Dosh002235.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- FOXP4
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000287.1:3519195-3521982[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 2.6e+03 -1.4 0.0 7 33 154 180 152 186 0.87 2 2 4.1e-27 4.8e-24 84.2 0.2 2 82 328 402 327 408 0.94
Sequence Information
- Coding Sequence
- ATGCATCGGATACATGATGACGAGTACTCGGAAGACATAAAGGAGTCCGACTTTAAGGCATCCATTCACCAGAAAGAAGTATCCGTTAAGTCACGTCACCAACTTTCCATACCAGATATTTGCACGGAGGCCGTTAAGAATAACTGTTTTCCCACCTCGGGATTTTTGAACAATTCGATCGCCTTTGCATCCCATGTAGTCAAGTGCAGCTCCCCGGCCTCGAGCTTAGATGAATCGTCCTCGACGGCCCAGCACGAATCGAATCCCCACATGCACATCCAGGGCCAACATATGATGGCTCCTGTGCCGGATCTTGGCTTCTATAATGTTCCCGAGTTCATTTCAGAGCAGGAGAAGCTCATGTTTTCCGATGCCGAAAGGTTTTTACGGTCAAAGGATAACGAAGCGTGCAGTAATGATTATGGCTATATGCACGACGAGTTTGCCATGCGCAAGTATTACCATCCTCTGTTTGCCCACGGCATATGCCGCTGGCCCGGATGCGAAATGGATCTGGAAGATATCGCATCATTTGTCAAACATCTAAACACTGAGCACGGATTGGACGATCGATCAACTGCTCAGGCACGCGTACAAATGCAAGTAGTCTCTCAACTGGAAACCCACCTTCAAAAAGAAAGAGATCGCTTGCAGGCAATGATGCATCACTTGTATTTGTCCAAGCAACTTTTATCCCCCACCAAAATTGATAGAAAGGACATACCCGGGAGAGAGGGAAAATTTTGCAGAAGTCCGCTCACAATAAATAGCATAGGACGACCGATCCGCCAATCCAATTCTCCTGGTTCACTTAATCTACCAATGGTTAATTCCACAAACTTATGTTCCGTCAAAAAGAGAAGCCACGACAAAAACTCATTTTCAATAAATGGTGGATTACCCTATATGCTTGAAAGAGCTGGTCTTGATGTTCAACAGGAAATTCATCGGAACAGAGAATTTTACAAAAATGCTGATGTGCGACCGCCTTTCACGTATGCGTCCCTTATAAGACAGTCTATCATCGACTCCCCGGACAAGCAACTAACTCTGAACGAAATTTATAACTGGTTCCAAAATACGTTTTGCTACTTTCGGCGCAACGCAGCTACGTGGAAGAACGCGATACGTACAAACCTATCTTTGCACAAGTGCTTTGTACGCTATGAGGATGACTTTGGCTCGTTTTGGATGGTCGACGACAATGAGTTTGTCAAGAGGCGTCACCTGTCGAGAGGGCGGCCCCGGAAATACGATCCGTCCTCTTCCCCGAACTCTTGCCAATCTGGCAATGGTGTGTCCACTGACAAGAATACCTGCGACAGTTGTCCGCAGCATTGCTCGAGCATGCCCCCGGGGGCTGAGAGTGCCCTAGATTCGAACAATCCAAACGATATCGGGCGAATGGGTTGTCTTCCTTTTTGCGGAGGTGATGGTTTAAGTAAGACATCCAAGGATTATAGTAATATTGATTCGGGTCTTGTCGAAAGTAACAGCCACTTAGCAATGGATGAATACTCGACTGCAATGTACGAAAGTAGTGCCAATGAGCTTAACCGATAA
- Protein Sequence
- MHRIHDDEYSEDIKESDFKASIHQKEVSVKSRHQLSIPDICTEAVKNNCFPTSGFLNNSIAFASHVVKCSSPASSLDESSSTAQHESNPHMHIQGQHMMAPVPDLGFYNVPEFISEQEKLMFSDAERFLRSKDNEACSNDYGYMHDEFAMRKYYHPLFAHGICRWPGCEMDLEDIASFVKHLNTEHGLDDRSTAQARVQMQVVSQLETHLQKERDRLQAMMHHLYLSKQLLSPTKIDRKDIPGREGKFCRSPLTINSIGRPIRQSNSPGSLNLPMVNSTNLCSVKKRSHDKNSFSINGGLPYMLERAGLDVQQEIHRNREFYKNADVRPPFTYASLIRQSIIDSPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAIRTNLSLHKCFVRYEDDFGSFWMVDDNEFVKRRHLSRGRPRKYDPSSSPNSCQSGNGVSTDKNTCDSCPQHCSSMPPGAESALDSNNPNDIGRMGCLPFCGGDGLSKTSKDYSNIDSGLVESNSHLAMDEYSTAMYESSANELNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00596470;
- 90% Identity
- iTF_00547879; iTF_00581347; iTF_00536581; iTF_00578341; iTF_00529383; iTF_00594364; iTF_00491330; iTF_00569512; iTF_00477834; iTF_00617450; iTF_00525707; iTF_00524236; iTF_00540908; iTF_00488533; iTF_00612632; iTF_00484954; iTF_00606136; iTF_00489194;
- 80% Identity
- -