Dpar006675.1
Basic Information
- Insect
- Drosophila paramelanica
- Gene Symbol
- -
- Assembly
- GCA_035043915.1
- Location
- JAWNMO010000545.1:949723-956022[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.079 4.9 7.7 0.4 1 23 1289 1312 1289 1312 0.96 2 13 8 4.9e+02 1.4 0.2 1 23 1476 1498 1476 1498 0.91 3 13 0.00018 0.011 16.1 2.7 2 23 1501 1522 1501 1522 0.97 4 13 6.9e-05 0.0042 17.4 0.2 3 23 1530 1550 1528 1550 0.98 5 13 5.7e-07 3.5e-05 23.9 4.1 2 23 1557 1578 1556 1578 0.97 6 13 5.4 3.3e+02 1.9 0.4 5 23 1591 1609 1589 1609 0.96 7 13 1.3 83 3.9 5.4 3 23 1616 1637 1614 1637 0.93 8 13 0.14 8.8 6.9 0.2 2 23 1648 1668 1647 1668 0.96 9 13 5.5e-05 0.0034 17.7 0.4 1 19 1674 1692 1674 1696 0.95 10 13 1.6e-05 0.00097 19.4 0.5 1 23 1704 1726 1704 1726 0.98 11 13 0.0001 0.0063 16.8 7.6 1 23 1732 1754 1732 1755 0.96 12 13 0.0002 0.012 15.9 5.9 1 23 1760 1782 1760 1782 0.98 13 13 0.028 1.7 9.1 8.2 1 23 1788 1810 1788 1811 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTACAGTGCCCCGTGTGCACCCTGTATCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACACATCCCAAGGAGCAGGTGATCAAGGCCCTGGTACAAATGACCATCGTTGGCAGCAATGGAATGGACAGTGCCCTGGCGGCAGCTGTGCTCTCTGGCAGCGCTGCAACATCAGATGCCGCTGCCACaacatcatcaccatcatcatctaCGCCTGCTACTGTTGATGTGAAGCCAGttgtgccagcagcagcaccaccaccacctccaacttcaacgacaacaacatccAAATCAGCAGCACCCAAATCTGATTTGCtgcacagcggcagcagcaccagcagctgcaacaacaaattgagcaATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCACGACTGAGGCGCCAGCCACCACATCCAATACACCCACCACAAGCAGCGTGGCCGCCGTTTACTCCGACTATCGCTATGAACAGcagccccagcagcagcatcacggCTTTGCACGTGGTGCCGCCACGCTGGTCATACCACAGGCAccacagcaacaccagcaccaGTTCCTGGCCAGCCAACAGCAGTCTGCCCACTTTGCCCAccatccgcagcagcagcctacCATGAAGTACACTTATGCAACAGCGCtgcctccgccgccgccgccactgcAGATGTTTGCGCAGCAGGCGACGGCAACGCAGTCGCATCAGAAGCCACCACCCGCCTATGGCGCCGCCATCAGTCAAATTAGATCTCAgcacaaccaaaacaaacatcagcagcaacaacaacaacagcagcagcagcaacaacaacagcagcaacaacaacaacacataaaCGTACAACAAAACATTAACTTAGCACCACCGAGTgacaaacacaacaaagtaAATACGGAGATCTTTCTAAATCCACCGCCTCCACCACCGCCACAGCTCACAATTCCGTCAACGTCAGCTGCATCAAGACTGCAACatccacagcaacaacaacaacaacaacaatcgcttgcagcgggcagcagcaacagcagctatgTGGTAGCCACATACGCCAGCTCCTGGTCGTCTCTGATGTCATCAAGCTCAGCCGGACgcgccagcagcagtcgcCAAACGACCAACTCGCCCTTTGGTGCCCTGCTAAATGCTGCGGCGCAAGCTGCCTGCGCCTCTCCCGCCTCCTCTGGCGCTGCGTCTGTGCTGCGGTATGCCGAGTCGCCAGTGGCGCACTATCTGGAGCGCGAAAATGGCGACTTTATAGTCCAGGAGACGCCCAAGCACATTGTCGAATGCGTGGAAAAGGACGACGGGGAGTTCTCTGTGATTGAACGCATCTATCAGTCGCCACCCAGCGTGCTGCATATACACGACGACGATGAGGACGACGAAGAGGAGGGGGATGAGGAGGAGCCAGATAAATGctGGGCAAGCGAGGATGAGAATCACGGAAAGCTGGCACACGATCATGTCGAGGATGGCGACGATGAGCACGAGGATAGTCGCAGCAGAGTTGGACCGAAGACCACATCGAAAAAGTCACGCAAGTCGAAACCAAATGGCAAAAAGCACAAACGGGTTGCCAAACATCAGCCGGAGGATGAGGACGACTTTATGAGCATAGGCAGCAGCTGTGCCGAGAGCGATCATCAGCTGGAGGAGCAACAGCCGACGCAGGCGCATGCGGCACCGGCTGCGTCTGCGTCGCCATCTCAACTATGCACTGCGCCTTCGACAAGcagtggagcagctgctgctgcagcagctgcggctgctggcgGATCAAGCGGTGCCAGCTCGACAACTAGCGGCTCCATCAAGTCCAAGAAAAATCGTGTGACGGTGCTCAGCGATGTGCCGCTGAATATGAACGAGTATCTGGATCTGGTGGGCAACATTGTGGCTTCCAGTCGTATTGGTGCGGCTCGTCCGTTTGCCGCCGTGGCGCCTATACCGTTAGTCAAGGTGGAAAAGGAGGAGCCGCTGGACGACTACGACTCTATGCGGAATGCAGAGATGCAGTCAATGGAGCAAAAACCCAGCGTGGAACAtgccagtggcagcagcaatagcagcagcagtggacACGCCACCACCAGCGTCATTCGCAtggccagcaccagcagcagcgcgaaCTTGGCCACCGACGATCTCACACAGCCGCCGCCCATGAAGGTGGAGGTGGAGGCAACGGTGCTGATGCCGCAGCGCTTCTCAACGCCGGCGCAGCAACGGGGCCCCAAGAAATTAGTCATCAAaccaaaggcaacagcaacggcgacggcaacggcaacgacgaATAAgactgacaacaacagcatcagcagcaactgcgCGGAAAGCTCCACCAGCATATCAAAGGTGGCCACGGAGCCGGTGCAGATCAAGAGCGAGAATGTGGAGACGACCACAAcgagtggcagcagcagcagcattctGGAGAAGCATCTGACCACCAGCTATGCGGCACAGCAGGCGCGCAAGCACTCGGCGGTCAATGATGACGATGCCCGCGTGCTACTGGAGTTTGCTAATTCGAAGCAAATGCCTCTGGCTGGCAACAGCAATCAGACCACGTTTGTGGTGAATGCGGCCAGTTTTGCGTCGGCGGGCTCCGTgttcgccagcagcagcggcggcgctcAGAAGTCGACCAAGCCGGGCGAAGAGTATATTCTGCCTGATGATAACAATCTGGAGGTGGATGAAATTGTGATATCGTCCTCGTCTTCCTATGCCTCAaactcgcagcagcagcaacagcactcgcagtcgcagcagcagcagccgcagccagcgCAGCAGGTCTtgcagcaggcgcagcagccTTCCGCCTTTACGGACTTTAATTTCCTGTACCATCCCAACGcgccaacagctgcagcagcaacaacggcggcTGCAGCAACCACTGCCAACTTTGCTCCATTTGgcatacagcagcagcagcagcagcagctgcaacatccCCACCACGGCTCCAGCGAAGCCACCAATGCCGCCACGCTGGCGTCCTCCTCCAGCAATTCATCCGCATTGGACCAGGAATGCTCGATGAATGCCACGTTTCGCATGGCTAAGCAACAAACAACGCTGAGCTCCTGGTATCAggcacatcagcagcagcagccgcaggcaACCACCTCCCACGGCTCCGGTGTGGAGCAGTCAAGTAATTTTATCGCCGCACTCGCAGCCGTCGATTGCAGCAGCGTGGCGGGTGTTGACAGCGATGCCAAGTACTTGGATCTGGATGCCTGCAAGCGTGAACAGCttagcaatagcagcagccaTTTGTCCTCGGGCTGTGCGTCCACGTCCACAACATCCTCATCGTTTGCAGCTGCGCCCACGGAGAGCAGTCTGGTTGGTGGCCTGGGTCTTAACATACGCACCGACGAGAAGATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGCGACATCGAAAACTCCTGGAGTCAGTCGATGTACGGCGACATATCACAGCGTTACTTTAGAGGCCAGTTCACGGATGGCTATAATCAGCAGCTGGCCGATTGGCGGCACGACTATTATCCGGCACAGGATCTTAGTGGCCAGCAGCAGTCACAGCGTGAGCAAAAGCGTTTTGATTTCAATGCGGTCGCCTCGGAATACGCGCAGCCAGGCGATCTGGACGCCACCTCGAGCTCAACTAGAAACAATCATTTGCTGGATGCACAGCCCACCACTTCCACGTCGTCGTCGGCTTTGCTGGCTGGTCCACCGATAGCCTCGACATCCCGTGCGGCCGCCGAGGCGGAAGCTGTGGCCGCGGCGTTGGCACAACGGAAGCCGCCGCGGCGCAAGATCTACAAGTGTCCGCACTGTGTGGCCATCTTTGAGAAGCTTAAGGAGCGCAACGCGCATTTGATCAGCGAGCATAACTATGTGCGCCAGAATCGACGTCTCATCTGCACCCTGGCGTCTCATCTCCCACAGACGCAGGCTCAACaggagccgcagcagcagcaacaacagcagcagcagcatttgatGTTGCAGCCGGGGCACACAAATGATGATATCTTGCATGAGGACTCCAAGGATGGCATTGTGAAAATCAAGCAGGAGCACTGTCAGGATAAACAGGATTCAACGGAGCATCTACTTGGCCACATGGAGTTGCCCGACGTCAAGGACTCGGGCCTGCTCGATGCCAGCGGCGAAAACGGTCACGATGCAGACATGAAGCCACCAACTAGCGTCACCGAGCTGGACGAGAAGCCCGCCATAGCGCCGTTGGCCATGACCACGCCCGCTGCCAAACTGGCCGCCCTCTATCGCATGCTAATTGCCTACAACGAGTCGAAACTGGGCCAGGAGCGTAACAATCTCAGCGAGCTGGAGCAGAAAGCCATGGAGAAATCCATATTCCTTTGCTATGTCTGCCGCACCGATTTCCCCTCCGTAAAGCTGTACGATGCACATCTCACTGAACATCCCGCCGAGTGTTTCACCTGCGGCAAGAAGTTCTATCGCTGGAAGAACTTCTCGCTGCATCTGAAACGACATCTGGGCTGGAAGGAGTTCGGCTGCTACGTCTGCGACAAGAAGTTTGTGGTGCGCAGCGCACTCGTGGAGCACATGCGCATGCACACTGGCCAGACTCCACTCAAATGCAAGATATGCGGAAAGAAGTTCAAGCGCTATTCAAACTTGACGCAGCATCGCAAGCGTCACACCAAGATGATGGTGCGTAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTTCTGCCCTCGAAGGCGCGCTTCCTGTGGCACAAAGAGACGCACGACTTGAAGCCGAAGTGCTGTCCGTATTGCTGCGATCGTTTTGTGCATGCGAACTCGCTGCGCCGGCATATTCGACTGGCCCATTCGGACAAGTTTGACTATGCCGAGCCCATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACATCGATCAAGGCGCACATGGCCACCCACTCGACGGATCCGCAATACGACTGCGCCATTTGCAATAAGAGCTTCTCCACCAAGTGGAATCTCAAAATACATTCGTGGGTGCATGCGAATCGCACAGCCAAACCGTTCAAGTGCGAGTATTGCCCGAAGGCGTTTGTGCGCGAGTTGGACTTCAAGAATCACATGAATGCGCACAAACAGATCAAGCCCTACACATGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTATATGCGGCACCGGCGAGAGCATCATGGCAACAAGAAGTTTACCTGCGACCAGTGCGACAAGTCCTTCCATCGCCACTACTATCTGATCGAGCACAGGCGCATCCATACCGGCGAACGGCCATTCCACTGCACCATCTGTGGCAAGAGCTCGACCACGAAGACCAATCACAACAAGCATCTGAAAATACATCATTCGCGCGATCCCTTCACTGTGGAGGTTTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSNGMDSALAAAVLSGSAATSDAAATTSSPSSSTPATVDVKPVVPAAAPPPPPTSTTTTSKSAAPKSDLLHSGSSTSSCNNKLSNPPIKAVKSAPPTTEAPATTSNTPTTSSVAAVYSDYRYEQQPQQQHHGFARGAATLVIPQAPQQHQHQFLASQQQSAHFAHHPQQQPTMKYTYATALPPPPPPLQMFAQQATATQSHQKPPPAYGAAISQIRSQHNQNKHQQQQQQQQQQQQQQQQQQQHINVQQNINLAPPSDKHNKVNTEIFLNPPPPPPPQLTIPSTSAASRLQHPQQQQQQQQSLAAGSSNSSYVVATYASSWSSLMSSSSAGRASSSRQTTNSPFGALLNAAAQAACASPASSGAASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEDDEEEGDEEEPDKCWASEDENHGKLAHDHVEDGDDEHEDSRSRVGPKTTSKKSRKSKPNGKKHKRVAKHQPEDEDDFMSIGSSCAESDHQLEEQQPTQAHAAPAASASPSQLCTAPSTSSGAAAAAAAAAAGGSSGASSTTSGSIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDSMRNAEMQSMEQKPSVEHASGSSNSSSSGHATTSVIRMASTSSSANLATDDLTQPPPMKVEVEATVLMPQRFSTPAQQRGPKKLVIKPKATATATATATTNKTDNNSISSNCAESSTSISKVATEPVQIKSENVETTTTSGSSSSILEKHLTTSYAAQQARKHSAVNDDDARVLLEFANSKQMPLAGNSNQTTFVVNAASFASAGSVFASSSGGAQKSTKPGEEYILPDDNNLEVDEIVISSSSSYASNSQQQQQHSQSQQQQPQPAQQVLQQAQQPSAFTDFNFLYHPNAPTAAAATTAAAATTANFAPFGIQQQQQQQLQHPHHGSSEATNAATLASSSSNSSALDQECSMNATFRMAKQQTTLSSWYQAHQQQQPQATTSHGSGVEQSSNFIAALAAVDCSSVAGVDSDAKYLDLDACKREQLSNSSSHLSSGCASTSTTSSSFAAAPTESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRGQFTDGYNQQLADWRHDYYPAQDLSGQQQSQREQKRFDFNAVASEYAQPGDLDATSSSTRNNHLLDAQPTTSTSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCVAIFEKLKERNAHLISEHNYVRQNRRLICTLASHLPQTQAQQEPQQQQQQQQQHLMLQPGHTNDDILHEDSKDGIVKIKQEHCQDKQDSTEHLLGHMELPDVKDSGLLDASGENGHDADMKPPTSVTELDEKPAIAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516419;
- 90% Identity
- -
- 80% Identity
- -