Dnov001632.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- -
- Assembly
- GCA_003285875.3
- Location
- NW:5702617-5703886[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.24 4.3e+02 0.9 0.1 11 68 30 87 21 102 0.70 2 3 2e-11 3.7e-08 33.2 0.0 10 89 132 201 128 201 0.82 3 3 1.5 2.8e+03 -1.7 0.1 70 84 253 267 239 271 0.62
Sequence Information
- Coding Sequence
- ATGAACAATCCGCGAGAGCATCTGCATTGCAGCAGAAGAGGCTGCAGCTACACTACCAACAGGGCATATAACCTAGAACGACATGAACGGAATCATGACAAGGGCAAGGTACCAATATCGCAGTGCCAGCCGTGTCCGCACTGCAAATATGCCGCCGGATCACTTCACAATTTAATGAGACATATAAGTAAAAAGCATACAGAATCGACGGTAAAAACACAGCAACAGGTTGCAGCTAGCCAACAAGCAGATCAGCAGAATGAGCTGCCTTCTACAAAGAAGTCCATGTTCAATTTAGAGCATAATCCAAAGCTGGAGCAGACTGTGCAGCAGCCACTGGAACAATCCGCAAATTCATCGCTTTGGTTTTGGAGCACGCCGCAGCAACAGGAGAGGAATTTCCTTAAGCGAAGTGGCCTAAAGGCCGAATGTAAGATACTAGAGCGCAGCGTGAATCTGTTCAAATTGTACGCACTGGTGAAAGCTCGAGGAGGAGCTCTGGATGTGGATGAGTGGGATGATATCGCAGCAGCCCTAGGCCTGCCACCAGGATCAGGCTGTAATGTTGGCGTCAAGTACATGAAGgtgatttttgaatttgagAAGAAAGAAGAAGTCCGTTTACAAGAATGCATAAAAGTTGACGGCGTGCCGCCTTGGTGGGACGACGGTGATTTTATCGAGGACAACATGAATTGTTTATACGGAGATTCTGATTGGTGTAGCAGCGGGTGGAAAGACATGAATCGTCAGTCTACTACTGTACAAAATGCtgtaattaaaatgatttacgATAAGTATTATAGGAATCACGTAAGCAATAGCAAACCGTTTCAACGCTTCAGCGTGAAGGACTCGTGGCTGCGAGCAACAATGTTGAATTATCAAGCGCTAAAGTCTCAACTACATTTAATTCATAGTTCTGCTTTTTGA
- Protein Sequence
- MNNPREHLHCSRRGCSYTTNRAYNLERHERNHDKGKVPISQCQPCPHCKYAAGSLHNLMRHISKKHTESTVKTQQQVAASQQADQQNELPSTKKSMFNLEHNPKLEQTVQQPLEQSANSSLWFWSTPQQQERNFLKRSGLKAECKILERSVNLFKLYALVKARGGALDVDEWDDIAAALGLPPGSGCNVGVKYMKVIFEFEKKEEVRLQECIKVDGVPPWWDDGDFIEDNMNCLYGDSDWCSSGWKDMNRQSTTVQNAVIKMIYDKYYRNHVSNSKPFQRFSVKDSWLRATMLNYQALKSQLHLIHSSAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00505895;
- 90% Identity
- iTF_00550722; iTF_00490567; iTF_00505895; iTF_00530740; iTF_00616692; iTF_00475002;
- 80% Identity
- -