Basic Information

Gene Symbol
hang
Assembly
GCA_018153455.1
Location
JAECYA010000044.1:387133-396676[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.26 20 5.8 1.0 3 23 399 420 398 420 0.93
2 18 0.33 25 5.5 3.2 3 22 528 547 526 547 0.89
3 18 0.00056 0.042 14.2 3.3 1 22 650 671 650 673 0.90
4 18 0.043 3.2 8.2 0.1 2 21 685 704 684 705 0.93
5 18 0.00065 0.049 14.0 0.2 2 23 832 854 831 854 0.95
6 18 0.0019 0.14 12.5 0.1 1 23 862 885 862 885 0.96
7 18 0.00027 0.02 15.2 2.9 2 23 1079 1101 1078 1101 0.97
8 18 0.021 1.6 9.2 0.2 2 23 1110 1132 1109 1132 0.95
9 18 0.00075 0.056 13.8 0.2 1 23 1145 1168 1145 1168 0.97
10 18 0.00012 0.0088 16.3 1.1 1 23 1222 1244 1222 1244 0.99
11 18 0.0018 0.14 12.6 0.9 1 23 1252 1275 1252 1275 0.96
12 18 0.71 53 4.4 0.3 2 19 1283 1300 1283 1301 0.93
13 18 2.5e-05 0.0019 18.4 0.4 3 23 1409 1429 1408 1429 0.98
14 18 0.0047 0.35 11.3 0.1 1 23 1466 1488 1466 1488 0.97
15 18 5.8e-05 0.0043 17.3 0.6 2 23 1582 1604 1581 1604 0.93
16 18 1.3 96 3.6 0.1 2 20 1624 1642 1623 1644 0.91
17 18 0.0062 0.46 10.9 0.4 3 23 1659 1679 1659 1679 0.98
18 18 9.6e-05 0.0071 16.6 2.1 1 23 1976 1998 1976 1998 0.98

Sequence Information

Coding Sequence
ATGGCTCCTCCTCATCCCCTGGCCATTGGCCGCCCATCCTGCTGCTCCATCTGCTCCTGTTGTATCTGGTGGAAGAGAGGTGTGGGCAAGATCACGCCCCAGGATCGATTGTCCTTGCAGATATGCCACGCCTGCATCAGCTACCTCAACTCGTGGCAGAGCTTCAAGAACCGATCCCTCATCTCCCAGACCAAGCAGCGCCAGTGGCTGGAGGCGAACAACAGCAGTAGCATCCACAAGAGCAAGCTGCTCAACTACCTGGACCTGAACAGTGCCGAGAATGGCTCTGCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCCTGGAGAATGAGGATGAAACGGACAATGCCGGGATACAGGGAGCGGCAGCCACAGCGGCTGCCATTCTGGACGGCATACCCTCGCTGAAGAAACGAAAATCTCTAACAGTCTATGGAAGGCACAATCCCACGGCGAACTCCTCCTCGTCCTCCGCCACCGCCGGCGGTGGCTCATCCACGCTGCGGAAATTCAAGCCGAAACTGTACTTGCCCCTGGATATAGCGGTGCCACCACTGCCGCCGCTGCCCGTGACTGCTCCCGCTGCCGTTGCTCCTCCGTCTGCCCTTGCCCTTCCACCCCCTCCTGCTCCGCCGCCGCCTCCGGCCGCCGGCGCCCCCAATCCTCCGCCCGCTGGCGTGGCTGGTGGCAGGGAGAGCTTGTCGGTGGCACTGCCACTGGATTTCAGCCAAGCTAGCTGCACCAGCAGCAGCAGCAGCAACAATCGCCTGTCCGGCCTCCTCCTCCAGCAGCAGCAACAGTCGGCTGCCGCAACTGGCGCTGCGCCACCTTCCGCTACCGCATCCGCATCCGCGTCCACGTCCACGTCCGCATCTGCTCCATTGCTCATGCCGCCACTGCCAGCGGTGCCCATCAAAGATGAGCCCATCGACACGGACGACGACTACCAGATGAAGTCGATTGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGACATGCCGTTGATGACCTCCGACTACGACTACACGGCCCAACACGGCGTCACAGCCGCCTCGGCAGCCGCCTCCCTGCCGGCCAATGCCGTCGCCAATGTGGCCGCTGCCGGCGACTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACGCGCGCCAATGCCCGTCGCCACGAACGCAACCTGCACCCCAATCTGTTTCAGCTCTCCACCGACTCGCCCCACAACACGCCCATCACCAAGCCCACGCCCGCCCTGGCCGCCGCCCTGGAGATCCAGCGGGCAGCCGCCGAGGCAGCCACCGCCGAGGCGAACCGAGCTGCCGGAGCGGCGGGCGGGAACATCTCCACCCAGAAGTACCGGCAGGTGGTGATGAACGCGTTCATCAAGTGCGAGGGCGGCGGCTACGACTACGAGAATCCGGAGCAGTACCGGGCGCACCTCACCCGCGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATGACGTGCCGGTGCTGCAACAAGTACTTCAGCACCTACAAGAACTTCATGGCCCACGTCCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCCCTGTTCATCTCCCACCTGAAGAAGAGGAACTGCATCAACCTGTACCGCGTGCTGCACGGCATCCGGGAGAAGGCCAACGCATCAGTCTCCAAGGACGCCACGCTGATAGAGGGGGGCGATGGGCGAGTTGGCCACCTGGATGCCGGCTGCAGTCCCAATGTGACCGGCGACGTAATCACCAGTGCGGCCGGATCGGAGCGACCGGAGAAGCTGCGGGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTGTGCCCCAAGGGCTTCCGGACCAAGCACGAGTTCCGGACGCACGTCTACGACAAGCACGCGGACGTCCAGCGCAAGGACAGCAACTCGATCCAGTGCAACTTCTGCGGCCTGGACTTTGCCGACCCGGTGGACCGGCGGCGCCACTACAACAACATGGACTGCATCGTGCGCCTGCGCTGCATGACCTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGAGCACGTCTACCAGGACCACCTGGGCGGCGTGGGCGGCGGCAGTGGCACCGGCGGCGGGGGCGCCAGCAGCGACAATGCCTCCACCACGGGCAACAGCATGGAGCACTCGCCGGGCAAGCGCAGCCTGCTCAGTGCCCTGGGCATCGGAGTGGGCTCCTCGGCGGACGAGTCGCGCAGCAGCAGTGTGGCCCTCGGGCCGATGACCTCCACGCCCAAGCCGGGCAATCAGCAGAATCCTTCTGGCGCTGCTACCGGCGGCGGCAATGGCTCTGCCCCGAAGTCGCAGTACTTCTCCCGCATGCCCCAGGTCTGCCCCATTTGCGGCCAGCAGTACAACAACTACAACAACGTGCTCCGACACATGGAATCGAAGCATCCGAACAAGCTGCCGGAGACGTACAAGTGCGTGCGGTGCGGCCTGGGCTATCCGAGGATCTCGTACCTGCGGGAGCACATGATCAACGTGCACGGCGTGGACAAGAACCGGCACTCGGGCGGCTTCGAGTACATCGTGAACGCGGACGCCGTGAAGCTGGCGGACGGGAGCACCCCCAACGTGTACACCGGTCGCTACGACTACGTGATGAAGGACCTCATGTCGATAACAAATGGTGGGACCCTCGATGACGACGACGAGGAGCCGGGCAGCGTGGCCAAGAAGATGCGCCTGGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAACCACATGCGCTCCCACTACACGGCCTCCAACTCGGTGAACGCCGCCCTGACGGCGGCCAACCGGATGACGCCCAAGTCCCTGACCATAACGGCCACCCCGGCCGACACCAGCATGGACCTGCTAACTGGAGGCTCTTCCACGCCCGCGGCATCATCAGCGGCGGGTGTGCCGCCCGCCATGGCCAACCAGACGCCGCAGGAGCAGGCCGTGTTCCGGCGCAGCCTCGACCAGGCGGCCGACCGGCGGTTCCGGCGGATGCGCTGCCGCATCTGCCAGCGGCGGTTCAGCTCGAAGAAGTCCTACCGCTACCACATGCTTACCGACCACCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAACGCGGAGTTCGCCTACGAGAAGGGCCTCAAGGTGCATCTGTTCAAGGTGCACGGGCGGGCCATCAAGGACGAGATGATCGTGAAGCAGTTCGAGTGCGAGGTCTGCTCGATTGTGTACAGCTCCGAGATGGAGCTGCAGCAGCACAAGCGCAGTGTCCACAAGATGTCCTCCGCATCGGCGGCAGCGGCCGCCTCCTCCTCCTCCTCGAAAATGGACGACGACAGCAGCATTGTCGTGGATGACAGCACCCTGAAGCCGGCGGGCGGCGACCTGACAGACGCCTCCGTCAACGTCAGCCTGAGCACGCCGCTGTACTGGTACCAGTGCAAGTACTGCCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCCAACGACTACTCCTGCAAGGACTGCGGCAATGTCTACAGTGGAAGGAAGAGTCTATGGGTCCATCGCTATAAGAAGCATCCACAGGTCCCAGACCCGGCCGAGTGCTCGCTCTGCCGCAAGATTTTCTTCGACCGCCAGATGCTGGACAACCACACGCCGACGTGCAACCGCAAGCCCATCACCTCGACCGGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGCCCTCCAGAAGCAGGTGGGCCTGCACTCTGGCATCTTCCGGCACAAGACCGGCGACGATGACGACGACGATGACGAGGATGAGCAGCACCAGAAGCTGGCCGATGGAGCTGGCGACAGTGGAGCAGTTGCTTCGACGCCAGCTCCGGCCCCGGCCACCACAACAGCAACCTCGGTTAAGATACGCATTCCAGAGGTGGCGTGCACCATTTGCGGGGCCCGCTTCACCGACCAGGAGATGTTCACCAAGCACATCCAGAAGCACGAACAGGAACTGTACGTGGACAATCCCCTGGCGGCGATGTTCGACGATGGGCCGCCCGACGCCGGCCAGTTTCAGGTGGAGCTCGAGAAGCAGAACGAGAACGGGGAGTACGCGTGCGATCTGTGCGCTAAGACGTTCCCCCAGGTCATAGCACTCAAGGTGCACCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCGACGGCGAAGCGACACATTTGACCAACAACAACCACACCACCAGCAACAACAACAACAGTCACAGCAGCAACAACAACAGTTCGATGTCGCACCTCCGGGAACTGCATGCGGTGGGCCTGATCCCCAACAACCAGCAGGCCCAGTCGGCGGCGGGCCACCACCAGCAGCAGCATCATCCTCAACAGCAGCAACAGCAGCCGGGCAACGCCAGCCTGGGGAGCAAGTCGATGAAGCGGAAGCGTGAACTAAAGTGCGAATACTGCCCCTCGACGTTCATCAGCAACAACAACCTGCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTGAGCAACCTGCCGGAGCCGCCGGTCATCGTGGTGGACGACCATCTCTCCTGCCGCCGGTGCAACCTCAAGTTCGAGACAAAGGAGCTGTGGATCGACCACAAGCTGGCGGACGCCAAGGTGGTGCGGCCGTTCTGCCCCTTCCAGTGGGGCTGTGATCTGTGCGGCGAGTACCTGTCGCGCAAGGAGAAGCTGATGAATCACATCAACAACCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGAGGCGGCGGAGAGGGCGGCAGCGAAGCCGCAGGAGGCAGGGGCAGTAGCGGTATCGAATGCCACCGCTAAGCTGGAGGAGCCCGATCAGAAGGCGGACGACGTCGGCAAGTCGGAGGGTAAACCTCTGCCGGACAGCGATGATCTGGACGAGGAGGACAGCTCCGGCGAGGAGGAGACCTCTGGCACGGGCGATGACGAGGAAGACGACGATGATGAGGAGGACTCGGAGGAGGATGTGGAGGACGAGGAGGACGACGAGGGCGATGGCGGCGAGGGCGAGGACGAGGAAGGCGTCCCCCCGCAGCAGCAGCCGCCCAAGATGAACCTCACCCAGGACGATGATCTGGTCGAGGAGGTGCTCAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAGAGCCCCAGCCGGTGGTGATGAACGGCAAGTCGAAAATGCCGCCACTCATTGTGGCCACATCGGACGAGGAGGATGAGGAGGACGGCATGCTGCCCATCGAAGACATAATCGAGGAGGAGTTCGACGAGGACGCCGCCGATCCGGAGCCCGAGGACGACATTGTCGAGGAGGACGAGGTTGAGGAGGTGGAGGAGGAGGTGGATGAGGTGGAGGAGGAAGAGGTAATCGATGAACTCGACGATGACATGGACGAGGTGGGCAACGAAAGGCGCAACTCGTCGTCGGCCAGCGAGTCGAATACAACCGCCACCACCACGACCACGTCGCAGTCACATTCCACGGGTGAGCGGCACAAAAAGGTGCCGGAGGTGCCAGGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTCCAGAGCCACATCAAAAGCCATTTCCTCAATGGTCCAAAGCTGGCCAAGGCCAAGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCAATGCTGCCACAGTCATCCTCCATCTCACTTGA
