Dnov006775.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- Trerf1
- Assembly
- GCA_003285875.3
- Location
- NW:426044-460151[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 1.5e-06 27.8 0.1 2 45 1754 1797 1753 1798 0.93
Sequence Information
- Coding Sequence
- ATGGCTGCCATAAATACGGTACCTAAGAGCATACACCTGCCATTGACGAATCTCAGCGCACCGCGCGTGCTGATGTGCAGCGCATCTGTCGGCAGCGAGGGTTCCGTAACACTGCAACTAAGAGATGCGAATGCCTTGGAGGCAGCCGACAgcacgacaacagcaacaacagcaccagcaacaacaatagcaaccaATGCAATATCAACATCGTCATTAGGCACCCAAGCGAATGGCGTCACAGTGCTTGAAACGTTCTCGGCATCGTCAGGAATAACGTCAGCATTGGAGAATGCGCTGACCATTGGCTATCCGGATCCGGACATGTTAGCAGATGTCTTGGGCACCATACAGACCGCCTcatttaaaaacaaacaaactagCAGCAATACTAACATCTATAGCAACAACAGTAAGCGAAGTAGCTACATCAATGGTAGCAGCAGAAGAAACAGCAGCACTTCAACAACAATTCTGAACAACACCCTAGCAACAACGAGCTCTGGAGTTCATCTGGCCGgtccaaataaaataacgatAACGCGACGCAGTGCCAGCAATAAGATCAGCGTGCAAACTGTTAGCGCTTCCACAAATACAACCATTAGCAGCATTGGCGGCAGCAAGACCAACTACATAAAGAACTGTCTGATacggagcagcagctgcagcaacacgGCCACCAATGTCACGACGCTGGCGCAGATtatgagcaacagcagcaccagcagcgcaGCCAGTTTACTCAGTCAgcacaataataatagcaactgcagcaacagcagcaacttcaGCAACGCCTCATCCGTGGGCAGCAGCATTAgcattggcagcagcagcagcagcaacagcagcagtaacgacagcaacagcagcagcggtcacagTTTGAGCTTCAAGAGCAACGGTCGAAATGTTCCTGGTATTGTAACTGCAGCAGCATCCACGAACACCACAGGCACCGGCATTGGCATTATTACCGTCGATAACGCACCCAGAAAGAGCCGACCCAAACTATCCTCGCCGACTCGTCACGGACCCCAGCAGTGTCAGATTTGTAGCAAGATCTTTGGAAATGCTTCGGCACTGGCCAAGCACAAACTGACGCACAGCGACGAGCGGAAATATATTTGCGCGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACGCATCGCAACAAGAAGCCTTACGAGTGTAAGGCAGATGGCTGCGGCAAATCATATTGCGATGCGCGTTCTCTTCGCCGTCATTCAGAGAATCACCACGGAGGCGTGGCAACGCTCAATAACAACTCACTCTCGCCCACAGCTAGCTCAAACTGCGGCAgcggaagcagcagcagcagcagcagtagtgTGGGTGTGACCACCAGCTCACTAAGTCTTTCACCGGCTACAGCTAGTGGGGACGCCAGCTCGCCAGATGGGGCCACTTGCATTCGTACCTACATTTCCACAGGCAGCTCTGTGGTGGATGCTGCCACTGGCATTGCGCTGTCCGATGAACAGATCAAGGCTATGAATTTGCCAATTAAAACGGGAGTCACATTGCTGTCGCCTACCACTTCGACATCCTCAATAGCATCGTCGACAACATCATCATCTTGCTCAACATCTGGCGGTAGCGGCAGCTCCGTTCTGACTAGTTCGCCCACAATTACGCTTAGTGATGGCGCAACCTTAGAGGGCGATGGACTAACGCGCGAGCAACTCGATCTCATAAGCAAGATCATGCAACAGACTAAGCAAACCAGTGCCCAAGTGACGGTCTCTTCGCCCAACAGCGTCAGCTCCTATAAGATCAATACAGAGACGGCACCAGTCTCGGCACGTCCACGCACGTGGAACATGCAATTGCTCAATAATGCGCAAAATGTCACCGTTACCGTGGAGGATGGTACAGATATGGTTGCCTCCGCTTCAAGTTCACCTGACGAGGTCAAGGACGATGAATTGAACCAGCAGCTAGTGGCCGCTATTAATCCCCACCTGCTCAATATTGTTAAGATTGACAAGCCGGTTGAGTGCAATCTATGTCACCGCAAGTTCAAAAATATACCCGCTCTCAATGGGCACATGCGTCTGCATGGCGGTTACTTTAAAAAGGATCCGGAAACCAAGCGCAGCGAGAAAAAGGACTCCAGCGGACCGCCCTTGCAGACTGCGAGCATAGGTGTGCGTGCCCTTATCGAGGAGAAGATCATTAGTAAGCGCAAGGACATCAATAAGGGCGCCTTCGTTGTGCCTGCTCCACCCAGCAGCACCGCAAACAACGGAGGTGTTGGCAGctgtagcaacaacagcaacagtctGCGCCGCTCCTTAAGCGACTTAGAGAGCTTCTTAAGCCCGAAGAGTAACACGAGCAGCCTGAGCCAGGCACTAGCCACCAGCACCAGTACTACTACAGCGGTGCTGCCCGCGGCTACCACTATCAAGAGCAGCTCTGGGCTAAGTATACAGCAGATTGGACTGCCGCAAAGTATTGAGATCTTCAGCGGAGGTCACAGACATCCCAAAACCCTTAATTTGGGCAGTGGCGCCAATACAATTACCATTACCACCAACAACGTgccaacgacaacaaccaTGAGCGCACTGACGGCTCTTAAGGGCGGCGGTAGCATCAGTGGCGTCACTAGCAATGCGGACTCCAAAGACTCGACGTTAATTGAGTTACTTAAGCGTGGAACGCGCATTGCCGTGGCCTCTAAGAAAACACAGCTACAGGCACAAAACAGTACAAATCTGATCTTAAGCAATGTTGGCGGCTCGGAGCTCACAACCATTAGCAGCAGTGTCCAGGCTGGTCGGCAGATTATCACCAACAACAATCGCACCGTCATCATACCTTCTGATGTGCACGTGGTGTCCACCAAGAGCAAGTTAATTTCTAGCAACTCCCTCACAACCAACGACAGCAATACAACTTGTTCTGCAAGCAGTATATCATTGCCAGACGGGACTCCCCTCTCCCTGACCATAACGCCCAGCCAGGAGAGTGTAGGTGTCGGTGAAGCAAACAGCATAGCTGGTGGTGGGGGTGTTTACACTGTTACTTACACTTCCGATGCGGATGCATCGGATCTCTTCGAAGACGCTGAGGTGTACAATGTATCGGACACGGAAATGCTACTGCAAACTGTGGATACTATGGAACTGCTCAACGATGACGAGGACGATGTGCACAAAAGCGAACATTCCGAGGACTTTTCGCTGCTCAGTGAGGCCAGCGATAATGTTCACACACGGCTGGTCAAGCTGGAGCCCGATCCTGTACACAGCAGCACAGCCAGCAGCCTCAATAAAACGACGCCGTTGCCCACCTTTCAGCAATTTCATTCCAAAGAGATTATCATGCAGAACAGTTCTCAAATCCAGGCCATCGCCAACATGCGTGGAAACAGCACCCTAGGCTTGCTCTCGTCACCGTTGCATTCGCCACTAGCCTACCCGACGCCACCCTCCAGCCACGAGAATGTGGCTCAATCTTCACCCTTTGTAGAGGATGCTGCGGCTCAGTTTGTGGATGCCAGTCACACGTTCTTTGGCGATAAAACAGACTTCTCACACGTCTATTTTAAAACAGACGAGAGCGATTCCATGCAGCAGCTCAGTGATAATGACAACGAGAAAATACTTAAACTAAAGTCGGTGCTGGAAGAAAGCAGCTTCGATCCATCCATTAAGGTGGAAGATCTCTTGAACAGCACCGAGGACGATGCCGAATGCGACCTGCGGGAGTTTGCCGAGACGAATCTCTCATTTCTCGATGAGGATCAGGAGTTCCTAAATGACTCACGAAATGCTACCTCGCCTCTGTCTGAGTCCTTCTTCACCAGTGGCATTGGATCTGCAGAGGATGTTAAGCAGGTGCTACGTGAGGTGCTGCCCGATGAAAATATGCAACTGCAGCTAACTAGCGAGCAGCAGGGCGAGAACATCATTGATCTTTACTATTTACCGGGGCTGGGCCTGCAATCCCAAATGATGCCTAACTCTGATGATCCACTTTTGTCCTCCTCACCAAGAGAATTCGGTCAGCAGCGACAGGTTGTCCACACGACAACGTCTACGACATCGACCACACAACCTATCGAGCAGTTGCAGTCTACCACTGTACTTTACGACCAACatcaactgcaacagcaactgcaactgcagccccagcaggaacagcaagagcaacatcagcagcaacagcagcagcaacagcagcagcaacagcagcagaaacagcagcagcaacagcagcagcaacagcaacagcaacagcaatctcagcaacagcaagagcaaatgcaattgccacAGCAATCTGCAATTCAATCTGAACAAccagaacagcagcaacagacagACTTTATGCTCACCAACTTTACTCCCGTGTCCTGTCAAACACAGTACCTAGATGCCACTCAGCAGTCGATGATGCTGCAGCCACTGAATAGTTTGCTGCAGCCAATACTTtatggcagcaacagcgcaTCCAACGATAAACAAGCATTTACCTCGATGCTTAACTCGAATGCCGGTCAGACAACTGAACTGGATGCGAGCCTGCTCTTTGCCTGCGGCGACAGCATCAAAAATAACTGCAGCAAACCTATGCTTGCCGCATTACCTGCAGCAGTAGCTACACCAGTAGTCACAGCAACACCGAGCGTTTCCAATCTACAGCCGCTGTCCAACCAAACTAATTCCATCTTAAAGCGTCGCCTGCGTTCAAATGGAGCACAGGATGTGCACAAGTTCTCGAAATTCCAAACACTTTCCCCGCATCGCTCAAAGCTACGCAAGCCTTCGCGGACACACTACACACCCGCGCCAATTCTTAATCCAGATCGCAAGGGCACAGGACTCTATTGCAATGTGCGTAAGCAGCTCGGCCAAGGAATGTTTGACGTCTTTGACGATGACTTTGGCGATCCTGTGGGGTTGGTTGATTTCTGCGATGAGTCCAAGGTGAATCTTGGATCCACTTATCAAGCGCAGATCCCAGCCTGCAAATCGCCAGAAGAATCAACCAAGGAAACAATGAGTGCAGACCTACTTTGGGATCCAAGCGTACAGATAGACGAGAAGATACTAATGCGTTATATAGATCTCAGCAAATCTTCGGCCGTTCCCATGGGTAGCCATTCCGAAGAGGTAGCCCTTCAAACGCTGCTCGAGGCCAAAGGCAACTCAGCGGCGGCTGTGCTCACCCTGTTGCAAACGCAGTCCAGCGCATTCCAAATGAAATGGACTGCCTATGAGCTAGAGCAGTTTCTACGTGGTCTGGAGAAGCACGGGAAGGACTTTGGAAAAATTGCCAGCGAGTTACTTACGAAGACTTCGGGCGAATGCGTtcaaatgtattatttttggaaaaagCTATGTGTGGACTACAAGGTTTCTCACCTAAAGATGGAGCCAGTTCCTGCCAGCACCCCAATAGTGGAACAGAAGCCCTACGTCTGCGAGATTGCCGATTGCTCGGCGAGCTTCACCTCAAAAGCAGCTCTGCATGGTCATGTTCGCATACACGCTTATGGCAGAAATGCCAACAACAgtaatagcaacaacaacaaccagcatGCCACGGCAGTTagtgccaacaacaaccacacttgcaacaatagcagcaacaacaatagcaacaacgcATGCGCAACCCAGACTAGTAGCCATACCAATCAATGCAacagtgcaacaacaacaatcataaCGCACGCCAATGGCAATAACTCCACCctcaacaacaatattatcagcaacaacattgcACCAGGCTCTTCCATAAATACTGCTCtgttatcagcagcagcagcagcagcagcagcaacaggaacagcaTCGACAGCATCAaaagacagcagcaacagcagcaattccAATACAGCCAAGGAGAGTGAATTTCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTCAAAAGCCGCAGTGCCCATATGAAAACGCATCGAGTACAAGAAGCTGAACAATCATCCAATTCCAAACAGCAATCTAACAATGGAACTCTGTCTGCAGTAGCAGTGGCAGTAGCAGCATCAGCAGTACCATCGGCTCCCTCTGCAGTAACAGTTCTGGCCACCGCATCTTCTTAG
- Protein Sequence
