGACAGAAACAGACATTACCTTGGACCAGGCGAAAGACGACGCCGAAGAAGACATCGCCATTGATTCGATGACACCTCTGAAGGTACAACCAGAGAGCGACACGGACAGCAGCCAGACAGCAGAAGATGCGGCCGACAATGATGTGCTAGACTTTAAGCCTCCGCAGTTGAGACGCAGCTGCCGCAAGCCAAAGGTTTCCACAGACAGCGAAAATGAAGCGTCTTATGAAAACGCGAGTGCCTTGCCGCCAAAGCGACGTCGAGGACGCCCACCGCGTCTTCCCCACAAGGAGACCACCAACAAGGATGGACGACATGTGTGCGAGGTGTGTGGAAAGACCTTCTCGTGGCATAGAGACATGCAGCGCCACGCTCGTGTGCACTACGAGCAAGCTGGCTATGTGTGTGATAGCTGCGGCAAGGAATTCATCCGCAAGGACAAGTACATGTTCCATATGCGATCCCACGAGAAGCGCCAGGCCAAGCAACAGGCTCTTCAATTAAGCCACGAGTGGCGCTTTGCTGAGCGTCTCTACAGTTCCGGGCGTCTCAAGTGCATTGAGTGCAAGCTGTGCGGCCTGAAATGCCAGAAGATTCAGGAGCTGCGCGAGCATCTCCCTATACATGCCAACATAGAAACCCTATCGAATCTCAGCCACCACAATGATGTGGTTCTGGAGCAGTTCGCCAACGACGCCAGACCATTGGACTTGCTGAATATAAGGCAGCAAGTAAGCGCAGACATAGCCCAGGGAAGCGCTTGCCTGGATAAGTACTGCTCTGTAGTGAATTGCCTTGGCTACGAGCTGTGCCTCAGCGACTCGGATGAAGAGTGTGCGGAAGAAACGCCTCCATACCAATGCCTCCCATGTAACACTAGCTTTTCCAGGAAGCATCGACTGATAAGCCACACGTTAGAGGAGCACACTCAACCGACCAGTGGGACGTTTCCTGGCCAGCGTTGCAGTCACTGTCAGATTGGCTTTGTGTGCGCCAAGTTGCTGGAGCAGCATCAGCGCACACAGTGTCACAATCCTCTAAAACGCTACACCTGCTTCAACTGTCCAGGAAAATTTATGTGGCCAGAGAATCTAAGGCAGCATGCGTGCTCCAGATCACCAGAGGTCGTGGAGCAGAATCGAACTCAAGGCCGAAAGATTCAGTGTTGTCTCTGCGATGAGCAGTTCCCAAGAATGTCCGCTTTACGTGCTCATCTGCTCTCCCACGATGATGGAAGCAGTAGCATCAACTGGGATAAATTTGCTAGCGTCTTTGGCGGTCAGTGCCCTGAAGCTATCAACTGGGATCAGAACGAGATCAGCAAACGGATTGTCAGTGACTTTGAAGCACAGGATTATGGAAAGTATTTCAATGCCTGCACAGGCAGCGGACAGGAGCTGGATTTCCTTGATTCCGACACAGATTTAAGCGACTCCTCAGCTGCTGAGCACTCCTGTGAACTGTGCGGTGTGAGCACTCCACGCCTGACTATGCTCTTGGGGCATCAGCAGAAGCTTCACTCAGAGCAGCAGGATACACTGCCTCATGTCTGCGCCACATGTGGACTGCGATATGTGTCGGAGGCGCTGCTGGAACAACATCGACGTCGCATCTGTAACAAACGTCATGCAAAATACCAGTGTGAGTACTGTAATCTTCGCTTTATATGGCAGTCGAACCATGAACGGCATATGAAACTGCGCCACGATGAGAAGGCAGGATCTGCTCTTGATGAGATGCCTAACACAAGGCTAAGGAGCAAACGCCAAGAAGCTGCCAAACTGCAGTGTAGTGAATGCGATAAGGTTTTCATCTGGCCCAAGGATCTAACGCGGCACAAGCGCATCCACCAGCCGCAGGCATCGGCACAGTACGAGTGCAGCCACTGTGAGCGCAAGTTCCACCGCAAGGATGACCTCAAGTCCCATCTGCGCGTTCATGGAGACCAACAACTGGAGGGAACTGCAAGCATTGCTGACAGCGAACCTGATTCTTCCCTATGGCCAATGGTGTGGACACAGTTGTGCCAACCGAATGGATGCAAGCAGATCCAGTGTATGATCTGTCTCTCTCGGCACTCAAAGATCGCTGATCTCCGCACGCATCTGCTAAAGCATCAGTTTGTGGTGGACTTTGTTCAGGAGCGTGGCCAGCCGGCGGGCATTGCTACCATTTGGCGGGCTCTGTATCCGGAGCAGGTGCCCACTCTGGACCGGCAGCAACTGGTTGAGCGCATTCAGAGGGATGTGGGCGAGGGTCTTGAGTTGGAAAGATTTGTTTCCATAACCAATGAGGCGAGCATTGAGCTCAGTCTGGACAGCAGTGAAACCGATACGGATTCCGACACAGGCTTAGCCCTAACCGATGTGGTTCCTAACTCCCAGTACAGCTGTGATCTTTGCCAGCTGAAACTTCCACGGAAACATCAGCTCTATGCCCACCAGTTGGAGCAGCACACCTGGCAACAGGCAACGCACAATTGTACACACTGCCAGGCCAGATTCATCAGTGAACAGTTGCTGGAGCATCACTACAGAACTCTCTGTCGCAATCCGCACAAGCGTTTCCTCTGCCGCAAGTGTCCGTTCCGCTTCCGCTGGCGGGAAAATCTGAAGCAGCACATGGATGTGGCCCACCAGGAGCCTACGGGGGAGCAGACAAGGTTGGGCCTTCAGCTGAATGGATCGACTCTGCTGCCAGTGGTCAGCTACGACTGCGGGGAGTGCAATCGAAGCTTCAAGATGCAGAAGGATCTCACCCGGCACACCCTGATGCACACCAAGGATTCGAGCATTTATCGTTGTCGCTGGTGTGCCCGACGCTTCTATCGCCAGGCTAATCTCTTGCAGCACATTGAGCGACATGGCATTCATGCCTCCCAGCTGCCCTACGCCGAGACGTTGCTTAACGCCAGCCGGCATCCCAACGGCCAAAAGTGCATCCAGTGCAAGGTCTGCGATATAAACTTTCCCACAATCTCCGCACTGCGCGCCCACTTGTCTTCTACACCGCAGGAATCTCATCATGGCATAAAATCTATGCTGAACTACTCCATTACCAATCAGCAGGGCTTCGAACTTCACTTGGACGACTCTGAAACGGACGTGGAGGTAAAGCCACCTGGCACGCCCAAGCACTACACCTGCGGCATGTGCCAACTCAGGTGTGTGCGGAAGTACGAGCTACACCAGCATCAGCAGGCCATGCACCGTCTGGAGCGTATCACCGAGGGATGTGATCACTGCATCTTTAAGAGCGTTTGCCCCGATCTCATTGCTTATCACCAGCGAACGCAGTGCGGCAACACGGAAAAGCAGTTCAAGTGCGTCCACTGTGGATACAAGTTCATGTGGGAAGCGAATCTGCTGCTGCACATACAGTTGCAGCACTCCAGCCAGGATGGCCACGATGAGGGATCAACTGCGCCTGTTCCAGAAGGCTCATCCACAGAGTGTCACATCTTTCAGTGTGGCCAGTGTCCACGCAAGTATAATCGTAAGGATCGGTTGACAGCGCATGTGAAGAAGTGTCATGCACCAGGAGCAGTTGGTTCTGCTTTACAGAGTCCAGCAAAGACAACGACGCCTCCAACTGTAGCCAAGCAGCAGAAGAGCTTTCTCTGCGCCTTCTGTGGAAAGGCCGTGAGCTCCTCCTCAAATCTGATCATTCACATACGTCGCCACACTGGCGAGAAGCCCTTCAAGTGCGACTACTGCGACATGGCATTTCCGCGCTCCTCTGATCTGCAGTGCCATCGGCGCACCCACACAGGCGAGCGTCCTCATGTATGCACCGTGTGCCAGAAGGGATTCGCCCGTTCCTACAAGCTGCAGCAGCACATGCGAATCCACAATGGGGAGCGGCCCTACAAGTGCACCTACTGTGACAAGAGCTTCACCCAGTCCAACGATTTGACGCTTCACATACGACGCCACACCGGGGAGAGACCATATCAGTGTGACACCTGCGGCGAACGCTTCATACAGGGCACGGCACTCAAGAACCACCGGCAACAGAATGGACATTTCGAGGCTAGTGTGGAACCGACTGcagataattaa
Protein Sequence
MLTHDICRTCAVHNADLLALSTHTEKYANKSYSDMLHELTQNDPLMENLNENLPQHLCGDCLCKLESAYAFVLQARQVQEQLLSKIRDCLEETPIDITTEHIKTETDITLDQAKDDAEEDIAIDSMTPLKVQPESDTDSSQTAEDAADNDVLDFKPPQLRRSCRKPKVSTDSENEASYENASALPPKRRRGRPPRLPHKETTNKDGRHVCEVCGKTFSWHRDMQRHARVHYEQAGYVCDSCGKEFIRKDKYMFHMRSHEKRQAKQQALQLSHEWRFAERLYSSGRLKCIECKLCGLKCQKIQELREHLPIHANIETLSNLSHHNDVVLEQFANDARPLDLLNIRQQVSADIAQGSACLDKYCSVVNCLGYELCLSDSDEECAEETPPYQCLPCNTSFSRKHRLISHTLEEHTQPTSGTFPGQRCSHCQIGFVCAKLLEQHQRTQCHNPLKRYTCFNCPGKFMWPENLRQHACSRSPEVVEQNRTQGRKIQCCLCDEQFPRMSALRAHLLSHDDGSSSINWDKFASVFGGQCPEAINWDQNEISKRIVSDFEAQDYGKYFNACTGSGQELDFLDSDTDLSDSSAAEHSCELCGVSTPRLTMLLGHQQKLHSEQQDTLPHVCATCGLRYVSEALLEQHRRRICNKRHAKYQCEYCNLRFIWQSNHERHMKLRHDEKAGSALDEMPNTRLRSKRQEAAKLQCSECDKVFIWPKDLTRHKRIHQPQASAQYECSHCERKFHRKDDLKSHLRVHGDQQLEGTASIADSEPDSSLWPMVWTQLCQPNGCKQIQCMICLSRHSKIADLRTHLLKHQFVVDFVQERGQPAGIATIWRALYPEQVPTLDRQQLVERIQRDVGEGLELERFVSITNEASIELSLDSSETDTDSDTGLALTDVVPNSQYSCDLCQLKLPRKHQLYAHQLEQHTWQQATHNCTHCQARFISEQLLEHHYRTLCRNPHKRFLCRKCPFRFRWRENLKQHMDVAHQEPTGEQTRLGLQLNGSTLLPVVSYDCGECNRSFKMQKDLTRHTLMHTKDSSIYRCRWCARRFYRQANLLQHIERHGIHASQLPYAETLLNASRHPNGQKCIQCKVCDINFPTISALRAHLSSTPQESHHGIKSMLNYSITNQQGFELHLDDSETDVEVKPPGTPKHYTCGMCQLRCVRKYELHQHQQAMHRLERITEGCDHCIFKSVCPDLIAYHQRTQCGNTEKQFKCVHCGYKFMWEANLLLHIQLQHSSQDGHDEGSTAPVPEGSSTECHIFQCGQCPRKYNRKDRLTAHVKKCHAPGAVGSALQSPAKTTTPPTVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRQQNGHFEASVEPTADN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00478873; iTF_00471014;
90% Identity
-
80% Identity
-