Basic Information

Insect: Drosophila paranaensis
Gene Symbol: -
Assembly: GCA_035047545.1
Location: JAWNPL010000173.1:19177329-19181230[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00039 0.026 15.0 0.1 1 23 161 184 161 184 0.96

2 14 0.00022 0.015 15.8 2.3 2 23 233 255 232 255 0.97

3 14 0.0052 0.35 11.4 0.9 1 23 361 384 361 384 0.93

4 14 0.068 4.6 7.9 6.9 2 23 433 455 432 456 0.95

5 14 0.0026 0.18 12.4 0.4 1 23 519 542 519 542 0.88

6 14 3.1 2.1e+02 2.7 0.0 2 14 561 573 560 577 0.82

7 14 0.00073 0.049 14.1 3.3 2 23 593 615 593 615 0.96

8 14 0.00086 0.058 13.9 0.1 1 23 715 738 715 738 0.95

9 14 9.7e-05 0.0066 16.9 0.4 1 23 790 813 790 813 0.93

10 14 0.0045 0.31 11.6 1.5 2 23 863 885 862 885 0.95

11 14 0.0013 0.088 13.3 1.4 1 23 973 996 973 996 0.92

12 14 0.14 9.8 6.9 1.5 1 21 1048 1068 1048 1069 0.95

13 14 0.32 21 5.8 0.0 2 23 1112 1136 1111 1136 0.81

14 14 7.3 4.9e+02 1.5 0.4 1 10 1154 1163 1154 1178 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00039	0.026	15.0	0.1	1	23	161	184	161	184	0.96
2	14	0.00022	0.015	15.8	2.3	2	23	233	255	232	255	0.97
3	14	0.0052	0.35	11.4	0.9	1	23	361	384	361	384	0.93
4	14	0.068	4.6	7.9	6.9	2	23	433	455	432	456	0.95
5	14	0.0026	0.18	12.4	0.4	1	23	519	542	519	542	0.88
6	14	3.1	2.1e+02	2.7	0.0	2	14	561	573	560	577	0.82
7	14	0.00073	0.049	14.1	3.3	2	23	593	615	593	615	0.96
8	14	0.00086	0.058	13.9	0.1	1	23	715	738	715	738	0.95
9	14	9.7e-05	0.0066	16.9	0.4	1	23	790	813	790	813	0.93
10	14	0.0045	0.31	11.6	1.5	2	23	863	885	862	885	0.95
11	14	0.0013	0.088	13.3	1.4	1	23	973	996	973	996	0.92
12	14	0.14	9.8	6.9	1.5	1	21	1048	1068	1048	1069	0.95
13	14	0.32	21	5.8	0.0	2	23	1112	1136	1111	1136	0.81
14	14	7.3	4.9e+02	1.5	0.4	1	10	1154	1163	1154	1178	0.74

