Basic Information

Insect: Drosophila niveifrons
Gene Symbol: stc
Assembly: GCA_035046325.1
Location: JAWNOC010000006.1:997315-1000687[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.31 2.6e+03 -1.5 0.2 9 14 36 41 34 41 0.80

2 17 1.4 1.2e+04 -3.6 0.5 15 18 352 355 351 356 0.79

3 17 2 1.7e+04 -4.1 1.6 15 19 379 383 378 383 0.81

4 17 0.061 5.2e+02 0.7 2.2 4 11 412 419 411 422 0.91

5 17 4e-07 0.0034 17.3 15.0 3 19 425 441 424 441 0.94

6 17 1.4 1.2e+04 -3.6 1.1 6 10 467 471 466 471 0.89

7 17 5.9e-08 0.0005 20.0 10.9 1 18 477 494 477 495 0.97

8 17 2 1.7e+04 -6.2 4.1 7 13 499 505 499 506 0.77

9 17 2e-09 1.7e-05 24.7 12.9 1 19 535 553 535 553 0.98

10 17 0.55 4.7e+03 -2.3 0.6 5 10 583 588 583 588 0.95

11 17 2.9e-05 0.25 11.3 17.5 4 19 601 616 594 616 0.88

12 17 0.061 5.2e+02 0.7 11.7 1 11 656 666 656 678 0.79

13 17 2.8e-10 2.4e-06 27.4 15.1 1 18 683 700 683 701 0.97

14 17 2 1.7e+04 -4.4 1.2 6 10 730 734 730 734 0.88

15 17 2 1.7e+04 -8.0 9.6 10 18 748 757 737 758 0.74

16 17 3.3e-05 0.28 11.2 11.3 1 16 794 809 794 815 0.92

17 17 6.4e-07 0.0054 16.7 15.3 1 19 826 845 826 845 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.31	2.6e+03	-1.5	0.2	9	14	36	41	34	41	0.80
2	17	1.4	1.2e+04	-3.6	0.5	15	18	352	355	351	356	0.79
3	17	2	1.7e+04	-4.1	1.6	15	19	379	383	378	383	0.81
4	17	0.061	5.2e+02	0.7	2.2	4	11	412	419	411	422	0.91
5	17	4e-07	0.0034	17.3	15.0	3	19	425	441	424	441	0.94
6	17	1.4	1.2e+04	-3.6	1.1	6	10	467	471	466	471	0.89
7	17	5.9e-08	0.0005	20.0	10.9	1	18	477	494	477	495	0.97
8	17	2	1.7e+04	-6.2	4.1	7	13	499	505	499	506	0.77
9	17	2e-09	1.7e-05	24.7	12.9	1	19	535	553	535	553	0.98
10	17	0.55	4.7e+03	-2.3	0.6	5	10	583	588	583	588	0.95
11	17	2.9e-05	0.25	11.3	17.5	4	19	601	616	594	616	0.88
12	17	0.061	5.2e+02	0.7	11.7	1	11	656	666	656	678	0.79
13	17	2.8e-10	2.4e-06	27.4	15.1	1	18	683	700	683	701	0.97
14	17	2	1.7e+04	-4.4	1.2	6	10	730	734	730	734	0.88
15	17	2	1.7e+04	-8.0	9.6	10	18	748	757	737	758	0.74
16	17	3.3e-05	0.28	11.2	11.3	1	16	794	809	794	815	0.92
17	17	6.4e-07	0.0054	16.7	15.3	1	19	826	845	826	845	0.96

