Dcon001953.1
Basic Information
- Insect
- Drosophila conformis
- Gene Symbol
- bab1
- Assembly
- GCA_035041375.1
- Location
- JAWNLE010000322.1:1097681-1100081[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-17 2.1e-14 53.0 0.0 1 43 55 98 55 100 0.95
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGTGCCACTGGCTCCTCGCTAGCAGCAGACAGCTATCAGTATCAGCTGCAGTCGATGTGGCAAAAATGCTGGAACACCAATCAGAATCTAATGCATCATATGCGATTTCGCGAACGAGGCCCACTAAAATCCTGGCGCCCCGAAACAATGGCGGAAGCCATCTTCAGTGTGCTGAAGGAGGggctgtcgctgtcgcaggCAGCCCGCAAATACGATATTCCATATCCGACATTTGTGCTCTACGCAAATCGGGTGCACAACATGCTGGGACCCTCCATCGATGGCGGACCCGATTTGCGGCCCAAGGGCCGTGGCAGGCCGCAGCGCATTTTGCTGGGAATTTGGCCAGATGAGCATATTAAGGGTGTCATCAAGACGGTCGTTTTTCGCGATAACAAGGACATGAAGGACGATAGCTTAGGTGCCCATCTGCCGCCGTACGGCCGGCATTCGCCCGTGTTTTCCTTGCAGGACATGCCGCTGAGCTACCCAGGCGCTGGTGGTGGCATGCCCGGCAGCGGCGCCGCCAGCCTCAGCGCACTTGCCTGCCCCAATGGCATGGGCAGCGCGGCAGGAGGCGGGGCAACGAGCGGAGGCGTCGGCGGAGGCGTTGGCGGCATTGGTGGACCTGTTATTGGAGCCGACCAGCAAATGTCGCAGGAGCAAATGTCGGCAGTGGCCGCCGTCGCGCACAATATACGCCAGCAGATGCaaatggcagcggcagcgcagCATCAGCACGGGGAGGCGGGGCCGCCGCCGCATCCGCCACCGCCGCCCGGCTTATTCCAATTGCCGCCACATTTGGCGGGTGGACCGGGCGGCGGACGGGCGAGCATATCGCCGGCGCTGAGCAGCGGGTCCAATCCATCGCTGGTGGGCCCGCCGAGGCATGCGGCGTCGCCGTGCGGTCCCGCCGGACTCATGCCGAATCTGCCGCCCAGCATGGCCGTTGCACTGCATCGTGATCCCAGcaccgctgccgccgccgccgccgctgccgcactgctcagccagcagcagcagcatcacttgcaacagctgcagctgcaacagcagcaacatgcaatgcatcaacagcagcagcagcaacagcagcagcaacaggtgcATCCTcatcatctgcagcagcacaaatcCGGTTTCGGTGCCAGTTCcatgccacaacagcaacatcagcagcaacagcaacaacagcagcaacaactccatcagcagcagcaacagcatcttGGCCTGCTCCATGCGGACAAGTCCAAGGCGAAGAGTAGTCCACTTCGCAGCGAGACGCCCAGTTTGCATTCCCCGCTTACGGATTTGGGTCTGGAGCTGGGCTACAAACGGGACTATTCGCCCAGCCGTCTGTTTGCCGATGATCTGGCTGAGCTGGTGGGCGTTGGCAGCAACGTGGGCATCTCCTCCTCCACATCGGCATCctcaacagccacaacaacggcagcagcagcagcagcgacgcaagCAATTGGCGGAGCAACgggagcagctgcaggagGATTAGGCGGCGTCTCCAGTGAGAtctgctccagcagcagtggcGGTGGCATCAAAGTGGAGCCCATCACAACCAGCAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSSLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDNKDMKDDSLGAHLPPYGRHSPVFSLQDMPLSYPGAGGGMPGSGAASLSALACPNGMGSAAGGGATSGGVGGGVGGIGGPVIGADQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPHPPPPPGLFQLPPHLAGGPGGGRASISPALSSGSNPSLVGPPRHAASPCGPAGLMPNLPPSMAVALHRDPSTAAAAAAAAALLSQQQQHHLQQLQLQQQQHAMHQQQQQQQQQQQVHPHHLQQHKSGFGASSMPQQQHQQQQQQQQQQLHQQQQQHLGLLHADKSKAKSSPLRSETPSLHSPLTDLGLELGYKRDYSPSRLFADDLAELVGVGSNVGISSSTSASSTATTTAAAAAATQAIGGATGAAAGGLGGVSSEICSSSSGGGIKVEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00535235; iTF_00597284; iTF_00552229; iTF_00582885; iTF_00513383; iTF_00500232; iTF_00498794; iTF_00557131; iTF_00609804; iTF_00576269; iTF_00570322; iTF_00543668; iTF_00516917; iTF_00573973; iTF_00560182; iTF_00482156; iTF_00619764; iTF_00527972; iTF_00606988; iTF_00522095; iTF_00525051; iTF_00497308; iTF_00485785; iTF_00495034; iTF_00548730; iTF_00558586; iTF_00593018; iTF_00498075; iTF_00521275; iTF_00566715; iTF_00576987; iTF_00499510; iTF_00616123; iTF_00542364; iTF_00552959; iTF_00501728; iTF_00564576; iTF_00518366; iTF_00511199; iTF_00595872;
- 90% Identity
- iTF_00564576;
- 80% Identity
- -