Sequence Information

Coding Sequence: ATGGAAGGTATGGATCTGTGGACGTCAATGTTTTCAGCCGATTTCGATGAGGGTGATGGTGAGGTGCAGAGCCATAATAATGGCAATAACGCGCTCGCAGACGAATTTATAGGCGAAAAGGAGGAGGACGAACAGGCGGCTGAAGAGGATGAGGGCTCGGCCGATGAAAATAGCAGCAAACGAAAAGGACACGACCCTGATGACGATGCCATATTTGATTTTGAGCTAGAGCCTATTGTCAGCATTGCGGAACCAGAACTGGAACCGTTGCCTAGACTACGGGCGGCCCCTCTGCAGCCACCAATGCCAATGAGTCCAGCCGTCCGAGCACAGCACCGTCACTCGTTGCCAGCCTCGTTTGGCTCCCAGCAGATGGTGGGCCGTGGCGGTTCAGGGACACCATCCACACGGCCAACGACCTCTCAAATCAATGCCACCGATGAGAACGGTTTGCCCATCAATTATGAGCTGGGGGTTACCTATATATGCCCGGCCTGCGGTGCAGAATATCGACAGCAGGACTTGTGGAAGCGCCACATGAACCAGGTGCATCAGTACAATACTCGACGTGGTCTAAATTTCGTGGCCATTGACAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGGATCGCAATGCACAGCCGAGAGAATTTGCTTAAACACAAGTTCACCCATTTGCCATTTCGGTGCACCAAGTGCCACATATGCAAACGCGAGTACAAATACAGGCAGGACCTGATGGTACATCTGCGAATGGTGCACTGCGATGAGGTGGTGGCCATGATGCGTGGCGGTAAATTAAGTGCCGGGCGCAAGACGCGTGTTCGCGAACCGCGCATCGATCAGCGCCGCGAACATTATGGACAGGCTCATGACGATGATGGCATAGCGGTCAAGAATGAGCTGATGGACGCGGACGACAATGCGGAACTAGTTGAAGGGTCCAATCATGACTTGGACGATGAACACAGTCTCAGTTCCACTCAAGCGGTTAAAAAGAAGCGTACTACTCCTGGTGCACTCAATGGAAGCGTGAATGACGGCGGTGCAGCGGATATTTGCGAGgactatatacactatatgtGTCCGGACTGTGGCACCGATTGTGATACGCACGCCCAATGGAATCAGCATATTGAATTTGTGCACGACTACGTCAGTCGAAGGGGCCTGAACTTTCGCTGCGTGGATATGCAAATGCAGTGCCTCGAGTGCGAGGAGTTTGTCATTCCGAACACGATTAAAACGCTGCGCGCTCACAAGTTTGGCCACTTGCCCCAACCGGAATGGATGCGCTGCAAGCTGTGCTATAAGGGCTTCACAGAACATCACGAACTCCGAACACATCTTCTTAAACAGCATCATTTGGAAACCTTAATGCCCGAGaaggaagaggaggagcagcagtcGTTGGCTATATCCAGCGTGGGTGATGAGAATGAGGGTAATCCTGGTACTGTCTGCGATGATGAAACTTCATTGCATTGGGATGATGTGCCTCGTCGTGGTGGTCGCATTGGGAGCGATGATATATACGAGCCACATATTGATTACCTATGTCCGCAGTGCGGCAAAGAGTTCATAGAAAAGAAACATTGGCGCATGCATGTTGTTCAAGTGCACGGGATGAATGATCTGACCAAGTTGAATTTCGAGGTGATCAGTGACATCCAGTTGAGGTGCACCGAATGCGATAAGATAATAACGAATGCATATGGCATACAGAATGCACAGCAACACAGGACGACGCATTTGCCCTACAAAGCGTACGCGAGATGCCGCAAATGCCATAAGTCCTATACGGATCGCAAGGGTCTCGTCAAGCATTTGGCTACATACCATCGCGTTGGCTACGAGTCGCGTAAGACGGTAGGAACAGGCGCTGCCACTATGACTCCAACCAAATTACAGACGCCACGCAGGCAAATTGTCACCGTTGCCAACGAGACTTACGAGATTATTTATTTGGACGAGGATCAATCGCCGCCTagcaacaataatttaaatgaagagAATGATTTTGGCGAGCAAATGCAAGCGGACGATGATGATTATGCAGTAGGTAGCACAAGTGGCGTCCTGATGGGACGCCAGCCGCAagcagctactgctgctgcgcccAATCCTAACCATAATCGTTATAAGTGCGTAGATTGCGGATCGCTCTTTGCCACACAGACGGCGTTAAAGACGCACATCAGCGAGGAACATGATTTTATGGACACGCAATACAGCGAGAAAAAATTTGACGATGCTGAGCCCACGGAGGAGGCAACTGCAGTGCCAGTTGCCGTTTCAACCACTGCAGGTAATACGCCTGTAAAGAACACCTCAGGCGCCTCCACTATTGAGCAGAACTATATATTCCTGTGCCCGTCGTGCGGCAAGGCCTACAAGACGCAGTTCGAGTGGCGACGCCACATAAACGAGCAGCACAATTTCGACAAACGgcagtatttaaatatgcgcCAGCTGGACAAATATCGCTATCAGTGCACCCTTTGCAAAGATATTGTATGCAATTCAAAGCTTAAAGGCCTGCAGGATCATCATTTTCGTCATTTGCCTTACCGGCTGTACTTGAAGTGCCTGGTGTGCGGCACCTGCTACAATCACAAACCCAACATAGCAGCGCATCTCCGCGCGCGACACAACATCTATGAGCGCGAGTCCTCGTCTTGGCGTGAGCAGCATCAAAAGACCCAGAATGGTGACGAGCAGCCTAAGTATAAGGATAAGGATAGGGATACgcaagttgctgttgccactggCACTACTTCTCCTTCACCTACGCCCGGCAGTAGTCGCACACTCAAGCCACAGCCGGGCGTGCTGCCCACGCGACCCGCAGGGCTCAATACATTGGAGGATAGCATATCGTATCACAATGCCGTGGATCTGGACTTTATTACCTACTATTGTCCCAAGTGCAATAAGAACTTTGACTCGCACGCCTTTTGGCGTAAGCATATCGTCGAGGTACATAACTATAATAGTCGGCAAGGCCTGAACTTTCGCCAGATTGACAACCATCACTATCTGTGCCTGGAATGCTATAAGCGTGTGACGGTGACGCACACTAAGGGCGCCATTGGGCAGCTACAGTCGCACAAGTTCCGGCACTTGCCGTATCGCTCCTTCAAGTGCTTGACCTGCAGCGGAGAATTTGTGCGCAAGCAAATGTTCTTCAAGCACTTGAACCGCGACACTAATCGTTGCGATAACAAGCCATTAAGTGGCCAGGAGAATGATGAGGATACAACCGATCAGCCGGACAGGCCAGCTACCTTGGGGTCGAAAGAGACACTCGATGTCGCGACTTACCGTTTGATGTGTCCAGAGTGCGGCGATGGGTTTACCACAAGCAGCAAAGCTCTGTGGCGAGAGCACATTAACATCCAGCACAGTCTGGGGAAGCGGGAGATGCTGCACATGCGCAAGCTAGGCGATGAACTTTATCGCTGTACAGATTgcgaggagcagctgcaaaCGAAGCACCTGCGAGTGCTACAGGAACATCGCTTCCAGCATTTACCCTATGCCGCATATATACGCTGCCAGCTATGCGAACAACAGTCGGCGGATGGACTGGGTCatggtgcagctgctgcgggaTTACATAATATGCGGGAACTGCAACAGCACATGCGCAACGAGCATCCGGATGTGATTGAGCAGGACGAACGAATGCAAGCACTGctcgacgaggaggaggataGTCAGCAGCAAGCGGCTAGCGATGAAGCAACAGACAGTGGACTATatatgccgctgccgccgcattTGCTGGACGATGATGTGGAGGACATGGAGTTCGAGGAACAGTATCTGCTAGGTTAA
Protein Sequence: MEGMDLWTSMFSADFDEGDGEVQSHNNGNNALADEFIGEKEEDEQAAEEDEGSADENSSKRKGHDPDDDAIFDFELEPIVSIAEPELEPLPRLRAAPLQPPMPMSPAVRAQHRHSLPASFGSQQMVGRGGSGTPSTRPTTSQINATDENGLPINYELGVTYICPACGAEYRQQDLWKRHMNQVHQYNTRRGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPFRCTKCHICKREYKYRQDLMVHLRMVHCDEVVAMMRGGKLSAGRKTRVREPRIDQRREHYGQAHDDDGIAVKNELMDADDNAELVEGSNHDLDDEHSLSSTQAVKKKRTTPGALNGSVNDGGAADICEDYIHYMCPDCGTDCDTHAQWNQHIEFVHDYVSRRGLNFRCVDMQMQCLECEEFVIPNTIKTLRAHKFGHLPQPEWMRCKLCYKGFTEHHELRTHLLKQHHLETLMPEKEEEEQQSLAISSVGDENEGNPGTVCDDETSLHWDDVPRRGGRIGSDDIYEPHIDYLCPQCGKEFIEKKHWRMHVVQVHGMNDLTKLNFEVISDIQLRCTECDKIITNAYGIQNAQQHRTTHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYESRKTVGTGAATMTPTKLQTPRRQIVTVANETYEIIYLDEDQSPPSNNNLNEENDFGEQMQADDDDYAVGSTSGVLMGRQPQAATAAAPNPNHNRYKCVDCGSLFATQTALKTHISEEHDFMDTQYSEKKFDDAEPTEEATAVPVAVSTTAGNTPVKNTSGASTIEQNYIFLCPSCGKAYKTQFEWRRHINEQHNFDKRQYLNMRQLDKYRYQCTLCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRARHNIYERESSSWREQHQKTQNGDEQPKYKDKDRDTQVAVATGTTSPSPTPGSSRTLKPQPGVLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEVHNYNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGEFVRKQMFFKHLNRDTNRCDNKPLSGQENDEDTTDQPDRPATLGSKETLDVATYRLMCPECGDGFTTSSKALWREHINIQHSLGKREMLHMRKLGDELYRCTDCEEQLQTKHLRVLQEHRFQHLPYAAYIRCQLCEQQSADGLGHGAAAAGLHNMRELQQHMRNEHPDVIEQDERMQALLDEEEDSQQQAASDEATDSGLYMPLPPHLLDDDVEDMEFEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00532646;
90% Identity: iTF_00532646;
80% Identity: -