Sequence Information

Coding Sequence: ATGGACCAGTattggcaacgacaacaacagccacagttACAGCCAGAACAGTTTGTTGCAAACGAATCAGGTGGCGATTTGTTAGCTCCAGATGAGTCAGCTTCTGCATGCCACGGTGGAAACAATAACTATGTGAATTTCAATCAATTCATCACGCAACATAATCTGGCCACTTCCAACCTAAGTTATAGCAATGGAGCCGGAGGTGCAGCCTTTGGACTGACCCCGAATAATAGCAACTATGGTGGATTTTCATATGCACAACCCTCTTTCGAGTATCAAAACAGCGATGGAGCAGCCAGTGGCAGCGGTGGAGTTTCTTCTACCAACAATTATCAAGAACCGTTAAGACACGCGTTGGATATTAATCCTTTTGCCTCAGCCAGCAGTTTTGATTTCAGCACTTCCAAGCTTCAGGCATCGGCTCCAGAATTTGTGCCAACTTTTGCAAAGCTAAATTTAAGTGCTTCCCCAGCACCTGCGACGTCAACGGGGTTGGGAGAACAGTCTCCTagatcgagcagcagcagccataataacaaccacaataaatacaatattaatggCAATAGCAGCACTGCCATAGCAAGTAGTGAAACAACTAaccatcatcaccatcaacagcagcagcagcgtagTCAACAAGCCCAACTGCCAAAAGCATATGGTTCCAACAGTCGCCAACAGCGACGCAACGATTTCCGCGAGGATCGCATCGATCGTAATGAGGATCGCTATGATCGCAAGAAGCCGCAGAAGCAACAGCGCTATGACAATCATAGAAGCAACAAACGACGCGACGACTGGAACCGTAATCGAGATCGTATCAATGGATATGCACGTGCCAGCGAAGAGTTTGACACAAGCAATAGCAATGACAGCGCCCATCCATCACcggaaaagcaaaagcagcatcAAATATCGCCAAGACGCGCCGGCCAGGACAACGAAAAGTTGTCGCAACGCGAGAAACTAATGCGAGATATCGAGCAACGCCGTCTCGAGTGTCTGGTGTGTGTGGAACAAATAAAGCCGCATCATGGCACATGGTCCTGCCAGAATTGTTACCACGTGCTCCATCTCAAGTGTACAATTACTTGGGCCAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCTTGTCAGAACGTGCTGCAGGAACTGCCGCGCGAGTACTTGTGCTTCTGTGGCAAGCTCAAAAATCCGCCCTTGACGCGTACTGAGTTAGCTCACAGCTGTGGGGAACTTTGCTGCCGTACTGAGGGCTGCAACCATGCGTGCACTTTGCTATGCCATCCGGGGCCATGTCCGCCATGCCAGGCGAATGTGAGTCGCAGTTGTGGCTGCGGACGAACCAGCAAACTGATGCAGTGTTCTATGAAGCAGCCGCTGCAGTGCGAATCGATTTGCGACAAACTACTCAACTGCAGCGAACATCGATGTCAGCAACTTTGCCATGCGGGAAAATGCGAGAATTGTGCGGAAAAGGTGCAGCAGCATTGTCACTGCGGAAAGCAGCAGCGTGGCGTGATGTGCACTAAGGAGAGCCAGGACAAGCGTAGCTATTCGTGTAAGGAATGCTGCGGGAAACCGCTGCCCTGTGGCAATCACAAATGTAAGGACTCATGCCATGCTGGCGCCTGCCGTCCTTGTAAGCTTAGTCCCATTCAGATTACTACTTGCCCTTGCGGCAAGCTGCCAGTTGCCGTTGAGCAACGCGCCAGTTGTCTTGATCCTGTGCCCACCTGCGATAGCGTGTGTGGCAAGACATTACGCTGTGGCAAGCCTGCCCATCCTCATCAGTGCACGAGTAAATGTCACTTGGGACAGTGTCCGCCGTGTCCCAAACAGACGGCCGTTAAATGCCGCTGTGGACACATGGATCAAATGATTAAATGTCGGCAGCTGTCGACGCGAGCAGACGATGCGCGTTGCAAGCGACGTTGCACCAAGAAGCGCAGTTGCGGCAAGCACAAATGTAACGCCGAGTGCTGCATTGATCTTGATCACGCCTGCCCTTTGCCTTGCAATCGTACATTGAGCTGTGGACGCCACAAGTGTGACCAGCCATGCCATCGCGGTAACTGTCCCCCTTGCTATCGCAGTAGTTTTGAGGAGCTCTATTGCGAGTGTGGTGCAGAAGTCATCTACCCACCAGTGCCTTGTGGCACCAAGAAACCCATATGCAAGCGACCTTGTTCTCGCACTCATGGATGCGAGCACGTACCTCAACACAATTGCCATGCGGCGGCTATTTGTCCGCCCTGCATGATGTTCACGACGAAATGGTGTCACGGCAATCATGAGCAACGCAAGACCATACCTTGCTCGCAGCCCAGTTTTAGTTGTGGTCTAGCTTGTGGTAAGCCGCTTGCCTGCGGACGGCACAAATGTATAAGACCATGTCACGAGGACGGTTGTCAGCAAGCTGGTGAATTGTGCCGCCAAAACTGTACCAAGCCACGTGTGATTTGTGGACACAAATGTGCTGCGCCGTGCCATGAAGGTAGTTGCCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGTGAGTGCGGCAATCGGAAGCAGAACCGCAGTTGTCAAGAGTTGGCTAGAGAGCACAGTCGGATAGCTACAGCCCAGTTGGCTTCTTCAATGGCTGAAATGTCTCGTGGCAACTACATGGAACTTAGCGAGATTTTAGCTCCAGGGAAAGcaagcaaatcaaacaaaacATTGGACTGCAATGAGGAGTGCCGCCTATTAGAGCGCAATCGTCGGTTGGCTATCGGTTTGCAGTCACGCAACCCGGATACACAGTTGAAGTCACTCACCAAGTACTCGGAATTCACTCGTGGATTCGCCAAACGCAATCCAGCTTTGACCAAGAGCGTTTATGAAACGTTAAGCGATTTAGTAAAGTTAGCCAAGGAAAGCAAGCAGAAATCGAGAAGCCACTCATTTCCCACCATGAACCGCGAGAAGCGACAACTGGTGCACGAGCTATGTGAGGTGTTTGGCATTGAGTCTGTGTCTTATGACAAGGAGCCCAATCGCAATGTGGTTGCCACGGCGAACAAGGAGCGTtGTTGGTTACCCGCCACTAGTATAATGGAGGTCTTGGCACGTGAGTCAGGCCAACGCCGTGTTCCGGTGCCTAGTAATAACGCCTGGGGCCTCAAAAAGTAG
Protein Sequence: MDQYWQRQQQPQLQPEQFVANESGGDLLAPDESASACHGGNNNYVNFNQFITQHNLATSNLSYSNGAGGAAFGLTPNNSNYGGFSYAQPSFEYQNSDGAASGSGGVSSTNNYQEPLRHALDINPFASASSFDFSTSKLQASAPEFVPTFAKLNLSASPAPATSTGLGEQSPRSSSSSHNNNHNKYNINGNSSTAIASSETTNHHHHQQQQQRSQQAQLPKAYGSNSRQQRRNDFREDRIDRNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYARASEEFDTSNSNDSAHPSPEKQKQHQISPRRAGQDNEKLSQREKLMRDIEQRRLECLVCVEQIKPHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRTEGCNHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCSMKQPLQCESICDKLLNCSEHRCQQLCHAGKCENCAEKVQQHCHCGKQQRGVMCTKESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPIQITTCPCGKLPVAVEQRASCLDPVPTCDSVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDLDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHVPQHNCHAAAICPPCMMFTTKWCHGNHEQRKTIPCSQPSFSCGLACGKPLACGRHKCIRPCHEDGCQQAGELCRQNCTKPRVICGHKCAAPCHEGSCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPGKASKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATANKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00554082;
80% Identity: -