Dpar013864.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- dmd-4
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000187.1:3403120-3405840[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 5.4e-22 77.5 9.3 1 47 39 85 39 85 0.98 2 2 0.3 1.5e+03 -0.7 0.2 23 32 306 315 298 319 0.78
Sequence Information
- Coding Sequence
- ATGGCTAATGAGACTCTGGATAATCATTTCAGTACAAAAAGATCCCGTTTATGCCAAAACCCTAATAAAGTTGGAAAATCAGGTTCTGTTAATCAGCTGTCGAAATCTTCAAATCGGGTGCCAAAATGTGCCCGTTGCCGAAACCACGGCATTATCTCCGAGTTACGCGGCCACAAAAAACTATGCACCTACAAGAATTGCAAGTGTGCTAAGTGTGTCCTGATCTTCGAGCGTCAACGCATTATGGCAGCACAGGTTGCCCTCAAGCGTCAACAGGCAGTGGAGGATGCGATTGCGCTACGTCTGGTGGCCAATAAGACAGGGCGAAAAATCGATTCACTGCCTCCGGGAAGTATCTACGGGCTAACGGTAACGCAACCCAAGGAGCAGTCGACTGAGGCACACAGTCCCAGACTCCGCGAGGAAGAGACCAGAGACCTGGAACAAAAGAAGCAGGAGAGGCACTCGCGTGGTGTAGAGCCAGAGTTGGTAGCCGTGGCCCAGGATCTGAGTGCTCCACGGCGGGAGAACGTCTCGCAAACAGCCATCGACATGCTGGCCCAGCTCTTCCCGCAGCGCAAACGTTCAGTTTTGGAACTGGTTCTCAAGCGCTGCGACTTGGACCTCATCCGTGCCATCGAAGACATTTCTCCGCCGATGGAACAGGCGCCTAGAGAATCCCTCCTCCCGCCTTCGCTGCCACTGCCGGCACATCCGCTGCCGACGTCAATGCAACTGGCTCTGCCACCGAGGAGCAGCGCCTTCAGACCGGTCATGGCCGATCAGTATTCCGAGAAATCTTCAGCCGCCACCGCTACTTCCGCCACCACCTCCGCCGCCATTTGCGCCTATCCCAAATGGTTCGTGCCCCTCTCGTTCCCCGTCACTATGGGACACCTCTCAAACCTCGCACCACGTTGCACTTTGCCCAACTGCAACTGTTTGGAGAGCTACCAATTCCATTAG
- Protein Sequence
- MANETLDNHFSTKRSRLCQNPNKVGKSGSVNQLSKSSNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDSLPPGSIYGLTVTQPKEQSTEAHSPRLREEETRDLEQKKQERHSRGVEPELVAVAQDLSAPRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIEDISPPMEQAPRESLLPPSLPLPAHPLPTSMQLALPPRSSAFRPVMADQYSEKSSAATATSATTSAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCNCLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00478746;
- 90% Identity
- -
- 80% Identity
- -