Ccos014751.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- kn
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000074.1:13876-43729[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-90 1.2e-86 291.4 0.3 40 182 69 211 37 215 0.95
Sequence Information
- Coding Sequence
- ATGACAACGGGATTTTTGCATTCAGCGACGGCAAATCAACAACAGCAACAACAACAACAACAAACACATATCCCAAATCAGAATCACAATCAAAATCCAAATCAGATCACACAACAGCTGCATTTGCATGAAATATCAGATAATCTGAATCCAGACATTAATCATAATCAAAGTTTAAGAAGTACCAACAACAAAGCTATGCGCTGCGATACGAGTTTGGGCATTGGACGCGCCCACTTTGAGAAACAGCCGCCCAGTAATTTGCGTAAATCGAACTTTTTTCACTTTGTGATTGCATTGTACGATCGCGCCGGGCAGCCCATAGAGATTGAGCGCACTGCCTTCATTGGTTTCATTGAGAAGGACTCGGAATCGGATGCAACCAAGACCAATAATGGCATACAATATCGTCTGCAGCTGCTCTATGCGAATGGTGCGCGACAGGAGCAGGATATATTCGTGCGGCTGATCGATTCGGTAACCAAGCAGGCTATCATCTATGAGGGTCAGGATAAAAATCCCGAAATGTGCCGTGTACTGCTAACGCACGAAGTCATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACACCATCGGACCCCGTCATTATTGATCGAGGCAACACCAGCAGCAACGATCGCCTCTTGTCCAATGCCAGTTGA
- Protein Sequence
- MTTGFLHSATANQQQQQQQQQTHIPNQNHNQNPNQITQQLHLHEISDNLNPDINHNQSLRSTNNKAMRCDTSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRGNTSSNDRLLSNAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565168;
- 90% Identity
- -
- 80% Identity
- -