- MAAINTVPKSIHLPLTNLSAPRVLMCSASVGSEGSVTLQLRDANALEAADSTTTATTAPATTIATNAISTSSLGTQANGVTVLETFSASSGITSALENALTIGYPDPDMLADVLGTIQTASFKNKQTSSNTNIYSNNSKRSSYINGSSRRNSSTSTTILNNTLATTSSGVHLAGPNKITITRRSASNKISVQTVSASTNTTISSIGGSKTNYIKNCLIRSSSCSNTATNVTTLAQIMSNSSTSSAASLLSQHNNNSNCSNSSNFSNASSVGSSISIGSSSSSNSSSNDSNSSSGHSLSFKSNGRNVPGIVTAAASTNTTGTGIGIITVDNAPRKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHGGVATLNNNSLSPTASSNCGSGSSSSSSSSVGVTTSSLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSDEQIKAMNLPIKTGVTLLSPTTSTSSIASSTTSSSCSTSGGSGSSVLTSSPTITLSDGATLEGDGLTREQLDLISKIMQQTKQTSAQVTVSSPNSVSSYKINTETAPVSARPRTWNMQLLNNAQNVTVTVEDGTDMVASASSSPDEVKDDELNQQLVAAINPHLLNIVKIDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKRSEKKDSSGPPLQTASIGVRALIEEKIISKRKDINKGAFVVPAPPSSTANNGGVGSCSNNSNSLRRSLSDLESFLSPKSNTSSLSQALATSTSTTTAVLPAATTIKSSSGLSIQQIGLPQSIEIFSGGHRHPKTLNLGSGANTITITTNNVPTTTTMSALTALKGGGSISGVTSNADSKDSTLIELLKRGTRIAVASKKTQLQAQNSTNLILSNVGGSELTTISSSVQAGRQIITNNNRTVIIPSDVHVVSTKSKLISSNSLTTNDSNTTCSASSISLPDGTPLSLTITPSQESVGVGEANSIAGGGGVYTVTYTSDADASDLFEDAEVYNVSDTEMLLQTVDTMELLNDDEDDVHKSEHSEDFSLLSEASDNVHTRLVKLEPDPVHSSTASSLNKTTPLPTFQQFHSKEIIMQNSSQIQAIANMRGNSTLGLLSSPLHSPLAYPTPPSSHENVAQSSPFVEDAAAQFVDASHTFFGDKTDFSHVYFKTDESDSMQQLSDNDNEKILKLKSVLEESSFDPSIKVEDLLNSTEDDAECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLTSEQQGENIIDLYYLPGLGLQSQMMPNSDDPLLSSSPREFGQQRQVVHTTTSTTSTTQPIEQLQSTTVLYDQHQLQQQLQLQPQQEQQEQHQQQQQQQQQQQQQQKQQQQQQQQQQQQQQSQQQQEQMQLPQQSAIQSEQPEQQQQTDFMLTNFTPVSCQTQYLDATQQSMMLQPLNSLLQPILYGSNSASNDKQAFTSMLNSNAGQTTELDASLLFACGDSIKNNCSKPMLAALPAAVATPVVTATPSVSNLQPLSNQTNSILKRRLRSNGAQDVHKFSKFQTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCNVRKQLGQGMFDVFDDDFGDPVGLVDFCDESKVNLGSTYQAQIPACKSPEESTKETMSADLLWDPSVQIDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLEAKGNSAAAVLTLLQTQSSAFQMKWTAYELEQFLRGLEKHGKDFGKIASELLTKTSGECVQMYYFWKKLCVDYKVSHLKMEPVPASTPIVEQKPYVCEIADCSASFTSKAALHGHVRIHAYGRNANNSNSNNNNQHATAVSANNNHTCNNSSNNNSNNACATQTSSHTNQCNSATTTIITHANGNNSTLNNNIISNNIAPGSSINTALLSAAAAAAAATGTASTASKDSSNSSNSNTAKESEFPCKVCGKVFNKVKSRSAHMKTHRVQEAEQSSNSKQQSNNGTLSAVAVAVAASAVPSAPSAVTVLATASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00531181;
- 90% Identity
- iTF_00491009;
- 80% Identity
- iTF_00563411;