Doch010409.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila ochracea
Gene Symbol
dl
Assembly
GCA_035044125.1
Location
JAWNML010000059.1:512922-517015[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5 9.7e+03 -3.7 3.1 98 122 28 52 13 63 0.48
2 2 3.8e-74 1.1e-70 236.9 0.0 1 169 66 236 66 236 0.99

Sequence Information

Coding Sequence
ATGTttccaaatcaaaataatttggcCGGCGCTGCGGCAGCAGCCAGCGATGCTCAGCAACAGAACCTCAATTACAATggcctgcaacaacaacaacaacagcagcagcagcagcaacaacagcaacaacaacaacaacaaccacaacagcaacaattgtcaCAGTCGGCGAAGAATGTGCGCAAGAAACCGTATGTGAAGATAACAGAACAACCTGCTGGTAAAGCTCTGCGTTTTCGCTATGAATGCGAGGGTCGGTCTGCGGGTTCCATACCCGGCGTCAATTCAACGCCCGAGAACAAAACCTATCCGACCATCGAGATTGTCGGGTACAAGGGacgcgctgttgttgtcgtctccTGCGTCACCAAGGATACGCCATATCGTCCACATCCGCACAATCTGGTTGGCAAGGAGGGCTGCAAGAAGGGCGTCTGCACGCTGGAGATTAGCAGCGAGACAATGCGAGCGGTGTTCAGTAATCTGGGCATCCAATGTGTTAAGAAGAAGGACATTGAGGCGGCGCTAAAGGCGCGAGAAGAGATTCGAGTGGATCCATTCAAGACTGGATTCTCGCATCGCTTTCAGCCGTCGAGCATCGATTTGAATTCGGTGCGTTTGTGCTTTCAAGTATTCATGGAGAGCGAGCAAAAGGGACGCTTCACATCCCCATTGCCACCCGTTGTCTCTGAGCCGATCTTTGATAAGAAGGCCATGTCCGATTTGGTGATTTGTCGGCTGTGCAGTTGTTCGGCCAGCGTGCTGGGCAACACTCAGATCATATTGCTGTGCGAGAAGGTGGCCAAAGAGGATATCACGGTGCGCTTCTTCGAGGAGAAGAACGGACAGACGGCCTGGGAGGCACTCGGTGATTTTCAGCACACGGATGTGCACAAGCAGACTGCCATTACGTTTAAGACGCCACGCTATCACACCCTCGAGATAACCGAGCCCGCCAAGgtTTTCATACAACTGCGACGACCGTCGGATGGTGTAACCAGTGAGGCTCTGCCATTTGAATATGTGCCATTGGATTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCATCTCAAGCGGAAGCCGGATGAAGACATCTTTCAGCAAATACTATCGATTGATAACGCCAAACGCGAACCGCCCACAATTGAGgtaattgatttgaatacaCCTAATTTGGAGGAACCAGAGCCGATACTGATCGATGAGGTAGCCACAAGGGATGAGGTAGCCACAATGGATAATGAGGCAACAATGAATGAGGCAACAGTGGATGTCACAGATCAGGCGCCACAAGATATGGAGGCCGCCGATGCTGAAGCGGATCGTTTGCGCACCGAACTCGAAATCGATTCGATAATCGATCAAAAGGTGCGCGAAATGGAACAGCTTCAactggagcaacaacagctggaacagcaacttgttgcaacaacgacgacgacaaccaATGACAAGATTAACGAGTGGATAAAGTCCAATgagttgcaacagcagttgccaTACGAAACCAGTTCCGATGCTGCCCCCGCTGAACTCGATGCCGAGGACAGCGATGCACCAAGCGAGGCAACTCAAGTGGCAGCACAAGTGGTGCCTCAAGTGGCAGATGAGGAGGATAAAACGTTGAACGACCTGCTCGAACAGGTGGCCGAGTTGGATGAGATCTATACGGATTTTGTGATGCAACGCGATACGTACAACAATACGTTGCACAACGAGCTGCAGAGCATGGATCGCCAGCAGCCACAACCGCATCCACCGTTGCAGGTGGAGGATAGCTTCGATGATGCAGCCACTTACACAAGTCTGCAGATTGCATTCAAGAATCCCATACACATACCCATGGATGATGACCGGATGCCACCAACGCCGCCCATGTCACAGTGTGCCCCGGAGGATGCACAGCACTACGATGCCGTCGAGGTGAACTCGCAGCGTGAACAGGAGCTCAAGCAGCAGGCTGTCCtccagcaggaggaggagaagtTGCCACCTTTGCCGCCGAAACGTTTGCGCAAACAGGATAGCAATGCCGAGAATCGTTCCATTGAtgcaaattgcagcaatttgCCAACGGCCCCGCCCGTTCTGCATCCAAGAAACTCGGAAGCTGTTGCGCCCACAAAACGCTTGCCACATCCCCCGCCGACGGAGCTGAAAGCCAAGCCCAAATCAAAGCCCGCAAAGAATCCCAATTTTAATACGTTGCCGCGTCAAAAGAAACCCGGTTTTTTCTCCAAACTCTTCTCGCGCCGCAAAAGCAAACCCGAATTGTCGTTGGACAGCAGCGAGAATTGCTCCAAAAATAATAGTACCTTAGCAAGTCGCGAGCCCAGCATGGAATCGAATCTAAATATGCGTAAAACAGAGAAAGCAAATGTGGCAAGTGCGGCAAGTGCCACACGCAAGTTCAACAAGACGAGCAAGCCGTGTGGTCGCAGCGTGAGCAGTGTGTCTGGCAAGAGACCCacgtatttaaatgcaaatgtggtGCACATACCACTCAAGGGTGACAGTGCGAGCAGCTTGCAACAGCCCACAAATGAGGCATACTCGAATGCCAGCACCATAACAGTGGGTGGGCAGCTGGACAGACGCACTGCATCCGCGCTGCAATTGGCCGAGATACCAATCAGCGAGGGTGGCATGGAATTGGTTGCCATTGCCGATCGTCAGAGTCTCCACAATTTGGTCAGCTCAATTGAGGCACATTTCAATGTGAAAATGGATCCCAATTTGGATTTAACCGAAGTGGAACACTTTGCTTTGTATACGAGTGTGCCGCCCCAGGCAACAGCCAGTGAGTTTGATGAGACATCCGCTTACTATGCCTCCGTGGATGCGGGCGAGATCTTAACACCCGAACAGGTGGCCAAACGCTTGGTGGCAGCTCAAAATGGTAGCAATTga
Protein Sequence
MFPNQNNLAGAAAAASDAQQQNLNYNGLQQQQQQQQQQQQQQQQQQQPQQQQLSQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTAWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILSIDNAKREPPTIEVIDLNTPNLEEPEPILIDEVATRDEVATMDNEATMNEATVDVTDQAPQDMEAADAEADRLRTELEIDSIIDQKVREMEQLQLEQQQLEQQLVATTTTTTNDKINEWIKSNELQQQLPYETSSDAAPAELDAEDSDAPSEATQVAAQVVPQVADEEDKTLNDLLEQVAELDEIYTDFVMQRDTYNNTLHNELQSMDRQQPQPHPPLQVEDSFDDAATYTSLQIAFKNPIHIPMDDDRMPPTPPMSQCAPEDAQHYDAVEVNSQREQELKQQAVLQQEEEKLPPLPPKRLRKQDSNAENRSIDANCSNLPTAPPVLHPRNSEAVAPTKRLPHPPPTELKAKPKSKPAKNPNFNTLPRQKKPGFFSKLFSRRKSKPELSLDSSENCSKNNSTLASREPSMESNLNMRKTEKANVASAASATRKFNKTSKPCGRSVSSVSGKRPTYLNANVVHIPLKGDSASSLQQPTNEAYSNASTITVGGQLDRRTASALQLAEIPISEGGMELVAIADRQSLHNLVSSIEAHFNVKMDPNLDLTEVEHFALYTSVPPQATASEFDETSAYYASVDAGEILTPEQVAKRLVAAQNGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00582730;
90% Identity
iTF_00497153;
80% Identity
-