Dosh016578.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- kn
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000224.1:7208557-7220840[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-90 2e-86 290.5 0.6 40 182 72 214 50 214 0.96
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGAGTTGCCCAAACAGAAAGCGAGAGCGAAATGACAGCGGGATTTGTCCATTCAGCGGCGGCAAATCACCATTCCCACCCACACCCACACCCACATCACAGCCTCAATAATCACATCCAGCTCCAGCGGCAGGACAATCTCAATCAGGATCATAATCACAATCAGACATTAAGCATTAAGACAATGCGCTGTGAAACGAGTTTGGGCATCGGCCGTGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCGAACTTCTTCCACTTCGTGATCGCCTTATACGATCGGGCTGGCCAACCCATCGAGATCGAGCGCACGGCCTTCATCGGGTTCATCGAGAAGGACTCGGAGTCGGATGCCACCAAGACGAACAATGGCATCCAGTACCGACTGCAACTTCTCTATGCAAATGGAGCTCGCCAGGAGCAGGACATATTTGTGCGACTCATCGATTCGGTGACCAAGCAGGCCATCATATACGAGGGTCAGGACAAGAACCCCGAGATGTGCAGAGTGCTTCTAACTCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MFAPRRSARVAQTESESEMTAGFVHSAAANHHSHPHPHPHHSLNNHIQLQRQDNLNQDHNHNQTLSIKTMRCETSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00614700; iTF_00337300; iTF_00571694; iTF_00477807; iTF_00593638; iTF_00489870; iTF_00613298; iTF_00488502; iTF_00532896; iTF_00491301; iTF_00606106; iTF_00525679; iTF_00524208; iTF_00523479; iTF_00484923; iTF_00500827; iTF_00590757; iTF_00483472; iTF_00577566; iTF_00570922;
- 90% Identity
- iTF_00477807;
- 80% Identity
- -