Dnov007765.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_003285875.3
- Location
- NW:1750745-1751332[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-27 3.6e-23 80.3 0.4 1 51 75 125 75 126 0.96
Sequence Information
- Coding Sequence
- ATGGCAACGCAGTCGACGCAAATTATTTGCGCCAAATATTTTATCAGCAAGCAGCAATTCAGTCTCGaattaaaaatgccaaaaatcagGAAGCAAAAAAGTTCCTCGTCTGACAGTGACAGCGGTCCGGATGATCGTAATCCACCGCCAAGCAAAAAGGCCAAGGAGACCGGCACCGCGGAAAAGTCAAAAAAGGATGATGGAGATGGTGGTGTTAGCACATGGACACTCGAGGGCATGCGTCAGGTGCGCATCAATGAGTTCCGCGGCAAAAAAATGGTTGACATACGCGAGCACTACGAGAAGGATGGCAAAGTTTTGCCGGGCAAGAAGGGTATCTCGCTGTCTGCTACCCAATGGAAAAAGTTACTCGCAGTAGCAGACGATGTCAGCCGCGCTCTAGAAGAGTGA
- Protein Sequence
- MATQSTQIICAKYFISKQQFSLELKMPKIRKQKSSSSDSDSGPDDRNPPPSKKAKETGTAEKSKKDDGDGGVSTWTLEGMRQVRINEFRGKKMVDIREHYEKDGKVLPGKKGISLSATQWKKLLAVADDVSRALEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00559491;
- 90% Identity
- iTF_00506113; iTF_00616906; iTF_00530956; iTF_00526578; iTF_00550898; iTF_00475219; iTF_00534582; iTF_00490782;
- 80% Identity
- iTF_00616906;