Basic Information

Insect: Drosophila ochracea
Gene Symbol: bab1
Assembly: GCA_035044125.1
Location: JAWNML010000054.1:2074459-2076779[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-17 1.9e-14 53.0 0.0 1 43 55 98 55 100 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-17	1.9e-14	53.0	0.0	1	43	55	98	55	100	0.95

Sequence Information

Coding Sequence: ATGATGGAGAACTCGCACGCTTGGATGGGTGCCACGGGCTCCTCGCTAGCAGCAGACAGCTATCAGTATCAACTGCAGTCGATGTGGCAAAAATGCTGGAACACCAATCAGAATCTAATGCATCACATGCGATTTCGCGAACGAGGCCCACTTAAATCCTGGCGTCCCGAAACAATGGCCGAGGCCATCTTCAGTGTGCTGAAGGAGGGGCTGTCGCTTTCGCAGGCCGCCCGCAAATACGATATTCCATATCCGACATTTGTGCTCTATGCGAATCGGGTGCACAACATGCTAGGACCCTCCATCGATGGCGGACCCGATTTACGGCCCAAAGGCCGTGGCAGGCCGCAGCGCATTTTGCTGGGAATTTGGCCAGATGAGCATATTAAGGGTGTCATCAAGACGGTCGTTTTTCGCGATAACAAGGACATGAAGGACGATAGCTTGGGTGCCCATCTGCCGCCGTACGGCCGGCATTCGCCCGTGTTTTCCTTGCAGGACATGCCGCTGAGCTATCCAGGCGCCGGTGGTGGTATGCCCGGCAGCGGCGCCGCCAGCCTGAGCGCACTGGCCTGCCCCAATGGCATGGGTGGCGCGGCAGCTGGCGGGGCAACGGGCGGTGGCGTCGGCGGCGCTGGCGGCATTGGCGGACCTGTTGTTGGAGCCGAGCAGCAAATGTCGCAGGAGCAAATGTCGGCAGTGGCCGCCGTCGCGCACAATATACGCCAGCAGATGCaaatggcagcggcagcgcagCATCAGCACGGGGAGGCGGGGCCGTCGCCGCAtccgccaccgccgcccgGCTTATTCCAATTACCGCCACACTTGGCGGGTGGTCCGGGCGGTGGCAGGGCGAGCATATCGCCGGCGCTGAGCAGCGGGTCCAATCCATCGCTAGTGGGCCCGCCAAGGCATGCGGCGTCACCGTGCGGTCCCGCCGGCCTCATGCCGAATCTGCCTCCCAGCATGGCCGTTGCACTGCATCGTGATCAGAGcaccgcagcagccgcagccgccgctgccgcactgctcagccagcagcagcagcatcacttgcaacagctgcagcagcagcatgcaatgcaccaacagcaacagcagcaacagcagcagcagcaacaacagcagcagcagcaacaggtgcATCCTCATCATCTGCAACAGCACAAATCCGGTTTCGGTGCCAGTTCcatgccacaacagcaacaacagcaacagcagcaacaacagcaacagcagcagcagcagcagcaactccatcaacagcagcaacagcatcttGGCCTGCTCCATGCGGACAAGTCCAAAGCGAAGAATAGTCCACATCGCAGCGAGACGCCCAGTTTGCATTCCCCGCTGACGGATTTGGGTCTGGAGCTGGGCTACAAACGGGATTATTCGCCCAGCCGTCTGTTTGCCGATGATCTGGCTGAGCTGGTGGGCGTTGGAAGCAACGTGGGCATCTCCTCCTCCACATCGGCATCctcaacagccacaacaacagcagctgcagtacCAGCGATGCCAGCAACTacagctggaggaggaggtgtAGGTGGAGTCGTCTCTACTGAGATCTgctccagcagcagtggcagtggcatcaAAGTGGAGCCCATCACAACCAGCAGCGAGTAG
Protein Sequence: MMENSHAWMGATGSSLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDNKDMKDDSLGAHLPPYGRHSPVFSLQDMPLSYPGAGGGMPGSGAASLSALACPNGMGGAAAGGATGGGVGGAGGIGGPVVGAEQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPSPHPPPPPGLFQLPPHLAGGPGGGRASISPALSSGSNPSLVGPPRHAASPCGPAGLMPNLPPSMAVALHRDQSTAAAAAAAAALLSQQQQHHLQQLQQQHAMHQQQQQQQQQQQQQQQQQQVHPHHLQQHKSGFGASSMPQQQQQQQQQQQQQQQQQQQLHQQQQQHLGLLHADKSKAKNSPHRSETPSLHSPLTDLGLELGYKRDYSPSRLFADDLAELVGVGSNVGISSSTSASSTATTTAAAVPAMPATTAGGGGVGGVVSTEICSSSSGSGIKVEPITTSSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496521;
90% Identity: iTF_00616123; iTF_00527972; iTF_00560182; iTF_00597284; iTF_00582885; iTF_00513383; iTF_00500232; iTF_00496521; iTF_00573973; iTF_00495034; iTF_00606988; iTF_00619764; iTF_00516917; iTF_00548730; iTF_00525051; iTF_00558586; iTF_00482156; iTF_00593018; iTF_00609804; iTF_00521275; iTF_00566715; iTF_00497308; iTF_00542364; iTF_00557131; iTF_00576269; iTF_00570322; iTF_00485785; iTF_00498075; iTF_00576987; iTF_00499510; iTF_00518366; iTF_00595872; iTF_00511199; iTF_00543668; iTF_00535235; iTF_00552229; iTF_00498794; iTF_00522095; iTF_00501728;
80% Identity: -