Basic Information

Insect: Drosophila paranaensis
Gene Symbol: stc
Assembly: GCA_035047545.1
Location: JAWNPL010000161.1:254857-258279[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.3e+04 -3.6 0.5 15 18 356 359 355 360 0.79

2 16 2 1.8e+04 -4.1 1.6 15 19 383 387 382 387 0.81

3 16 0.056 5.1e+02 0.8 2.0 4 11 416 423 415 424 0.90

4 16 5.8e-07 0.0053 16.8 15.1 1 19 428 445 428 445 0.93

5 16 1.7 1.5e+04 -3.9 0.9 6 10 471 475 470 475 0.88

6 16 2.2e-08 0.0002 21.3 13.6 1 18 481 498 481 499 0.98

7 16 1.7 1.5e+04 -3.9 1.5 7 13 503 509 503 510 0.75

8 16 2 1.8e+04 -9.8 6.5 6 9 529 532 526 533 0.49

9 16 4.4e-09 3.9e-05 23.6 15.7 1 19 539 557 539 557 0.98

10 16 2.4e-05 0.21 11.6 17.0 4 19 605 620 598 620 0.88

11 16 0.065 5.9e+02 0.6 11.7 1 11 660 670 660 682 0.79

12 16 2.8e-10 2.5e-06 27.4 15.1 1 18 687 704 687 705 0.97

13 16 2 1.8e+04 -4.4 1.2 6 10 734 738 734 738 0.88

14 16 2 1.8e+04 -6.7 9.7 10 18 752 761 742 762 0.80

15 16 9.5e-08 0.00086 19.3 14.8 1 16 798 813 798 823 0.89

16 16 5.2e-06 0.047 13.7 12.0 1 19 830 849 830 849 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.3e+04	-3.6	0.5	15	18	356	359	355	360	0.79
2	16	2	1.8e+04	-4.1	1.6	15	19	383	387	382	387	0.81
3	16	0.056	5.1e+02	0.8	2.0	4	11	416	423	415	424	0.90
4	16	5.8e-07	0.0053	16.8	15.1	1	19	428	445	428	445	0.93
5	16	1.7	1.5e+04	-3.9	0.9	6	10	471	475	470	475	0.88
6	16	2.2e-08	0.0002	21.3	13.6	1	18	481	498	481	499	0.98
7	16	1.7	1.5e+04	-3.9	1.5	7	13	503	509	503	510	0.75
8	16	2	1.8e+04	-9.8	6.5	6	9	529	532	526	533	0.49
9	16	4.4e-09	3.9e-05	23.6	15.7	1	19	539	557	539	557	0.98
10	16	2.4e-05	0.21	11.6	17.0	4	19	605	620	598	620	0.88
11	16	0.065	5.9e+02	0.6	11.7	1	11	660	670	660	682	0.79
12	16	2.8e-10	2.5e-06	27.4	15.1	1	18	687	704	687	705	0.97
13	16	2	1.8e+04	-4.4	1.2	6	10	734	738	734	738	0.88
14	16	2	1.8e+04	-6.7	9.7	10	18	752	761	742	762	0.80
15	16	9.5e-08	0.00086	19.3	14.8	1	16	798	813	798	823	0.89
16	16	5.2e-06	0.047	13.7	12.0	1	19	830	849	830	849	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcaacaacagcagcagcagccacagccacagccacagcagcagctaacaaATGGAGCTGGAGACTCAACTAGCTCCAATGgccacaataataataataattatgtaaattttaatcaatttattagTCAACACAAtttggccagctccagctacaacgtgggcggtggcggcggcgcctTCGGCCtaacgcccagcagcagcagcggctccaATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACGGTTACAATGCAGCGGGCGGCGCTGTTGCCTATCCTGTTGCCTTTGCAAATTCTTATACATCCTTTGGCCCAAATCCAtttgctgcttcagctgcctcCTCTACGACTGGCTACGACTTCAGCGCTTCCAAGCTGCAGCCAACAGCGCCCGAATTTGTGCCCAATTTTGCTAAGCTCAGtttagcagcagcaccaacggcagcaacagccgcagcgcCATCTACAGAGAATGCCTCTGTTAAGAAccataacagcaacaacaacaacaacaacactgccaatggagtagcagcagctgggaactctgcacagcagcagcagccgcatcgAGCGGATCAGAGGCAAGCAAAGCcgcaaggcagcagcagcggtggtggcggtggtggcggcggtcGTCAGCAGCGCCGCAACGATTATCGCGAGGAACGCAATGAGGAGCGCTATGAGCGCGGCAAAAAGccgcagaagcagcagcgctACGATAATCATCGCAGCAATAAGCGCCGCGACGACTGGAATCGCAATCGGGATCGCATCAATGGCTATTCGCGTGCCGCCGAGGAGCTggacaccagcaacagcaatgacaGCGCACAGCCCTCGCCggagaagcagcaacaacaacagcaacagcaacaacatcatcatcaacagcaaatCTCGCCCAGGTGCGCACCTGACCTGGAGAAGCTGTCGCAGCGTGAGAAGCTAATGCGGGACATTGAGCAGCGCCGGCTGGAGTGCCTCGTGTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGCCAGAACTGTTATCACGTGCTGCACTTGAAGTGCACCATCACCTGGGCGAGCAGCTCGAAGTCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGACTATCTCTGCTTCTGCGGGAAGCTCAAGAATCCGCCGCTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGTTGTGCTGCCGCGTCGAGGGCTGCAGCCATGCGTGCACTTTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCAAATGTGAGTCggagctgtggctgcggccgCACCTCCAAGCTGATGCAGTGCGCCATgaagcagccgctgcagtGCGAAGCCATCTGCGATAAGCTCCTCAACTGTGGCGAGCATCGCTGCCAGCAGCCCTGCCATGCGGGCAAGTGCGAGGCGTGTGCGGAGCAAGTGCAGCAGAACTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGGGAGAGCCAGGACAAGCGCTGCTACTCCTGCAAGGAGTGTTGCGGCAAGCCGCTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGCCATCCCGGCGAGTGTCGCCCCTGCAAGCTCAGTCCCACGCAGATCACCAGCTGCCCCTGCGGCAAGCTGCCTGTGCCGGCCTCGCAGCGCACCAGCTGCCTCGACCCGGTGCCCACGTGCGAGGGCACGTGCAGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGCCACCTGGGCCAGTGTCCGCCCTGCCCCAAGCAGACGGCTGTGAAGTGTCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGGCAGCTGTCCACGCGGGCGGACGACGCGCGCTGCAAGCGCCGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGCTGCATCGACATCGACCACGCCTGCCCCTTGCCCTGCAACCGCACCCTGAGCTGCGGGCGGCACAAGTGCGACCAGCCCTGCCACCGGGGCAACTGCCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAGGTCATCTACCCGCCGGTGCCCTGCGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGCTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCATGGCAACCACGAGCAGCGCAAGACCATACCCTGTTCCCAGGCCAGCTTCAGCTGTGGCCTGGCCTGCGGCAAGCCCCTGAGCTGCGGCCGGCACAAGTGCATCCGGCCCTGCCACGAGGGCGACTGCCAGCAGGCGGGCGAGCAGTGCCGCCAGAGCTGCACCAAGCCGCGTCTCCTGTGCGGCCACAAGTGCGCCGCCGTCTGCCACGAGAGCGACTGCCCGGAAACACCCTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAACCGCAAGCAGAACCGCAGCTGCCAGGAGCTGGCGCGCGAGCACAGCCGCATTGCCACCGCCCAgctggcctcctccatggCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAGATTCTGGCGcccaacaaaaataacaagtcCAATAAAACCTTGGACTGCAATGATGAGTGTCGTCTGCTGGAGCGCAATCGTCGTCTGGCCATTGGCCTGCAGTCCCGCAATCCGGATGCGCAGCTGAAGTCGCTGACCAAGTACTCGGAGTTCTTGCGTGGATTTGCCAAGCGCAACCCGTCGCTGACGAAGAGCGTCTATGAAACGTTGAGCGATCTGGTCAAGTTGGCCAAGGAGAGCAAACAGAAGTCGCGTAGTCACTCCTTTCCCACCATGAATCGCGAGAAGCGGCAGCTGGTGCATGAGCTGTGCGAAGTATTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCCAATCGCAATGTCGTCGCCACGGCGCACAAGGAACGCtgCTGGCTACCGGCAACGAGCATCATGGAGGTGCTGGCACGTGAGTCGGGGCAGCGACGCGTGCCCGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQQQPQPQPQQQLTNGAGDSTSSNGHNNNNNYVNFNQFISQHNLASSSYNVGGGGGAFGLTPSSSSGSNLYAPHFYGNQNGDGYNAAGGAVAYPVAFANSYTSFGPNPFAASAASSTTGYDFSASKLQPTAPEFVPNFAKLSLAAAPTAATAAAPSTENASVKNHNSNNNNNNTANGVAAAGNSAQQQQPHRADQRQAKPQGSSSGGGGGGGGRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAAEELDTSNSNDSAQPSPEKQQQQQQQQQHHHQQQISPRCAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQNCHCGKQQREVLCTRESQDKRCYSCKECCGKPLPCGNHKCKDSCHPGECRPCKLSPTQITSCPCGKLPVPASQRTSCLDPVPTCEGTCSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLSCGRHKCIRPCHEGDCQQAGEQCRQSCTKPRLLCGHKCAAVCHESDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPSLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00587084;
80% Identity: -