Basic Information

Gene Symbol
hang
Assembly
GCA_035044025.1
Location
JAWNMN010000400.1:3166132-3181925[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.37 24 5.6 1.0 3 23 514 535 513 535 0.93
2 18 0.62 41 4.9 3.6 3 22 642 661 640 661 0.89
3 18 0.0008 0.053 14.0 3.3 1 22 775 796 775 798 0.90
4 18 0.092 6 7.5 0.1 2 21 810 829 809 830 0.93
5 18 0.00093 0.061 13.8 0.2 2 23 927 949 926 949 0.95
6 18 0.0035 0.23 12.0 0.2 1 23 957 980 957 980 0.96
7 18 0.00041 0.027 14.9 0.5 2 23 1067 1088 1066 1088 0.97
8 18 0.00038 0.025 15.0 2.9 2 23 1223 1245 1222 1245 0.97
9 18 0.03 2 9.0 0.2 2 23 1254 1276 1253 1276 0.95
10 18 0.0018 0.12 12.9 0.3 1 23 1289 1312 1289 1312 0.97
11 18 0.00017 0.011 16.1 1.1 1 23 1371 1393 1371 1393 0.99
12 18 0.0026 0.17 12.4 0.9 1 23 1401 1424 1401 1424 0.96
13 18 0.09 5.9 7.5 0.4 2 19 1432 1449 1432 1450 0.94
14 18 3.5e-05 0.0023 18.2 0.4 3 23 1545 1565 1544 1565 0.98
15 18 0.00055 0.036 14.5 0.1 1 23 1600 1622 1600 1622 0.97
16 18 0.00079 0.052 14.0 0.6 2 23 1712 1734 1711 1734 0.93
17 18 0.0085 0.56 10.7 0.3 3 23 1790 1810 1790 1810 0.98
18 18 9e-05 0.0059 17.0 2.1 1 23 2278 2300 2278 2300 0.99

Sequence Information

Coding Sequence
ATGTGCGAcgctgccacaacaacaacaacaacagcagcagcaataacaacaactgcagcagcagcacaaggaACAGGTGCAGCTGGCGATAATGCGATGGAAGAACAAAATCAGCGAGAGCGACAGAGCTGCTGTCGCCTGTGCATTGCGCCCGCCAGCGAATGCATTTCGATCATCAACAGTTATGCGGCCGATAAGGAGCCGTTGGCcactaaaatacaaaactgcGTAAATATCAAGATCACATCGGTGGATCGTCTATCGTTGCACATTTGCCATGCCTGCATCAGTTATTTGAACTCGTGGCAGAGCTTCAAGAATCGCTGTTTCAGCTCACAGTCGAAGCAGCGCCAGTGGCTGGAGACAGACAAAACCAAGCAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAACACCATtgaaccacaacaacaacaacaacaacagcagcagcagcagcacgaaaTAAAAATGGATTCAGCGACGACGGCAGCTGAAAAGGTGTCCGCTGCCAACATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGtccaaagcaacagcagcaagcacagcaacaacagtcgcagcaacatacgcagcaacagcatgcAACAGGGGCAAGATCAACAACGAAAACgtcgacggcggcggcggcggtggcggagTCGCAACCAACATTGCAAACCCTTTTATTGCAGGTGCCCACAGCAGCGGCATTGGCAACGGCGtcaacacagcaacagcagcgcaagcatcagcagcagcaacaccatcagcagcagcaacgtggCAAGCAGCCGCAACATCAGTactatcaacagcagcagcagcagcatcgacaGAGTCGCGTTCGTCAACCGCGGCGACAGCAACAAGCGGCAACGGCCAAATTCAGGAGCAAATTGTTTATGCCACTGGATATATCGGTGCCAGCGCTGCCAGCGCTGTTGCCACCGCCGACGccagctgttgctgatgtaACGTCGTTGCTATTGCCATTGTCGCTGCCACTTGATTTTAGCCAAAATCCGAATCTGAATCCAAATCCCAATCAgtatccaaatccaaatccaaatcaaaacTTAAATCAGAGATATACAAGTAGCCTTTTAGTGCCGCCCCCGCTGCCGCTGTCCGCGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGCCACTGGCTGtggtgcaactgcaactgcaaccgcaGTCACGACTCCATTGCTCATGCCGTCGGTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGTACGACACGGATGATGACTTTCAAATGAGGTCCATAGACGAATCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAAtACCTCTGACTATGATTATACGGCTCAGCATGGCGTGACCGCGGCTGTGGCGGCGGCATCGCTACCCGCCAGCGCTGTGGCAAATGTGGCAGCCGCTGGGGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACACGGGCCAACGCTCGTCGCCACGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCGATCACAAAACCAACGCCGGCCCTCGCCGCCGCATTGGAGATACAGCgcgcagcggcggcggcaaccgCAACCGCTGAGGCAACCCGTGCCGCTGCCGGTGGCAATATATCGGCCCAAAAATATCGACAGGTGGTGATGAACACGTTCACCAAATGCGAGAACGGCGGCTTCGACTACGACAATCCCGAACAGTATCAGCAGCTGTTGTCGCATGACAAGGTCGACTTCATCCAGAAGAACACCGAATTTCTCGAACAGTACCAGACGATGACGTGCCGCTGTTGCAACAAGTTCTTCAACACGTACAAGAACTTTATGGCGCACGTGCGCAAAAAGTATCCGTCGCTGCCGCGCAACTTATGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTCCATGCCAATGCCGCCTCATCCACTGCCACCACATCAACGACAGCTGCGGCGACTGCTctaaaccagcagcagcaacagatggTGACAGCAAacgaaacagcagcagaaacaacaacagcaacgccaacaacacCATCAACGGATCGTACGGAGAAGTTGCGTGCCAAGGATCTGCTGGTTAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTCCGCACAAAGCACGAGTTCCGCACCCATGTCTACGATAAGCATGCGGATGTGCAACGCAAAGATAACAATTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCGGTGGATCGTCGAAGGCATTACAATAACATGGATTGCATTGTGCGGCTGCGCTGCATGACCTGCGATGCCAAACTGGAGACGCATCAGCGCTTCCTCGAACATGTCTATCAGGATCATTTGGGTGGCGTGAGCAGTGATAATGCGTCCCAGCGCAGTTTGCTCGGCTCCCTTGGCATTGGCGTCGTCAGTCAGTCACCCAACGACGAGtcgcgcagcagcaacagcaacaataaccacaacaataacaacaataataatactaataacaacaacaacaacaatccatCTTCGCAGTATTTCTCACGCATGCCACAGGTCTGTCCGATCTGTGGCCAGCAGTACAATAACTATAACAATGTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCCGAGACATACAAGTGTGTCCGTTGTGGACTGGGCTATCCGCGCATCTCCTATCTGCGGGAGCACATGACCAATGTGCATGGCGTGGACAAGAATCGGCAGACAGGCGGATTTGAGTATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTAATGTCTATTACAAATGGTGGGACACTcgatgatgatgacgaagaTGGCGACAGCGTCGGCCCCATTGCCAAAAAGATGCGACTTAATGATAGCAGCGGCCTCAACATGAGCAGCGTTGCCAACCTGCAGAAGAAGTGCCTCCTCTGCAATGCGGTGTTCAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACACCGATGATAACGCCAAGTGCTGCTCTGGCGGCTGCCAATCGCATGACGCCCAAATCGCTGACAATAACAGCAACGCCACCGCTCGAGGTGACAGCCACGGCGACGTCGGCGTCGGCAACATCGTCGTTAGCGACGGGCACAACAAATACATCaactgcggctgcggctgctgatgcaacaaagacaacaactgTGGCTGGAGTTAAAGCAGTGGCAGCATTTGCTTCCTCCTCATCGGGAGCAGCCgcctcaacagcaacaggcacaggaacagcatcaacatcagcatcatcatctgGCAACTTGCCGCCAGCAATGGCGCATCAGACGGCCCAGGAGCAAGCGGTATTCCGTCGCAGCCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGTATCTGCCAGCGGAGATTCAGTTCGAAGAAGTCGTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGACTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGATGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACTGTTTACAGCTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACAAGCCACCACCgattcatcatcatcatcggcagcagcagccggtgGCAAACAATCATCAAACAAGtcagcgactgcaactgctacCTCTACAGCGGCGGAACTGGCGGCAGACACATCATCCCCGTCGGGCGCGGCAGGGGCGGCCACTCAGCTGCCACTCTACTGGTACCAGTGCAAATATTGTCCATCTAACTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGgTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGCAggatcagcaacagcagcagcaacaacaacaacaggtgcagcagcaatatcatCAGCGAGCCATCTTCAAGCACAAAACGggagatgatgatgacgaggatgaggacgatgaTCAGTTGCAGCTAATGGACGATGGCGGTGGCGGCAGCAATGATAGCAATGCTGGCAATGCCATTGcaaaagctgcagcagcagcgccgagCGGCCCAATAAAGATACGCATTCCGGAGGTGGCATGCACCATTTGCGGTGCCCGGTTCACCGATCAGGAGATGTTTACCAAGCACATACAGAAGCACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCCATGTTCGATGATGGGCCAGCGGATGCCGGACAATTTCAGATTGAGCACCAGAACGAGAATGGTGAATACGCGTGCGATTTGTGCAACAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCACTCAACGACGGCGAAGCGACAACgctgaacaacagcagcaacaacagcagcagcagcaacaacaacaacaattcgctGAGCTCATCATCGATGCTGCATCTACGCGAACTGCATGCAGTGGGTCTGATGcccaatcagcagcaacaccagaaacagcaacaacagcaacagcagcaggaacaacaacagcagcagcagcaacaacgaacgAGCAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACAttcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTGAGCAATCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGACGTGTCGCCGCTGCGGCGATCTGAAGTTTGAGACCAAAGAGCAATGGATCGAGCATAAGCTGGCCGATGCGAGGGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAATATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTGATTGTGCCGGTTGCCACCaagccaacagcaacgacacccaacaatgttgcaacgggagcagcagcaaccgttTTAGCTGCCACATCAGCAGAAGGTGCAGTAGCAGAAGGAGCATCAGAGGCGGCGAAGGTAAaaacgccaacagcagcaaaggaACTTAAGTCTAAACAGCAGTCGGACAATGTGAAGCGAACGATACAGCTGGATGGTGGGAAGCTAgcgaagcaacagcagcaagaggaggaggaagaggatgATAGTGATATGGATGATGATAGCGATAGTGGcaatgatgatgaggagggcAGCACTAGTgctgacgacgatgatgaggacgacgatgatgatgaggagggcgacgtcgacgacgatgatgaagatgatgaggAGGGCGACGTCGAAGATGGTgagaaaaatgttattaaactGAAAATGCTGCAACTATTGCCGGAAAATAGAAACACCAAcaacgacgtcgacgacgatgatgaagatgatgaagatgatgaggACGGCGACGTCGAAGATGgtgaaaaaaatgttattaaactGAAAATGCTGCAACAACTACCGGAAAatacaaacaccaacaacgacgtcgacgacgatgatgaagacgatgaagatgatgagGAGGACGACGTCGACGATGATGACAAACATGTTATTAAACTGAAagtgctgcaacaacagccggaaaatacaaacaccaacaacgacaacaacaacagcgctaTTCTTAATGACAACGATATCATTGAGTTGGAAATCTTGTCGGAATCCAATgccgacgacgatgatgaggaagatgacgatgatgacgatgacgacgacgatgatgatgatgataatgataatgataatgatgacgatgatgatgatggcgaagacgatgacgatggcgatatcgatgacgatgacgatgataatACAACGGTTGAGCAACATCAGCCGAGGGCCCTCAATTTCGACTATTCGTGCACCGACAGCGCCAAGCTAAATGGCAACGGTGGCGAAAAGTCTGTGGTGAAATCAAagacacagccacagccaatgATGGtcatgcacagcagcagcaggagaagtCGCCGCGGGGATGATGGCGAGGAGGAAGTGGATGATAtggatgatgaggatgatgatgatgttgtggGTGAAGCGATGTCCATTGATGATATTATTGTGGAGGATGATGGTGTGGATGATGACGAAGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgaagatgatgaagaggatgacgatgatggcgatgatgaGGATGTTGGTGCATCATCATCTGAGAGCgagtcgacaacaacaacatcgtgTTCAACTGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCATCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTTCAGACACACATTAAAAGTCATTTCCTCAATGGGCCATCGGcggggagcagcagcaacagtaacaagaGCAATGGCGCCAGCAGGAgcaccaataacaacagcaacaacaacaacaacattagtagtagtagtagcagcagcagcagcagcaacaacagcaataacaaaatcaatacCAAAAAGTCCGGCTTGGATGCAACGacgaagacaacaacagcaacaacagttaaaGATGCAGCAACGGACGCTGCAACGGGCTTCAACTGA
