Basic Information

Gene Symbol
-
Assembly
GCA_035045725.1
Location
JAWNOU010000036.1:5736647-5737603[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.24 5.2e+02 1.3 0.1 12 69 31 88 21 106 0.68
2 2 9.3e-12 2.1e-08 34.6 0.0 10 89 125 194 121 194 0.82

Sequence Information

Coding Sequence
ATGAACAATCCGCGAGAGCATCTGCATTGCAGCAGAAGAGGCTGCAGCTACACTACCAACAGGGCGTATAACCTAGAGCGACATGAACGGAATCATGACAAGGGCAAGGTACCAATATCGCAGTGCCAGCCGTGTCCACACTGCACATATGCCGCCGGATCTCTTCACAATTTAATGCGACATATAAGTAAAAAGCATACAGAAACGACGGTAAAAACACAGCAACAGGTTGCAACTAGCCAACAAGCAGATCAACAGAATGAGATGCCTTCTACAAAGAAAGCTCCAAAGCTGGAGCAGACTGTGCAACAGCCACTGGAACAATCCGCAGATTCATCGCTTTGGTTTTGGAGCACGCCGCAGCAACAGGAGAGAAATTTCCTCAAGCGCAGTGGCCTAAAAGGCGAATGTAAGATATCAGAGCGCAGCGTGAATCTGTTCAAATTGTACGCACTGGTAAAAGCTCGAGGAGGAGCTCTGGATGTGGATGAATGGGATGATATCGCAGCAGCCCTAGGCCTGCCACCAGGATCTGGCTGTAATGTTGGCGTCAAGTACATGAAGGTGATTTTCGAATTTgagaagaaagaagaagaccGTTTACAGGAATGCATTAAAGTTGACGGTGTGCCGCCTTGGTGGGACGACGGTGATTTTATCAGCGacaacattaattttttatccGGAGATTCGGAATGGTGTAGCCGAGGGTGGAAAGACATGAATCGTCAATCTACTACTCAAACCCTTTCAACGCTTCTGCGTGAAGGACTCATGGCTACGAGCTACAATGTTGAATTATCAAGCGCTAAAGTCGCAACTACATTTATTACATAG
Protein Sequence
MNNPREHLHCSRRGCSYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTETTVKTQQQVATSQQADQQNEMPSTKKAPKLEQTVQQPLEQSADSSLWFWSTPQQQERNFLKRSGLKGECKISERSVNLFKLYALVKARGGALDVDEWDDIAAALGLPPGSGCNVGVKYMKVIFEFEKKEEDRLQECIKVDGVPPWWDDGDFISDNINFLSGDSEWCSRGWKDMNRQSTTQTLSTLLREGLMATSYNVELSSAKVATTFIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2