Dpar005641.1
Basic Information
- Insect
- Drosophila paracracens
- Gene Symbol
- bab2
- Assembly
- GCA_035044025.1
- Location
- JAWNMN010000394.1:1701830-1703714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-18 1.1e-14 53.8 0.0 1 43 59 102 59 104 0.95 2 2 0.0073 11 5.7 0.1 29 42 384 398 384 400 0.92
Sequence Information
- Coding Sequence
- ATGATTGAGACGAGCGGACACGGCTGGATGGGCGCACCGGCAACAGGCGCATCTGTGGCGGCAGACAGCTACCAGTATCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGCAGAATCTGGTGCAACAGTTGCGATTTCGCGAACGCGGTCCCCTCAAATCCTGGCGACCCGAGGCCATGGCCGAGGCCATATTCAGTGTACTGAAAGAGGGACTCTCCCTCTCGCAGGCCGCACGCAAATATGATATACCCTATCCGACATTTGTGCTCTACGCCAATCGCGTGCACAACATGCTGGGTCCCTCTCTCGACGGCGGCACCGATCCCAGGCCCAAGGCACGCGGCCGACCCCAGCGCATTCTGCTGGGCATGTGGCCCGAGGAGCTCATACGCAGCGTCATCAAGGCGGTCGTCTTCCGCGACTATCGCGAGATCAAGGAGGACATCAATGCGCATCAGTATGCCAATGGACAGGCGCACGGCGCGCACTTTGGCTCTGGCAACTCGTCGGCAGCTGCCAATGGCTATCATAGTGCCGCAGTCAAAATGGCGGCACAGAACGCTGCACTTGCCCCGCCCGACGGCAGCAATGCACTGAGCAGCATGACGGAGACCCTCCGCCGCCAGATACtctcccagcagcagcaacagcagcagcagcagcaacagcaatcgccGCATGTGCAATCAATGAATATGTACAAGTCGCCTGCGTACTTGCAACGCTCAGAGATTGAGGATCAGGTGTCTgccgcagcggcagcagcagccaagcatCAGCAGAGGGAGCGACGTGGCAGCGAGAATCTACCCGATTTGAGTGCACTGGGTCTGATGGGATTGCCGGGCCTGAATGTGATGCCATCACAGCAGGCGCCACATCAGCGTggaggtggtggcggtggcggtggtggcggggCGGGTAACGGGGGCAGTGCAGGCGCTGCCATGCATCCCAGTGCCGCCAGCTACGCCCGAGAGTTGTCGCGGGAGCGTGAGCGAGAGCGCGAGATGTCCCGGGACCGGGAGCTGAAGGAGGCGATGCATGCTCGCCAGTATGGCAATCAGTCGCGTGGCTCCAACTCCTCCGGCGGCAGCAAATCGGCAGCTGGATCCTCCAGTCGTCCGGGTGCCGCATCCCCTTACTCCACGCTCTATGCGAAGCATGCCAAGGAGCATCCCAATTATGCGTACAACAAACGCTTCCTGGAGTCGCTGCCGGCGGGCATTGACTTCGAGGCGATTGCCAACGGACTGCTGCACAAGTCGGTGAACAAGAGTCCGCGCTTCGAGGACTTCTTTCCCGGCCAGGACATGAGTGAGTTGTTTGCCAGCGCCAGTGATGCAGTTGTCGGAGCTGGTGCTGGCTCcgcctcagcagcagcggcggcagcagcagcagccgctgcctATGCGCCGGCAGCGTTGCGCGAATCGCCGCTGATGAAGATCAagttggagcagcagcatcaggcgACAGAGTTGCCGCACGAGGATTGA
- Protein Sequence
- MIETSGHGWMGAPATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDINAHQYANGQAHGAHFGSGNSSAAANGYHSAAVKMAAQNAALAPPDGSNALSSMTETLRRQILSQQQQQQQQQQQQSPHVQSMNMYKSPAYLQRSEIEDQVSAAAAAAAKHQQRERRGSENLPDLSALGLMGLPGLNVMPSQQAPHQRGGGGGGGGGGAGNGGSAGAAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSGGSKSAAGSSSRPGAASPYSTLYAKHAKEHPNYAYNKRFLESLPAGIDFEAIANGLLHKSVNKSPRFEDFFPGQDMSELFASASDAVVGAGAGSASAAAAAAAAAAAYAPAALRESPLMKIKLEQQHQATELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00593015;
- 90% Identity
- iTF_00573970;
- 80% Identity
- -