Doch000732.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- TRERF1
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000003.1:5909603-5924834[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-09 6.2e-06 26.1 0.1 2 45 1748 1791 1747 1792 0.93
Sequence Information
- Coding Sequence
- ATGGCTGCCATAAATACGGTATCCAAAAGCATACATCTGCCTCTGACGAATCTCAGCGCTCAGCGTGTGTTGATGTGCAGCGCCTCTCTGGGCAGCGAGGGATCCGTGACACTGCAACTGAGAGATGCGAGTACCTTGGAGACAGCAGCCGATagcacaacaccaacaacaacatcgacatcgacatcagcaacagcagcaacaacaacaacagcaacatcaaatcCAATAGCAACATCGTCATTGAGCAGCCAATCAAATGGCGTCACAGTGCTTGAGACATCGTCATCAGCTGCGTCAGGAATAACGTCAGCATTAGAGAATGCTCTGACCGTTGGCTATCCGGATCCGGAAATGCTAGCAGATGTTTTAGGCACCATACAGACAGCCTctCTTAAAAACAAgcatagcaacaacagtaataatagcaacaacaacaccagcatcAAAagaagcaataacaacaagagcagcagcactgcAGCGACAATTCTGACAAGCTCCGGGATACATCTGAGCAGTCCCAATAAAATAACGATAACACGGCGCAGTGCCAGCAACAAGATTAGCGTACAGACTGTGAGCACATCGACGAACACAACGATTAGCAGCATTGGCGGCAGCAAGACCAACTACATTAAGAACTGTCTaatacgcagcagcagctgcagcaacacgGCCACCAATGTTACAACGTTGGCACAGATtctgagcaacagcagcaccagcagcgcaGCCAGTTTACTTAgtcagcacaacaacaatagcaactgcagcaacagcagcaactttagCATCGCATCCTCTGTGGGCAGCATTGgcagcgtcagcagcaacaccagcaacaccagcagcagcagcaattgtagcagcagcaatagtaacgatagcaacagcagcctcGGCCAAAGCTTAAGCTTCAAGAGCAATGGTCGAAATGTTGCTGGCATAGTTACTGCATCAACAACATCCAcgagcacagcagcaactggcattggcattgtcaCCGTCGACAACGCGCCCAGAAAGAGTCGACCCAAATTATCCTCCCCTACGCGTCACGGACCTCAGCAGTGTCAGaTTTGTAGCAAGATCTTCGGAAATGCCTCGGCGTTGGCCAAGCACAAATTGACGCACAGCGACGAAcggaaatatatttgtgcgCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACGCATCGCAACAAGAAGCCTTACGAGTGTCGAGCGGATGGCTGTGGCAAATCATATTGCGATGCGCGCTCCCTTCGTCGTCATTCAGAGAATCACCATGGTTGCGTGCCGACCAGCGAATCACTCTCGCCCACAGCCAGCACCAACGGCAACGTCATCAACGGCACCAGCAGCGTAACTGGCAGCgggagcagcagtagcagtagcaacgGCATCGGCGTTGCCACCAGTTCTCTGAGCCTATCGCCGGCTACGGCCAGCGGGGATGCCAGCTCACCAGATGGCGCCACCTGCATTCGCACATATATTTCCACTGGTAGCTCCATTGTGGATGCGGCCACTGGAATTGCGCTGTCCGATGAGCAAATCAGGGCAATGAATTTGCCCATCAAAACGGGTGTTACTCTGCTCTCGCCCACCACATCGACATGCTCGACAACATCTTCCACCGCATCTTCTATGTCATGCTCGTCATcgggcaatggcaacggcagctCCGTTGTGGCCAGTTCACCCACCATAACGCTCTGTGATGGCGCAACGCTGGAGGCCGAGGGACTCACACGTGAGCAACTCGATCTCATCAGCAAGATCATGCAGCAGACGAAGCAAACCAGTGCCCAGGTCACAGTCTCGTCGCCCACCAGCGTTAGTTCCTATAAAATCAATACGGAAACAGCCCAGGTCTCAGCGCGACCAAGGACCTGGAACATGCAATTGCTCAataatgtgcaaaatgtgACGCTTACAGTGGACGAGGGCACCGAACTGGTTGCTTCTGCATCAAGCCCACCCGACGAGGTAAAGGACGATGAGCTGGGCCAGCAACAGCTAGTGACCGCCATAAATCCCCACCTGCTCAACATTGTGAAGGTCGACAAGCCAGTTGAGTGTAATCTCTGTCACCGTAAGTTCAAAAATGTACCCGCACTCAATGGACATATGCGTCTGCATGGCGGCTACTTCAAAAAGGATCCGGAGACGAAGCGCAGCGAGAAGAAGGACTCCGGCGGACCTCCCCTGCAGACGGCCAGCATTGGAGTGCGTGCCCTCATCGAGGAGAAGATTATTAGCAAGCGAAAGGACATCCACAAGGGTGCCTTTGCAGTTCCTGCACCACCCAGCAGTGCGGTGAATAGTGGTGGCATcagctgcaacaataacaataacagcagcaacaacaacaacaataacaacaacaggaattGCAATCTGCGTCGCTCCATCAGCGACTTGGAGAGTTTTCTCAGTCCGAAGAGCAACGCGAACTGTAGCCTGAGCCAAGCGCTTGCCACCTCTTGCagcaccaccacaaccacagcGGTGCTGCCCGCTGCAACCACCATTAAGAGCAGCAGTGGTCTAAGCATTCAACAGATTGGCCTACCGCAAAGCATCGAGATCTTCAGCGGTGGGCAGAGACAGCCGAAAACTTTGAGTTTGGGCAGCGGTGCAAATACGATTACGATAACCACCAACAATGTGCctacgacgacgacaatgaGCGCTCTGTCGGCACTAAAGGGCGCCAGCAGCATAAGCAGTGTCTCTGGCAATGCGGATCCCAAGGATTCCACATTGATTGAGCTACTCAAGCGTGGCACGAGGATTGCCGTCACCTCGAAGAAGGCACAAAACACAAGTACAAATCTGCTGCTCAGCAATGCGGCCAACGCCGAACTCATTGGCAACAGTGTCCAGGCAGCGACTAGTCGTCAGATTatcaccaacaacaatcgcaCAGTGATTATACCCTCGGATGTGCATGTCGTGTCCACAAAGTCCAACAAGGTGAGCAGCAACGGAGCAAGCAATGCGAACAGTATCTCTCTGCCGGATGGCACACCACTCTCACTGACCATTGGCGGTAATCAGGAGAGCATTGGGCCAAGCAGCATCTCGGGTGGTGTCAATGGGGTCTATGCGGTCACCTACACGACCAATACGGATGCTGTCGATTTATTTGGCAATGCCGAGGTGTTTAATGTCTCGGATACGGAAATGCTATTGCAAACTGTGGACACAATGGAACTGCTGAACAATGAGGAAGAGAATGAGGATGAGGGGCACAAGCAAAGCGAACATTCCGAGAACTTTCCGCTGCTCAACAGTGTTGAGGACGATGTGCTGATCAAGTTGGAGCCAGAGTCGGGCACACCCaataccaacaccaacacaaacaccaacCCTAATCAGACAACAACGCCGTTGCCCACGTTCCAGCAATTCCATTCCAAGGAGCTCATCATGCAGAACAGCTCGCAGATTCAGGCGATTGCCAATATGCGGGGAGGTGTTCTCTCATCACCATTGCATTCGCCATTGGCTTATCCGACACCGCCGTCCAGTCACGAGAATGTTGCTCAATCCTCGCCATTTATCGAAGATGCTGCGGCTCAGTTTGTGGACGCCAACCACACGTTCTTCGGGGATAAGACAGATTTCTCGCACGTCTATTTCAAGACGGATGACGattgcatgcagcagcagctcagtgAGAATGACAATGAGAAGATACTCAAATTAAAGACGGTGCTGGAGGAGAGCGCTTTTGATGCTTCCATCAAGGTGGAGGATCTCCTAAATGGCACCGAGGATGATGCTGAGTGTGATCTGCGTGAGTTTGCGGAAACTAATTTGTCGTTTCTCGATGAGGATCAGGAATTCCTGAATGACTCACGCAATGCCACCTCACCTCTCTCAGAGTCCTTCTTCACCAGTGGCATTGGCTCCGCGGAGGATGTTAAGCAGGTGCTTCGCGAGGTCCTTCCAGATGAGAatatgcaattgcagctgagCAGCGAACAGCTGGCTGAGAATATCATCGATCTCTACTATTTGCCCGGATTGGGACTGCAATCTCAAATGATGTCCAACTCGGATGATCCGCTCTTGTCCTCTTCTCCCCGAGATTTTGGCCTGCAGCGTCAGGTGGTCCATGCGTCGACGTCGGCGACCTCATCGACGGTACCGTCCATGGAGCAGTTGCAGTCTTCCGGGGTCATGtttgagcaacaacagcaacaattgccgcctcaacagcagcaagacgAGCAGCAAGAACTGCaaccccagcagcagcagcaacagttagGGATCgggcaacagccgcagcagcagcaacagtccgACTTTATGCTGTCAAACTTTACGCCCGTGTCCTGTCAAACGCAGTATTTGGACGCCAATCAGCAGTCGATGACAATGCAGCCACTCAACAATCTGCTGCAACCATTACTCTtcggcagcaacaataatagcaacaacaacaacagcatcgatAAGCAACAAGAGTTTGGAACGCTGCTGCAAACAACAAGCGGACAAACATCCGCTCTGGATGCTAGCCTGATCTTTGCCTGCGGCGACGGAATCAAAAGTAattccaacaacaataaatcgCTGATTGCCAACTTACCCGCAGCAGCTCCAGTGGCGACACCATCACCCAGCTTTTCTAATTTGCAACCGTTGTCCAATCAAACGAATTCCATATTGAAGCGTCGCCTGCGCTCAAATGGTGCACAGGATGTGCACAAGTTCTCCAAATTCCATACGCTATCGCCACATCGCTCCAAGCTGCGCAAACCCTCACGCACCCACTTTACTCCGGCGCCAATCTTGAATCCGGATCGGAAGGGCACCGGACTCTACTACAGTGTACGCAAGCAGCTTGGTCAAAACATGTTTGATGCCTTTGACGATGATTTCGGTGATCCCGTGGGCCTGGTGGACTTCTCCGATGAGTCCAAGGTGAATCTAGGCTCGACGTATCAGGCGCAGATACCCGCCTGCAAGCCACTCGAAGAGGCCATCAAGGAGACAATGTGCGCGGACATGATGTGGGATCCTAGTGTACAGATCGACGAGAAAATACTGATGCGCTACATAGATCTCAGCAAATCCTCGGCCGTGCCCATGGGCAGCCATTCAGAGGAGGTAGCCCTCCAAGCCCTGCTTGAGGCGAAAGGTAATTCGGCGGCAGCTGTGTTAACCCTTCTGCAGACGCAGTCCAGCGCATTCCAAATGAAATGGACAGCCTACGAACTGGAGCAGTTTTTACGCGGCCTGGAAAGGCATGGCAAAGACTTTGGCAAAATCGCCAGCGAgcTGCTCACCAAGACATCGGGCGAATGCGTgcaaatgtattatttttggaaGAAGCTCTGTGTTGATTACAAGGTATCTCACCTGAAAATGGAGCCAGTTCCGCCCAGCACCCCAGTTGTGGAGCAGAAGCCATACGTTTGCGAGATTGCCGACTGCTCGGCGAGCTTCAGCTCGAAGGCGGCGCTGCACGGTCATGTTCGCATACACGCTTATGGTAGaaatgccagcaacagcaacaacaacaacagcaacaacaacaatcagcatGCCACGGCAATTagtgccaacaacagcaacaaccaccatagttccagcaacagcaacaacaacaccaataacagCAACGCATGCGCGCCCCAGCctagcagcaatagcaatcaATGCATcagtgcaacaataacagcaacaacaaccgtaGCGCACACAAAtggcaataacagcagcaacaccaataccaatgccaacaacaataacagcaacaacaacaacatcaacagcaacatcgcCAATGGAACTGGCACTTCCATAAACCCAACGTtgctatcagcagcagcaacaacatcgacagcaacaaaagacagcaacagcaacaattccAATATTGCAAAGGACACCGAGTTCCCCTGCAAGGTGTGCGGCAAaGTCTTCAATAAGGTGAAAAGTCGCAGCGCCCATATGAAAACGCATCGTGTGCAAGAATCAGAACAATCAACCAATTCCAAACAGCAATCGGCCACCAATGCAAATCTGTCTGCtgttgcagtggcagtggcactggcagcagcatcagcatcggcagcatcggcagcatcagcagcagcatcagcagcgtcTGTGGCATctacagcagcatcagcttcagcaGCAACCTCTGCAGTATCGGTTACGGCCTCCACCTCATCGTAG
- Protein Sequence
