Dpar011033.1
Basic Information
- Insect
- Drosophila paranaensis
- Gene Symbol
- dmrt3a
- Assembly
- GCA_035047545.1
- Location
- JAWNPL010000173.1:3141531-3142516[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-22 3.7e-19 68.4 11.9 1 47 7 53 7 53 0.98 2 2 3.6 1.3e+04 -3.8 0.0 16 21 122 127 119 128 0.75
Sequence Information
- Coding Sequence
- ATGCCTGCGTTCATCAAGCGCACGCCCAAGTGTGCGCGCTGCCGCAACCATGGCTGGATCAGCATCTTGAGGGGCCACAAGTACTTCTGTCGCTGGCGCAGCTGCGTCTGCACCAAGTGTCGCTTCGTCATGGAGCGTCAGCGGCGAATGGCCGCCAAGGTCGCCTCGCATCGCCAGCAGGCGCTGGAGAGAGCCGGCAGGCTTGTGCATCAGCAGCTCCTGTATAGGTATCCCACAGCGTCCGACAGCAGCCAacgccaacagcagccgcagcaggcgAGATTCCCTAACAAGTGGACACTGGGTCCTTCCAATCTGGACGTTGGCTTGGCGCGGAATGAGGCCGCGGCTCAAAACTTGAGCCTGAAGAAGGGCCACAGCAACCCGAGCTCACCTGTCGAGCACATGCATCTGTTGCGCTCCTTGGACaacggccacgcccagctcTTTATGCCCTATCATCACTCGCAGTTACTAGCCGCGGGGCTGTCCACGCAGCTGCCCCAGCTACACCCACAGCAGCGCTCTCCAATAGACGTTTTATTGCGCGTCTTTCCCAATCGTCGGCGCGGGGATGTGGAGCAAGTGATGCAGCATTTCAATGGAGATGTCCTGCAGGCCATGGAATGGATGTTAGCTGGCGAGGATCTGACGCAGTCCCCCTCACCCCCATTGGCCATGAACTCCGCCTTCTCGCAGGTGGTCCCGCCCCTCGTCTTCggcccacccacccactcgcaTCCCTTCATGCCGGGCCAGCTCAATCAGCATCATTTGCTCTCCTCGATCCACAAGAGCAGCCCACAAGTCCAAGGTTATTGCAGCGTTCCTCCCTTTGAGCCCTAG
- Protein Sequence
- MPAFIKRTPKCARCRNHGWISILRGHKYFCRWRSCVCTKCRFVMERQRRMAAKVASHRQQALERAGRLVHQQLLYRYPTASDSSQRQQQPQQARFPNKWTLGPSNLDVGLARNEAAAQNLSLKKGHSNPSSPVEHMHLLRSLDNGHAQLFMPYHHSQLLAAGLSTQLPQLHPQQRSPIDVLLRVFPNRRRGDVEQVMQHFNGDVLQAMEWMLAGEDLTQSPSPPLAMNSAFSQVVPPLVFGPPTHSHPFMPGQLNQHHLLSSIHKSSPQVQGYCSVPPFEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00586694;
- 90% Identity
- iTF_00586694;
- 80% Identity
- -