Dnov005480.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila novamexicana
Gene Symbol
dl
Assembly
GCA_003285875.3
Location
NW:479774-496834[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4 1.1e+04 -4.3 3.0 114 130 31 46 18 58 0.42
2 2 2.6e-74 8.2e-71 236.9 0.0 1 169 63 233 63 233 0.99

Sequence Information

Coding Sequence
ATGTTtccaaatcaaaataatttggcCGCTGCGGGTGCAGCAGGTGATCCCCAGCAGCAGAACCTCAACTACAATggcctgcaacaacaacaacagcagcaacaacagcagcaacaacaacagcagcaacaacaacaaactcaaCAATTGTCACAATCAACCAAGAATGTGAGAAAGAAACCGTATGTGAAGATTACGGAGCAGCCAGCCGGAAAAGCGTTGCGTTTCCGTTATGAATGCGAGGGACGCTCGGCGGGTTCCATACCCGGCGTCAATTCCACGCCCGAGAACAAAACCTATCCGACCATCGAAATCGTCGGCTACAAAGGACGCgccgttgttgtcgtttccTGCGTTACCAAGGATACGCCATATCGGCCACATCCGCATAATCTGGTGGGCAAGGAGGGCTGCAAAAAGGGCGTCTGCACACTGGAGATCAGCAGCGAGACAATGCGAGCCGTGTTCAGCAATTTGGGCATCCAGTGTGTCAAGAAGAAGGACATCGAGGCGGCGCTGAAGGCGCGAGAAGAGATTCGCGTGGATCCGTTCAAGACTGGGTTCTCGCATCGTTTTCAGCCGTCGAGCATTGATCTGAACTCGGTGCGTTTGTGCTTTCAAGTATTTATGGAGAGCGAGCAGAAGGGACGCTTCACATCGCCCCTGCCGCCAGTTGTCTCCGAGCCGATCTTCGACAAGAAGGCCATGTCCGATCTGGTCATTTGCCGTCTGTGCAGCTGCTCCGCGAGCGTGCTGGGCAACACCCAGATCATATTGCTGTGCGAGAAGGTGGCCAAGGAGGATATCACGGTGCGCTTCTTTGAGGAGAAGAACGGACAAACGGTGTGGGAGGCCTTGGGCGATTTTCAGCACACGGACGTGCACAAGCAGACTGCCATTACGTTTAAGACTCCGCGCTATCACACACTGGAGATAACGGAGCCCGCCAAGGTTTTTATCCAGCTGCGTCGACCCTCGGACGGCGTTACCAGCGAGGCTCTGCCCTTCGAATATGTGCCATTGGATTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCATCTCAAGCGGAAGCCCGATGAAGACATCTTTCAGCAAATTCTGTCGGTCGATACGGGCGCCGCCAAGCGCGAGCCGCCCACGATTGAGGTAATTGATCTAAATACGCCCACCTTGGagcagccggagccggagctgcGACTGTTTGACGGGACGACGGAGGCGGTGGATGTCATAGATCAAGCGCCGCAGGACATGGAAGCAGCGGATGCAGAAGCGGAAGCGGAGCGTTTGCGCACGGAACTGGAAATCGATACGATTATCGATGAAAAGGTGCGCGAATTGGagcaactggaactggagcagCAGATGGCGGCGCCAGAGCCGCACCAGCTGACGGCCAACGACAAAATCAACGAATGGATGAAGTCCAACGAGCTGCCGGAACAGCCCCACGAGCCAAGCCCAAGTCCGGCTGAAGTCGAGGCCGACGACAGCGATGCGACCGAGGCAACGGTTGAGACGCAGGTGGCCACCACGGAGGAGGATAAGACGCTAAACGAGCTGCTCGAGCAGGTGGCCGAGCTAGATGAGATCTACACGGACTTTGTGATGCAGCGCGACACCTACAACAACACGCTACAGAACGAGCTGCAGAGCATGGACCGGCCGCCCATGCAGGTGGACGACAGCTTCGACGATGCCGCCACCTACACAAGTCTGCAGATCGCCTACAAGCATCCAGTCGATATACCCATGGAGGATATAATGCCACCAACGCCGCCCATGTCGCAGTGTGCGCCAGAAGATGCGCAGCATTACGATGCAGTGGAGGTCAACTCGCAGCAGGAGAGGAttcaggagcagcaggagcgtACTCAGGAGCGGGAGCAGCTAGAACTGGCGGCTGCCCAGCTACTTGCCGCCACCGAGGAGGAGaagttgccgccgctgccgcccaaGCGTTTGCGCAAGCAGGACAGCAATGCCGAGAATCGCTCCATAGAGGCTAACAACGGGGATGCGGCGCCTCCAGCCGTGCGCGAGAAGGCACGTGGCCTGCCGCCGCCCATAATCCATCCGCGTGTATCCGATCTGCCGGCCGCGCCCACAAAACGCTTGCCACAGCCGCCGGAGACCAAGTCCAAAAGCAAATCCACAACGAATCCCAACTTCAATACGCTGCCGCGGCAGAAGAAGCCCGGCTTCTTCTCGAAGCTGTTCTCGCGCCGCAAGAGTAAACCGGAGCTAATGCAGCAGAGCAGCGAGAATTGTTCCAAGGCAACCAGCGCAGCGGCCAGTCGGGAGCCCAGCCTGGATAATCTCAATATGCGCGATCCGCTGCGCGCCTCGCAACGCTCCTCCAAATCGAATCAAGCGGCCAGCTCGGGTCCGTTGAAGTCGGGCGGAGCGGGTGCGGCACGAAAGATCGGCAAGGCTGggaagccctgcggacgcAGCGTGAGCAGCGTGTCGGGCAAGCGACCCTCTTACCTAAATGCGGACGTGGTGCACATACCTCTAAAGGGCGACAGCGCCAGCAGCCTGCAGCAGGCGCCACACGAGGCCTACTCGAATGCCAGCACGATTACGGTGGGCGGCCAGTTGGATAGACGCACTGCATCCGCATTGCAGCTGGCCGAGATACCCATCAGCGAGGGCGGCATGGAGCTGGTGGCCATTGCCGATCGCCAGAGCCTGCACAATTTGGTCAGCTCCATTGAGGCGCACTTTAACGTGAAAATGGATCCCAATCTCGATCTCACCGAGGTCGAGCACTTTGCGCTCTATACAAGTGTGCCGCCCCAGGCGACGGCCAGCGAATTCGACGAGACATCCGCCTACTATGCCCAGGTGGATGCCGGCGAGATTCTAACACCTGACCAGGTGGCCAAACGCTTGGCGGCGGCAAAtggcaattaa
Protein Sequence
MFPNQNNLAAAGAAGDPQQQNLNYNGLQQQQQQQQQQQQQQQQQQQTQQLSQSTKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDITVRFFEEKNGQTVWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILSVDTGAAKREPPTIEVIDLNTPTLEQPEPELRLFDGTTEAVDVIDQAPQDMEAADAEAEAERLRTELEIDTIIDEKVRELEQLELEQQMAAPEPHQLTANDKINEWMKSNELPEQPHEPSPSPAEVEADDSDATEATVETQVATTEEDKTLNELLEQVAELDEIYTDFVMQRDTYNNTLQNELQSMDRPPMQVDDSFDDAATYTSLQIAYKHPVDIPMEDIMPPTPPMSQCAPEDAQHYDAVEVNSQQERIQEQQERTQEREQLELAAAQLLAATEEEKLPPLPPKRLRKQDSNAENRSIEANNGDAAPPAVREKARGLPPPIIHPRVSDLPAAPTKRLPQPPETKSKSKSTTNPNFNTLPRQKKPGFFSKLFSRRKSKPELMQQSSENCSKATSAAASREPSLDNLNMRDPLRASQRSSKSNQAASSGPLKSGGAGAARKIGKAGKPCGRSVSSVSGKRPSYLNADVVHIPLKGDSASSLQQAPHEAYSNASTITVGGQLDRRTASALQLAEIPISEGGMELVAIADRQSLHNLVSSIEAHFNVKMDPNLDLTEVEHFALYTSVPPQATASEFDETSAYYAQVDAGEILTPDQVAKRLAAANGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530040;
90% Identity
iTF_00474987; iTF_00526348; iTF_00534353; iTF_00490552; iTF_00505881;
80% Identity
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