Protein Sequence
MCDAATTTTTTAAAITTTAAAAQGTGAAGDNAMEEQNQRERQSCCRLCIAPASECISIINSYAADKEPLATKIQNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCFSSQSKQRQWLETDKTKQQTLLGYLDLNRAENGNTIEPQQQQQQQQQQQHEIKMDSATTAAEKVSAANILDGIPQLKKRKSLTVYVSPKQQQQAQQQQSQQHTQQQHATGARSTTKTSTAAAAVAESQPTLQTLLLQVPTAAALATASTQQQQRKHQQQQHHQQQQRGKQPQHQYYQQQQQQHRQSRVRQPRRQQQAATAKFRSKLFMPLDISVPALPALLPPPTPAVADVTSLLLPLSLPLDFSQNPNLNPNPNQYPNPNPNQNLNQRYTSSLLVPPPLPLSAPVATMSSNEAAIATGCGATATATAVTTPLLMPSVPAVPIKDEPLYDTDDDFQMRSIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAATATAEATRAAAGGNISAQKYRQVVMNTFTKCENGGFDYDNPEQYQQLLSHDKVDFIQKNTEFLEQYQTMTCRCCNKFFNTYKNFMAHVRKKYPSLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHANAASSTATTSTTAAATALNQQQQQMVTANETAAETTTATPTTPSTDRTEKLRAKDLLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVSSDNASQRSLLGSLGIGVVSQSPNDESRSSNSNNNHNNNNNNNTNNNNNNNPSSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMTNVHGVDKNRQTGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEDGDSVGPIAKKMRLNDSSGLNMSSVANLQKKCLLCNAVFSNNIGLSNHMRSHYTPMITPSAALAAANRMTPKSLTITATPPLEVTATATSASATSSLATGTTNTSTAAAAADATKTTTVAGVKAVAAFASSSSGAAASTATGTGTASTSASSSGNLPPAMAHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSQATTDSSSSSAAAAGGKQSSNKSATATATSTAAELAADTSSPSGAAGAATQLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQVQQQYHQRAIFKHKTGDDDDEDEDDDQLQLMDDGGGGSNDSNAGNAIAKAAAAAPSGPIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQIEHQNENGEYACDLCNKTFPQVIALKVHRKWHFRGDSKQIPLNDGEATTLNNSSNNSSSSNNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQQQEQQQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDLKFETKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATKPTATTPNNVATGAAATVLAATSAEGAVAEGASEAAKVKTPTAAKELKSKQQSDNVKRTIQLDGGKLAKQQQQEEEEEDDSDMDDDSDSGNDDEEGSTSADDDDEDDDDDEEGDVDDDDEDDEEGDVEDGEKNVIKLKMLQLLPENRNTNNDVDDDDEDDEDDEDGDVEDGEKNVIKLKMLQQLPENTNTNNDVDDDDEDDEDDEEDDVDDDDKHVIKLKVLQQQPENTNTNNDNNNSAILNDNDIIELEILSESNADDDDEEDDDDDDDDDDDDDDNDNDNDDDDDDGEDDDDGDIDDDDDDNTTVEQHQPRALNFDYSCTDSAKLNGNGGEKSVVKSKTQPQPMMVMHSSSRRSRRGDDGEEEVDDMDDEDDDDVVGEAMSIDDIIVEDDGVDDDEVVGVGGGVVEDDDEDDEEDDDDGDDEDVGASSSESESTTTTSCSTAAHGAAADQSNSIYTCDLCQLCFDSQELLQTHIKSHFLNGPSAGSSSNSNKSNGASRSTNNNSNNNNNISSSSSSSSSSNNSNNKINTKKSGLDATTKTTTATTVKDAATDAATGFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00496779;
90% Identity
iTF_00496779;
80% Identity
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