Basic Information

Insect: Drosophila niveifrons
Gene Symbol: -
Assembly: GCA_035046325.1
Location: JAWNOC010000039.1:618154-621323[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.9e-06 0.00019 21.6 1.5 2 23 168 190 168 190 0.97

2 17 0.0015 0.095 13.1 3.3 1 23 234 257 234 257 0.96

3 17 0.00063 0.041 14.3 3.3 1 23 323 346 323 346 0.96

4 17 0.0047 0.31 11.5 0.5 2 23 397 418 396 418 0.97

5 17 9.8 6.4e+02 1.1 3.1 1 23 498 524 498 524 0.91

6 17 3.9 2.6e+02 2.3 0.6 1 20 531 550 531 552 0.75

7 17 0.02 1.3 9.6 0.6 1 23 561 583 561 583 0.94

8 17 0.00025 0.016 15.5 0.6 1 23 590 613 590 613 0.96

9 17 0.00035 0.023 15.1 1.4 2 23 621 642 620 642 0.96

10 17 0.0026 0.17 12.3 0.1 3 22 670 689 668 692 0.89

11 17 0.0025 0.16 12.4 1.0 1 23 734 757 734 757 0.96

12 17 1.6 1.1e+02 3.5 3.4 1 22 764 785 764 785 0.96

13 17 0.0069 0.45 11.0 1.6 1 23 794 817 794 817 0.97

14 17 1.6e-05 0.001 19.3 0.5 1 23 836 859 836 859 0.97

15 17 0.74 48 4.6 0.1 1 23 869 891 869 891 0.91

16 17 0.00035 0.022 15.1 3.2 1 23 897 919 897 919 0.98

17 17 5.2e-05 0.0033 17.7 0.9 1 23 925 947 925 947 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.9e-06	0.00019	21.6	1.5	2	23	168	190	168	190	0.97
2	17	0.0015	0.095	13.1	3.3	1	23	234	257	234	257	0.96
3	17	0.00063	0.041	14.3	3.3	1	23	323	346	323	346	0.96
4	17	0.0047	0.31	11.5	0.5	2	23	397	418	396	418	0.97
5	17	9.8	6.4e+02	1.1	3.1	1	23	498	524	498	524	0.91
6	17	3.9	2.6e+02	2.3	0.6	1	20	531	550	531	552	0.75
7	17	0.02	1.3	9.6	0.6	1	23	561	583	561	583	0.94
8	17	0.00025	0.016	15.5	0.6	1	23	590	613	590	613	0.96
9	17	0.00035	0.023	15.1	1.4	2	23	621	642	620	642	0.96
10	17	0.0026	0.17	12.3	0.1	3	22	670	689	668	692	0.89
11	17	0.0025	0.16	12.4	1.0	1	23	734	757	734	757	0.96
12	17	1.6	1.1e+02	3.5	3.4	1	22	764	785	764	785	0.96
13	17	0.0069	0.45	11.0	1.6	1	23	794	817	794	817	0.97
14	17	1.6e-05	0.001	19.3	0.5	1	23	836	859	836	859	0.97
15	17	0.74	48	4.6	0.1	1	23	869	891	869	891	0.91
16	17	0.00035	0.022	15.1	3.2	1	23	897	919	897	919	0.98
17	17	5.2e-05	0.0033	17.7	0.9	1	23	925	947	925	947	0.98

