Dpar002618.1
Basic Information
- Insect
- Drosophila parabipectinata
- Gene Symbol
- dmd-4
- Assembly
- GCA_018153455.1
- Location
- JAECYA010000178.1:18949763-18951758[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 4.5e-22 77.5 9.0 1 47 40 86 40 86 0.98 2 2 0.42 1.7e+03 -1.2 0.2 23 31 310 318 302 322 0.78
Sequence Information
- Coding Sequence
- ATGGCCAGCATCGGTAGTGAATCTATTGGTGATTCTGGGTCTTCTTCCAAACGTCCTCGGGTTGCAATCAATTCCAAGAATCTGAAAATAGTAGAGCCCCAGCCTAAGGGCAACAATCGAGTGCCCAAGTGCGCTAGGTGTCGTAATCACGGGATTATTTCGGAGTTACGAGGCCACAAGAAGCTCTGCACCTATAAGAACTGCAGGTGCTCCAAATGCATCTTGATCTTTGAAAGGCAACGTATAATGGCTGCTCAGGTTGCCCTCAAGCGCCAGCAGGCCGTGGAGGATGCGATTGCACTGCGGTTGGTGGCCACCAAAACGGGTCGCTCCATAGATGCCCTGCCGCCGGGCAACATTTTCGGGCTGACCGTGACCCAGCCAAGCTCGCCAACTCGTAAGAAGAATGACGACCAGGAGGGCAAACCTTTTGTGGAGGACTTGAAGCGACAGAAGGAGCTTCCCAGCGAAGCTCCGGCGGTTGCCCAGGATCTGAGTGCAAGTCGACGGGAGAGTGTCTCTCAAACAGCCATAGATATGCTGGCCCAGCTATTTCCCCAGAGGAAGAGATCTGTCCTGGAGCTGGTCCTCAAGCGTTGCGATCTCGACCTGATCCGTGCCATCGAGAATGTGTCGCCGGCGGGAAAATCCGCGCCCGCGGAGGTGTCTAGTATTCAGATTCCGAATCAGCAGGCAGGCTCCACTCTGCCGAGTCTGTCCAGCCTGCCTCTGGCCACGCCCCAAAGGAGCAGTGCCTTCAGACCAGTTGTGGCGGATCAGTACCAGAACAAATCTATGGTCGAGCTGAAACCTCCTCCGTTTGGCAGCACCACTTCGGCCGCAGCGGCCGCCATCTGCGCCTACCCCAAGTGGTTCGTGCCCCTCTCCTTTCCGGTCACCATGGGCCACCTCTCCAACCTGGCACCGCGATGCACTCTGCCCAACTGCGCCTGCCTGGACAGCTACCAGTTCCACTAG
- Protein Sequence
- MASIGSESIGDSGSSSKRPRVAINSKNLKIVEPQPKGNNRVPKCARCRNHGIISELRGHKKLCTYKNCRCSKCILIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGRSIDALPPGNIFGLTVTQPSSPTRKKNDDQEGKPFVEDLKRQKELPSEAPAVAQDLSASRRESVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPAGKSAPAEVSSIQIPNQQAGSTLPSLSSLPLATPQRSSAFRPVVADQYQNKSMVELKPPPFGSTTSAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00545981;
- 90% Identity
- iTF_00488036;
- 80% Identity
- -