Dpar013960.1
Basic Information
- Insect
- Drosophila parabipectinata
- Gene Symbol
- sip1
- Assembly
- GCA_018153455.1
- Location
- JAECYA010000366.1:5832687-5835332[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-92 3.3e-88 295.7 14.6 3 275 414 681 412 681 0.98 2 2 0.025 2e+02 1.2 0.1 156 199 692 732 685 736 0.71
Sequence Information
- Coding Sequence
- ATGTCGGATAACGAGTATGAACGCTTTGAAGTCACGGACTACGACCTGGACCATGAGTTTAATATTAACAGGCCGCGTGGTCGCAACACCAAGGAGCAGATGATCTACGGTATTTGGGCAGATGAGAGCGATGAGGAGAGCGGTGGAGAGGGCAGGAAGCGGAGGGGACGGTCCACCCGCCAACCCAAGGACTACACCATGCCTGTGAACTTTGTGGCCGGCGGCATACAGCAGGCGGGTAAGAAAAACAAAAAAGGGATTAAGGGAGAGGATCAGAAGGACGCAATTAAGGAGGGGGAGGATGCAGAGGAGCAAGAAAACAGTGATGATTCGGGGGGAAACTCTAGACCGGCTTTCGGACGTCGGGGCGATTCCGACAGTTCAGACAGCTCCGAGGACGAGGAGCGGCCTTCTCTTGGCAAAGCACCAGAGAAATCCACCTTTCAACATCGCGACCGAAACGTGGGCGCCTGGGAGCAGCACACGCGCGGCATTGGCGCCAAGCTGCTCTTGCAGATGGGCTATGAGCCCGGCAAGGGTCTGGGAAAGGACCTGCAGGGCATTTCCCAGCCCGTTCAGGCTCACGTGCGGAAAGGTAGGGGTGCCATCGGGGCCTATGGACCAGAAACAGCAGCCAGCATAGGAGGAAAAAGCGCCAGAGCCATCAAGGTGGATGAGGATGTGCGAGAGGCCAAGGAGTTCAAGGAACAACTCAACAAGTGGCGCAAGGGAGGCGCTGCCACCGATACACAGGAGCGCCAAGGCAAGCGTTACTATTACAAGTCCGTGGAAGAGGTGATTGCCAAAGGCAACAAGTCCAGCCACTTGCTTTCGGAAAAGCTCAGCAAGAAACTGGGCAACGTTCCGGTAATAGACATGACGGGGCCAGAGAAGCGAGTTCTCAGTGGCTACCATGCGCTGGGCCAGGCCAAAATCACTCCGGAGGAGACACTCTTCGACGCCGAGCCATCAGACAAGGGAGCCGGCCCTGCCCCAGCTTCTGTGTTCTCCATGCCCGAGCTGACGCACAACTTGCAGCTGTTGGTGAGCCAATCCGAGCAAGAAATCATTGCCATTGACAAGCAGGAACGGGACTGCTCCAATCAGCAAGTAGCTTTAGAGGCCGAGCACCGCAGGCTGGAGGAAATCGTGCAGCTGGAGCATAACCATATACGCACCCTCGAAGAGGTTCTGGACCGCGTGGAACGGCTAAGCGAGGACCCGGAAATCGGTTTGCCGCAAGCGGAGCGACTGTTTCGGGAACTGCTCGAGCAGTATGCAGCTGAATTCCAGGAGTTCGGCCTGGCAGATCTGGCAGCCGGAGTAATCGCCCCACTCTTGAAGATAGAACTATCCGAGTGGCGGCCACTGGAGCACCCCACAGAGCCCATACACATGGTGAAGAAGTGGCGAGCAATGCTGCAGACGGGCGACCCCGCGAAACAGGAGCAGCGAAATGTGTTCGATCCCTACTCGTCGCTGATCTGGGCAGGGGTCATGCCCTCGTTTCGGGCCTGCGCCGAGGCTTGGCAACCGAAGGAGCACTCGTCCATGGCAGCTCTTCTCGATGCCTGGGCTCCTTTGCTGCCCACTTGGGTTCTCGATTCTGTGCTGGAGACGCTCGTGCTGCCCAGATTGGTCGCCGGGGTTCAGAGCTGGGATCCCCTTACAGATACTGTTCCGATTGACAGCTGGGTATTGCCTTGGTCCTCCATTCTGGGCAATAAGCTGGAGGAGGCAGTATATCCGCAGATCCGTAGCAAGCTCGGCGAGGCTTTGCGCGCCTGGTCGCCGCAGGATCGTTCGGCGAGAGCCATGCTGACGCCGTGGCAACACGCTTTTCCCCCCGAGGAGATGCAGGACTTCCTTCAGCGTCACATCGTTCCCAAACTGCAGGTAGTCCTGAGCGAATTCGTCATCAGCCCACTACACCAGGATCTGGAGCTGTGGAATCAAGTGTGGGAGTGGCATGAGCTCATCGATCCCATGTACATGGCCCTGCTACTGGACAAGCATTTCTTCCCGCGCTGGATGCAGATGTTGGTGATGTGGCTGAATCAGTCGCCCGACTATGCGGATATATCTCGCTGGTACATCAACTGGAAGAACATGTTCAGTGAGGCTGTGCTCCGAGAGCCAAGTGTAAAGGAGCACCTGCGGCGAGCTCTAGACATGATGCACCGCGCAAGCGATGCCCTACTGCAGCCCACGACTGCTCCTCCGCCTCCAGTGCCACCAGGCCCCGTTCCGGTGGGAATGATACCGCCCGTGATGATGATGGATCTGATGCACCAACCCGCCCAACTGGAGTTCAAGGAGCTAGTATCGCAGCGCTGCGCCGAGCTAGGCATTATCTTTGCTCCACTGCCCGGGAGAAGAGAAATGGGAAAACAGATCTACCGGGTTGGCAAGCTCTTTTGCTACATCGACCGAAACGTTTGCATGCTGAGTGACGGAAGCTTCACCAACTGGCAGCCCGTGGGTCTCAATCATCTCTTAGAACGCTCCCAAACCGGAATCCTTTAG
- Protein Sequence
- MSDNEYERFEVTDYDLDHEFNINRPRGRNTKEQMIYGIWADESDEESGGEGRKRRGRSTRQPKDYTMPVNFVAGGIQQAGKKNKKGIKGEDQKDAIKEGEDAEEQENSDDSGGNSRPAFGRRGDSDSSDSSEDEERPSLGKAPEKSTFQHRDRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKSARAIKVDEDVREAKEFKEQLNKWRKGGAATDTQERQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLFDAEPSDKGAGPAPASVFSMPELTHNLQLLVSQSEQEIIAIDKQERDCSNQQVALEAEHRRLEEIVQLEHNHIRTLEEVLDRVERLSEDPEIGLPQAERLFRELLEQYAAEFQEFGLADLAAGVIAPLLKIELSEWRPLEHPTEPIHMVKKWRAMLQTGDPAKQEQRNVFDPYSSLIWAGVMPSFRACAEAWQPKEHSSMAALLDAWAPLLPTWVLDSVLETLVLPRLVAGVQSWDPLTDTVPIDSWVLPWSSILGNKLEEAVYPQIRSKLGEALRAWSPQDRSARAMLTPWQHAFPPEEMQDFLQRHIVPKLQVVLSEFVISPLHQDLELWNQVWEWHELIDPMYMALLLDKHFFPRWMQMLVMWLNQSPDYADISRWYINWKNMFSEAVLREPSVKEHLRRALDMMHRASDALLQPTTAPPPPVPPGPVPVGMIPPVMMMDLMHQPAQLEFKELVSQRCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDGSFTNWQPVGLNHLLERSQTGIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00488010;
- 80% Identity
- -