Sequence Information

Coding Sequence: ATGACGAGAACATGCCGAATCTGCGGCGGGGCAAATGGACGCTATTGGATTGAGACGCCAGTGAATAAGTACGCTGACAAAACATTCAATCAACTGTTATTGGAATTAGCAAGACTCGAGGTCGCCTTGGATCATGTTGACAAGCTTCCGCCCTGGCTGTGTCGCGTCTGTGCACAAAAGCTGGAAAATGCCTATGACTTCGTACTACAAGCACGTGAATCCCACGAACATTGGATACAGAAACTCTCAACCGATGACACGGAGAAGGGAACTTTCGAGTGCCTGCGAGAGACTCCAATACAATTGCTGGACATTGAAGGCGTGATAATTAAAATGGAAGAACCCGCCGAACCTGCGAGCACGCCTCAATCAGAACCCAACATTTCTGTTGACCCGCTAATTAAGAAGAGTATTGTGGATGATGAAAGCGAAGATGATGAAGACGACGATGTGCCATTGAAACAGCGTAAGGTGAATCAAACAAAGTTGCCCATAAACCGAAAATGCAATATCTGCGGCAAAGCCTTCAAGTACGCGACAAATCTCTTTAAACATAAACAGCGAGACCACCAGGACAAGTTAATAACGAAATCGAAAGAAGAAAATCGTTCAGAGCCTTTCCTACAAAATGTATCAAAAAGATCTGCGGCATCTCGAAGTAGCGCCAACTCCGACTTAGACAATGACGATGATAACTACTATAAATGCGATCAGTGCGATAAATCCTACAAGTACATTATGCTGCTCAttaagcacaagcacaaggtGCATGGCGTTAACCAGTTACCATCGGTGCCTATGCCAATTTCAGGAGCCAAATCCAGCTCAGAGGAattaaccaaaacaaaaccaacacaaCGAAAGCGTTTGAAACCTCCGAGCACAGATTCCTTGGTGCACAGCCTAATTAAGGAGGTTAAAACACCTGAAGAGGAAGACCTAGAAGGTACCAGCTCAgataattattacaaatgcGATCAATGCGACAAATCCTACAAATACATTGTGAGTCTCatcaagcacaagcacaaggaGCATAGTGAATACAAAGAttccgatgatgatgaggacgaAGCATCACTATCCAAATATCCAACGGCAGCCGCTAACTCGAAACCCACACGCATTGATCGTCGGGTGAAAGGCTTCGACCTGCATCGCTGTAAACCGAATGGAATCAAAGAGATTCAGTGCATGATCTGTTTGCGAAGATTTGGTAAACTGAGAGAGCTGCGTAATCACCTTAGAGCACATCCCAAAGATATTACATTCGAGGCCCACGGGGAACCCATTGAACGCATTGCTGAGGGCTTCTATCGCACAGCTGTGGAGTCAACTGCAGATGGTTTGAAGACGCGTATCCTTAATGATCTCAAGGTTGGCATGTATGGCCGATACTATTCCATCACCAATGAGGCGCGTTATGAGATGAATCTGGACAGCTCAGACACCGACAGCGATGGCGAATGTGGAGTTGTTGAACGACGTAGTTACGCCTGCGAACTGTGTGATTCCCATGCTGCCATTTACCCGCGCAAGTTTCAGCTACATGAACATCATCGACAGCAACACACTTGGCTAGAGGCGCCATACATCTGTTCACGTTGTGATTCGCGTTTCCTCAGCGCCCAACTGCTCGATCATCATACGAATAAGCTATGCCAGAATACCCTCAAGCGTTTCATGTGCGACAAGTGCCCACAACGCTTCTTCTGGCGTCGCAATTTGCGTGCTCATCTCGTCGAGCACAAAAATAAGCAAGAAGTTTACCCCTGTGATCAGTGTTCACGCAGTTTTCAGGATAAAAGCGCGGTGACAAAGCATAAGCTGATGCTTCACGATGGCAGCCACGAACTGATTCCTTGTCGTTGGTGCACTCGCACTTTTTATCGTCCGGCTTTGCTGCATAAACATGTTAAGCGCCATGGCTTCACCGGAGAGGATTTACCCTTGGCGGAGACATTGCTGGCCTATGCCGCAAAGTCATCCGGACCCAAGTCGATCATTTGCAAACTTTGTGATATGCAGTTCATTAGCATAGCTGATTTGCGGCGACACATTTCCATGCAGGGGCACAGCGAAGATCCATCCAACTATATGATAAGCACAGAAGAAGGTTTTGAGTTGCATCTGGATGAGACGGACGACAGCGATGATGAGACTACTACTACTAACGCCGTCCCTTCTGCTGGCAGAACCTACAAGTGTGATCTTTGCGATGCGACGTTCCAGCGGCGTCGCGATATGAGCGAACATCAGTATTCCTTGCATAACTTTGATAAACTACCCCATTCCTGTGAACATTGTATTTACAAGACGGTCGACAAGtaCATGATGCAACATCATTTGCGAACGCAGTGCCTCAACGAGCAgaagaaattcaaatgttCCCGCTGTGGCTTTAAATTCATGTGGAAGGAAAATCTGGATCAGCATATGAACAGCCAGCATACACATTTCTCAACTCAAGCCCCAGTTCAAAACAAGCGAAGTCGCCGCTTTAGATACCAGTGTCCACATTGCTGGCGATCTTTTGTTGTACAACCGAGCCTGGATAAACACATACGCGACATGCACGTGGCCAAAAAGAATCCTGGCAAAAAGTATCTCTGCTCATTGTGCGGCCTGGAGGCGCTTACGCCCAACAAGCTGGCAATCCACATGCAGCGCCACAATGGCGAAAAACCACACAAATGCGATCTGTGCGAGATGTCCTTTACCGTATTTTACGAGCTAAAAGTTCATCGTCGAAAGCATACGGGTGAGCGTCCCTATCAATGTACATTTTGTGCCAAGGATTTCGCACGCCCCGATAAGCTTAGACGACATGTTTACATGCACAGTGTAAGGCGTTAG
Protein Sequence: MTRTCRICGGANGRYWIETPVNKYADKTFNQLLLELARLEVALDHVDKLPPWLCRVCAQKLENAYDFVLQARESHEHWIQKLSTDDTEKGTFECLRETPIQLLDIEGVIIKMEEPAEPASTPQSEPNISVDPLIKKSIVDDESEDDEDDDVPLKQRKVNQTKLPINRKCNICGKAFKYATNLFKHKQRDHQDKLITKSKEENRSEPFLQNVSKRSAASRSSANSDLDNDDDNYYKCDQCDKSYKYIMLLIKHKHKVHGVNQLPSVPMPISGAKSSSEELTKTKPTQRKRLKPPSTDSLVHSLIKEVKTPEEEDLEGTSSDNYYKCDQCDKSYKYIVSLIKHKHKEHSEYKDSDDDEDEASLSKYPTAAANSKPTRIDRRVKGFDLHRCKPNGIKEIQCMICLRRFGKLRELRNHLRAHPKDITFEAHGEPIERIAEGFYRTAVESTADGLKTRILNDLKVGMYGRYYSITNEARYEMNLDSSDTDSDGECGVVERRSYACELCDSHAAIYPRKFQLHEHHRQQHTWLEAPYICSRCDSRFLSAQLLDHHTNKLCQNTLKRFMCDKCPQRFFWRRNLRAHLVEHKNKQEVYPCDQCSRSFQDKSAVTKHKLMLHDGSHELIPCRWCTRTFYRPALLHKHVKRHGFTGEDLPLAETLLAYAAKSSGPKSIICKLCDMQFISIADLRRHISMQGHSEDPSNYMISTEEGFELHLDETDDSDDETTTTNAVPSAGRTYKCDLCDATFQRRRDMSEHQYSLHNFDKLPHSCEHCIYKTVDKYMMQHHLRTQCLNEQKKFKCSRCGFKFMWKENLDQHMNSQHTHFSTQAPVQNKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLEALTPNKLAIHMQRHNGEKPHKCDLCEMSFTVFYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00579434;
90% Identity: iTF_00553855; iTF_00556658;
80% Identity: -