Dobs011240.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila obscura
Gene Symbol
Rel
Assembly
GCA_018151105.1
Location
NW:5263264-5266978[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-53 1.4e-49 168.0 0.8 1 168 135 317 135 318 0.95
2 2 2.1 7.7e+03 -3.6 0.1 122 164 571 613 567 614 0.73

Sequence Information

Coding Sequence
ATGAACCACATCTACGATTTGGACAAGGGCAAGAACGTTCTGTACGTGAACGACGCCTCCAGCACGAGTGGATATAGCAGCGAAAATTCGGCAACATCGACAATGTCACCAGCACAATCCCCCGAAACATTGACGATGCAAAATGATTTTGCAAATCTGAATCTACCACAGACGAACTCACCTCAACCGCCGCCGCTGCAGAGTTCACCATACCAGCTGTTAAATATCGATGCCAGCAATTTTTTGGGCAGCAACGCCACGAATGCCACGGATTTTGGAATTGGAAACATGTTTGTGGATCACCATTACTTCGCCCAGGCCCCCGACACAATACCGAACTTTGGATACCAACGAAGCAATGGCGTGCAGGCCAATTCGGAGTTGGGACACATGCCCGCTGCCCTGCGCATCGTGGAACAACCTGTGGAAAAGTTTCGCTTTCGCTACAAGAGCGAAATGCACGGAACACATGGCTCGCTCAACGGTGCCAACTCGAAGCGCACACCAAAAACGTTTCCCGAGGTGACGCTCTGCAATTACGATGGACCGGCGGTGATACGGTGCAGCCTCTTCCAGACGAACCTCGATAGCCCACATTCGCACCAGTTGGTGGTGCGCAAGGAGGAGCGCGATGTGTGCGATCCGCACGACCTGCACGTGTCCAAGGACCGCGGCTATGTGGCCCAGTTCATCAACATGGGCATCATACACACGGCCAAGAAGTTTATATACGCTGAGCTCTTGAAAAAGAAGCAGGATCGCCGGGTGTTCGAGATGAAGCGTCGCGAGCTGTCcaaaaaggagcagcagacgcTTCACCAGGAGACAGAGCGCGAGGCCAAGGATATGAATCTGAATCAGGTGCGTCTCTGCTTTGAGGCCTACAAGATCGAGGACAATGGCGATTGGGTGCCCATTGCCACGCCCGTCTACAGTAATGCGATCAACAATCGCAAATCGGCACAAACGGGAGAGCTGCGCATTGTACGGCTGAGCAAACCGACGGGCTCTGTGCTGGGCAACGATGAGCTCATCCTGCTCGTGGAGAAGGTCAGCAAGAAGAACATCAAGGTGCGCTTCTTCGAGGAGAACGAGGATGGGGAGACTGTGTGGGAGTCGTATGCCAAGTTCCGTGAATCGGATGTCCATCATCAGTATGCCATCGTTTGCCAGACGCCCACCTATAAGGACAAGGATGTGGACAGAGAGGTGAATGTCTTCATTGAGCTGATACGACCATCGGACGACGAGCGCTCCGTCCCGCCGCTGCAGTTCCGTTACAAGCCACGCGATGCCATCGCCTCGCGTAAACGCAGGCGCACATGTTCGATGGCCACCAACAGCAGTTCGGGCGGCAGTGCCCAAAACTCGGGAGATCTGCCCAGGACACTGGCgtaccagcagcaggaacagcaagTGCCCATGGGGGAAACGTCCGTCGGGTACAACGATCAGACCATCAGCCAGGAGTTTGGACGAGATAGCGTACTCAATGGCCTGATCTCAACGGAAAAATTTCGCGAGCTTTGCGATACGAGAAGCGATGAACTTGAGCGGATGTGTACTCTGAGCGGTCTGGACAGTCTGCTCCACCATCCTGATGGCGTCCTTCAGGAAGATGGCCATGGACAAGCAGCGGAGCGACCGGCtaccccagcagcagcagcacccaaccGCAATTTGACGCCACACTTTTTAAATACAATCTTCAAGATCTACGAGGCACATCGTCGATCACCAAATGACACCTCGCGCAAGCAGGTGGAGGAGTTGTTCACGGAACACGCCCTGCGGAACGATAACAACGACACGCTGCTGCACGAAGTGATCATCAGCCAGCGGACAGAGGGACAGCTGACGCAGGCCATCCGCACCATTGAGGTGATGAAATACTTTAAGCTGCACGATCTGGCGAACAACGCCCTCAATGCGGATGGGGATAGTGCCCTGCATGTGGCCTGTCAGCATGATCGCGAATACTACATTCGCCCACTGCTGAGCCTTGGATGTAGTCCAAATCAGCAGAATCATGCGGGCAATACGCCGCTGCATATGGCTGTGAAGGAGGAGCGAATGTCCTGCATCGATAGCTTCCTGAAGGGTGGCACTGGCACGCCCACCGTACGGCTGGACCTGACGCTCAAAAATGACGACGGATTGACGCCACTCCATATGGCCATTCGGCAGAACAAGTACGATGTGGCCAAGAAGCTCATCAAATATGACCGCAGCTCGATTAGTGTCGCGAATACAAAAGACGGCAACAATGCCCTACACATGGCGGTGCTCGAGCAGAGCTATGCACTGATTGTGCTCATTGTAGATGCCCAGGACACGACCCTCTCGGACATACTAATGTCGCGCAATTCGGCCGGTTATACGCCGCTGGAGTTGGCGCGTTGCAAGGGCGACGAGCAGgtgttgcagctgctggacAGAGTGTATTCGGAAAAGAATGATGCGGCGGCCATGACCTGGATACCCAACAAAATCAAAGAGGAGCTAGACACCTCCTCCGATGAGAGCAGCGAGGCAGCGCTCGAGATCAAAACCGAAGTTATGGGCATCAAAACGGAGTCGTCGGAGGAGGATAGCAGCGAAATGGAACTGGACGGCAATGAAGTTGTTGGCAACGAGACGGAAGTGGAGACGACCATCGATTCCAAATACAatcttcagctgctgctgagcaACAAGCAGCGTTTCGAGAAGCTAAAGACACTGCTAAACGAACCGATGGGCAGCGGACCGTATGCCAATCAGCCTAAATGGAAGCATTTGGCACGCATTTCGCACATGGAGCGTTTAAGTTTCTTTTGGATGAGCGCCGAGAGCATGCTCGATTATATACTGAATAATGCCAAGTGTGTGGAGTACAGCACCTTTGCCATGGCCCTCGAATCAATCGATTCAGAGGCATCGGCTCTGCTTAATTAA
Protein Sequence
MNHIYDLDKGKNVLYVNDASSTSGYSSENSATSTMSPAQSPETLTMQNDFANLNLPQTNSPQPPPLQSSPYQLLNIDASNFLGSNATNATDFGIGNMFVDHHYFAQAPDTIPNFGYQRSNGVQANSELGHMPAALRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKEERDVCDPHDLHVSKDRGYVAQFINMGIIHTAKKFIYAELLKKKQDRRVFEMKRRELSKKEQQTLHQETEREAKDMNLNQVRLCFEAYKIEDNGDWVPIATPVYSNAINNRKSAQTGELRIVRLSKPTGSVLGNDELILLVEKVSKKNIKVRFFEENEDGETVWESYAKFRESDVHHQYAIVCQTPTYKDKDVDREVNVFIELIRPSDDERSVPPLQFRYKPRDAIASRKRRRTCSMATNSSSGGSAQNSGDLPRTLAYQQQEQQVPMGETSVGYNDQTISQEFGRDSVLNGLISTEKFRELCDTRSDELERMCTLSGLDSLLHHPDGVLQEDGHGQAAERPATPAAAAPNRNLTPHFLNTIFKIYEAHRRSPNDTSRKQVEELFTEHALRNDNNDTLLHEVIISQRTEGQLTQAIRTIEVMKYFKLHDLANNALNADGDSALHVACQHDREYYIRPLLSLGCSPNQQNHAGNTPLHMAVKEERMSCIDSFLKGGTGTPTVRLDLTLKNDDGLTPLHMAIRQNKYDVAKKLIKYDRSSISVANTKDGNNALHMAVLEQSYALIVLIVDAQDTTLSDILMSRNSAGYTPLELARCKGDEQVLQLLDRVYSEKNDAAAMTWIPNKIKEELDTSSDESSEAALEIKTEVMGIKTESSEEDSSEMELDGNEVVGNETEVETTIDSKYNLQLLLSNKQRFEKLKTLLNEPMGSGPYANQPKWKHLARISHMERLSFFWMSAESMLDYILNNAKCVEYSTFAMALESIDSEASALLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00517485;
90% Identity
-
80% Identity
-