- MAAINTVSKSIHLPLTNLSAQRVLMCSASLGSEGSVTLQLRDASTLETAADSTTPTTTSTSTSATAATTTTATSNPIATSSLSSQSNGVTVLETSSSAASGITSALENALTVGYPDPEMLADVLGTIQTASLKNKHSNNSNNSNNNTSIKRSNNNKSSSTAATILTSSGIHLSSPNKITITRRSASNKISVQTVSTSTNTTISSIGGSKTNYIKNCLIRSSSCSNTATNVTTLAQILSNSSTSSAASLLSQHNNNSNCSNSSNFSIASSVGSIGSVSSNTSNTSSSSNCSSSNSNDSNSSLGQSLSFKSNGRNVAGIVTASTTSTSTAATGIGIVTVDNAPRKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECRADGCGKSYCDARSLRRHSENHHGCVPTSESLSPTASTNGNVINGTSSVTGSGSSSSSSNGIGVATSSLSLSPATASGDASSPDGATCIRTYISTGSSIVDAATGIALSDEQIRAMNLPIKTGVTLLSPTTSTCSTTSSTASSMSCSSSGNGNGSSVVASSPTITLCDGATLEAEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTETAQVSARPRTWNMQLLNNVQNVTLTVDEGTELVASASSPPDEVKDDELGQQQLVTAINPHLLNIVKVDKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKRSEKKDSGGPPLQTASIGVRALIEEKIISKRKDIHKGAFAVPAPPSSAVNSGGISCNNNNNSSNNNNNNNNRNCNLRRSISDLESFLSPKSNANCSLSQALATSCSTTTTTAVLPAATTIKSSSGLSIQQIGLPQSIEIFSGGQRQPKTLSLGSGANTITITTNNVPTTTTMSALSALKGASSISSVSGNADPKDSTLIELLKRGTRIAVTSKKAQNTSTNLLLSNAANAELIGNSVQAATSRQIITNNNRTVIIPSDVHVVSTKSNKVSSNGASNANSISLPDGTPLSLTIGGNQESIGPSSISGGVNGVYAVTYTTNTDAVDLFGNAEVFNVSDTEMLLQTVDTMELLNNEEENEDEGHKQSEHSENFPLLNSVEDDVLIKLEPESGTPNTNTNTNTNPNQTTTPLPTFQQFHSKELIMQNSSQIQAIANMRGGVLSSPLHSPLAYPTPPSSHENVAQSSPFIEDAAAQFVDANHTFFGDKTDFSHVYFKTDDDCMQQQLSENDNEKILKLKTVLEESAFDASIKVEDLLNGTEDDAECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLSSEQLAENIIDLYYLPGLGLQSQMMSNSDDPLLSSSPRDFGLQRQVVHASTSATSSTVPSMEQLQSSGVMFEQQQQQLPPQQQQDEQQELQPQQQQQQLGIGQQPQQQQQSDFMLSNFTPVSCQTQYLDANQQSMTMQPLNNLLQPLLFGSNNNSNNNNSIDKQQEFGTLLQTTSGQTSALDASLIFACGDGIKSNSNNNKSLIANLPAAAPVATPSPSFSNLQPLSNQTNSILKRRLRSNGAQDVHKFSKFHTLSPHRSKLRKPSRTHFTPAPILNPDRKGTGLYYSVRKQLGQNMFDAFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPACKPLEEAIKETMCADMMWDPSVQIDEKILMRYIDLSKSSAVPMGSHSEEVALQALLEAKGNSAAAVLTLLQTQSSAFQMKWTAYELEQFLRGLERHGKDFGKIASELLTKTSGECVQMYYFWKKLCVDYKVSHLKMEPVPPSTPVVEQKPYVCEIADCSASFSSKAALHGHVRIHAYGRNASNSNNNNSNNNNQHATAISANNSNNHHSSSNSNNNTNNSNACAPQPSSNSNQCISATITATTTVAHTNGNNSSNTNTNANNNNSNNNNINSNIANGTGTSINPTLLSAAATTSTATKDSNSNNSNIAKDTEFPCKVCGKVFNKVKSRSAHMKTHRVQESEQSTNSKQQSATNANLSAVAVAVALAAASASAASAASAAASAASVASTAASASAATSAVSVTASTSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00485798;
- 90% Identity
- iTF_00593355;
- 80% Identity
- iTF_00564889;