Protein Sequence
MAPPHPLAIGRPSCCSICSCCIWWKRGVGKITPQDRLSLQICHACISYLNSWQSFKNRSLISQTKQRQWLEANNSSSIHKSKLLNYLDLNSAENGSASXXXXXXXXXXXXXXXXXXXXXVLENEDETDNAGIQGAAATAAAILDGIPSLKKRKSLTVYGRHNPTANSSSSSATAGGGSSTLRKFKPKLYLPLDIAVPPLPPLPVTAPAAVAPPSALALPPPPAPPPPPAAGAPNPPPAGVAGGRESLSVALPLDFSQASCTSSSSSNNRLSGLLLQQQQQSAAATGAAPPSATASASASTSTSASAPLLMPPLPAVPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLMTSDYDYTAQHGVTAASAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAEAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYENPEQYRAHLTRDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHGIREKANASVSKDATLIEGGDGRVGHLDAGCSPNVTGDVITSAAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCNFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVGGGSGTGGGGASSDNASTTGNSMEHSPGKRSLLSALGIGVGSSADESRSSSVALGPMTSTPKPGNQQNPSGAATGGGNGSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEPGSVAKKMRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNHMRSHYTASNSVNAALTAANRMTPKSLTITATPADTSMDLLTGGSSTPAASSAAGVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKMSSASAAAAASSSSSKMDDDSSIVVDDSTLKPAGGDLTDASVNVSLSTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAXXXXXXXXXXXXXXXXXXXXXXXXXXIALQKQVGLHSGIFRHKTGDDDDDDDEDEQHQKLADGAGDSGAVASTPAPAPATTTATSVKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPPDAGQFQVELEKQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHLTNNNHTTSNNNNSHSSNNNSSMSHLRELHAVGLIPNNQQAQSAAGHHQQQHHPQQQQQQPGNASLGSKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLSCRRCNLKFETKELWIDHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKEAAERAAAKPQEAGAVAVSNATAKLEEPDQKADDVGKSEGKPLPDSDDLDEEDSSGEEETSGTGDDEEDDDDEEDSEEDVEDEEDDEGDGGEGEDEEGVPPQQQPPKMNLTQDDDLVEEVLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPQPVVMNGKSKMPPLIVATSDEEDEEDGMLPIEDIIEEEFDEDAADPEPEDDIVEEDEVEEVEEEVDEVEEEEVIDELDDDMDEVGNERRNSSSASESNTTATTTTTSQSHSTGERHKKVPEVPGFTCDLCQLCFDSQELLQSHIKSHFLNGPKLAKAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNAATVILHLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00488153;
90% Identity
iTF_00488153;
80% Identity
-