Basic Information

Insect: Drosophila nikananu
Gene Symbol: lov
Assembly: GCA_008042635.1
Location: VNJV01006149.1:49373-57912[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.2e-19 2.5e-15 56.3 0.0 1 44 796 839 796 840 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.2e-19	2.5e-15	56.3	0.0	1	44	796	839	796	840	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGACCAGGAGCTGATTAAACGCCGCCCACTGACGTCGCTCCCCATGACCGACTTCGCCCGTCAGGTGGCGCCTGCACAGCTGCCCCTGTCCCTGCCGCTCCAACTGCCGCTGCCTATGCCTATGCCGCGGCCACTCCTGGCCAAGACTCCTGGCAGCGACCACGCTCCCATGCACTCCACGCCACCCACAACACCGCCCACGCCGCCTCCCCTGCCTCTGAACATGAGTCAGACGGCAGCGGTAGCAGCGCCAGAAGCAGTGACTCCACCTGGTCACAGTCCACCAGCCACACCGCCCACCGGAGGAGCAACTGGCAGCAACGCGGCGCCGCAAGATCACTACAGTCTGCGCTGGAACAACCACCAAAACCACATCCTGCGAGCCTTCGACGCCCTGCTGCAGACCAAGACGCTGGTGGACGTGACTCTGGTCTGCGCCGAAACATCGATCCGTGCTCACAAAATGGTTCTCTCCGCCTGCTCGCCCTTCTTCCAGCGCGTCTTTGCGGAGACCCCTTGCAAGCACCCCGTGATCGTTCTCAAAGACTTCCGCGGCTGGGTGGTGCAGGCTATCGTGGACTTCATGTACCGCGGCGAGATCAGCGTCCCACAGCAGCGTCTCCAGACCCTTATTCAGGCCGGCGAGTCGCTGCAGGTGCGGGGTCTTGTGGAGAGCTCAGTGCCGGAGCACACGCCCACTCCGGCAGCCTCGCCCGACGACTTCGCCATGCTGGACACCTCCATGCTATCCTCCAGCTTCGAGGACGAGTCGCCTTCGATGGTCCGCCCATCGGCAGCGGGCAAGCTGATGATGTCCTCGGCCCGTCTCTTCGGCAGCGCGACAAACACCATGGCAGCGCTCAGTCTACGACGCAAGCGGGAACAGGAGTGCGACCGTGAGCTGGAGAGCGACCAGGAACTAGGAGGCAGTTCGCCGATGCCACGTCGCAAGCAAGCCCGCCCACGCCGTCGCTCTGGCGATGTTCCCCACGACTTTGCCCTGAACAAGACCGAGGCGGAGCCACTGCAAACTGTGATCAAGCACGAGCTCCTCGACCGAGCGGAAAGGGATCACGACGAGGAAAACGATCAGGaacaggatcaggatcagaaTCAGATCCACAGTGAGGCGGAAAAGAATGGAGCTACGTCAACGGAAACGTCGGCAAATCAGGCCAAGGAGAAGCACCTGCTGCAGCCCGAGGGACCAAATCGGCCCCACGAGCTagacgatgacgatgaagaTGAACAGGAGcaagaggaagaggaggaggagcaggacaTTGAGGAGCTTATTCACACGACCAACGAGCTGAGGCGACAGGCTGCAGTGGCTGCCGCAAATGCAGCTGCTATGTCGCCCAGCCCCTCGCCCTGTCCCAGCGACGGACCCGAGGACCTTTGCACCACCAAGAAGGACAAGGATAGAAACAGTGCGAAAACCAGTGGTGCCCCTACCTCCGACTgtgagtccaacaacaacaacagcagcaaactGCAGGACAACAACCAGCGCATCATGCTGTCCCTGAAGGACATCCGCCAACTGAACGCCAATCCCAACCCAACGGCCATCCACACGCCCACCAGCTGCTCCGGCGGAAACAGCGGCCTGCTTAGCTTTCCACCGCCCGGTATGCGGCCACCGGGGCTGCCGGACAGCCCGCCCTGCCACATGGAAGCCCTGGAAGCGCAGATGcacgctgctgccgctgcagccgtAGCCGCTGCAGGAGCTGGCGAACATCCCTTTCACCACATGGAGCACCAGATGGAGATGTCCctagcagcagcggcggcagcagctgccatGCACCAGAGAGACCCCCGAGATCCGCGCGATCCACGAGACCACAACGCATTTGCTAGCAACCTGCTGGGCCCAATGGGGATGCCCCCGTTCGGGGGACCCAACGGAGGACCTCCGGGAAGCAGTGGTCCAGGAAGCGGATGTCCTGGCCAGGCGGCGCACGAACGGCTCGAGGAGAGCATGAATCGACTGAGCAAAGAGCTCGGCAAGGAATTTGGAAAGGACTTCGGCAAGGAGTTTGGCAAGGAATTCGCCCCGGCGTCCCCGATGAGTCTGCCCGGACACTTCAATCCGCCGGATGGCCCACAGCATCCGCCTTCGCCTCTGCCTTTCCCCGGCATGTCCTCGGCGATGACGCTGACGCCACCGCACATGTTTGGCCTGGACTCGCCACTGGGACTGTTTCCGCCCGGAATCGATCCCGGAAAACTGTACAACCCCCTAATGGAAATGAGTGATCCGAGGGACATGCCAGGTGGACCGCCGCCGTTTctcaaaaagaaaaTGCCACGACCAAAGGGCCAGCACTCGGCGCCTCGCGGTGGGCCACCTCGCTCCTGGACCAACACTGAGCTTACGGAGGCACTACAGCATGTATGGAACAAGAAGATGACCACTTCGCAGGCCTCACGCATCTTCGGCATCCCGTACAACTCCTTGCTCATGTACGTGCGGGGCAAGTACGGAAAGAGCCTgaagctggagcagctgcgcAAGGACTGCATCAGCGGACCCCCCATCGAGATGCTTCAGATGGGCATCAGCGGAGGCAGCGGGGGCGGTGGCAGCAGTTCCAGCAAGAGCGAGAAGAGCAAGGAACGCAAAgagaaggacaaggacaagggtTCGACGGGCAACAACAGTTCCGGAGGACCCTCGAATGCCCCTGGCGGCGGAGGTCAGTCATCTGGAAACGGTCCCTCTATGCCGCATCCCAGTGAAATGGGCTCCCTGGGACCGCTGGACCTGGAGCTGGGACTACCACTGGGCCCGCCAGGAGGCCCGCGGAGCAACAGCTCAGAGCCCGATCTACTGAGCGGACCGAATGCTCTCTTCAATCCCTTCAACCCGCAGGGCTTCTACCCGGACTTCGCGGGCGGTTTTCCCGGCCTCCCACTGAGCATGTTAAACCTGTTGCCGCCGTCGGAGCGCCACCATGCTGCGGCTGCTATGCATCACCTGGGCGTCACCATGGACGAGGACTGCAAGTCGGTGGGATCGAAGCAGTCCTCCTCCCTGGACGACGACTACTCTGGACCCGGGATGTCACTGTCGCTGGAACAGCGGCGAGAGATGAGCGCGACAGGACCTCCACTGACACAGTCGAACGGGGGAGGAGGGCAGGATTGA
Protein Sequence: MLKDADQELIKRRPLTSLPMTDFARQVAPAQLPLSLPLQLPLPMPMPRPLLAKTPGSDHAPMHSTPPTTPPTPPPLPLNMSQTAAVAAPEAVTPPGHSPPATPPTGGATGSNAAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFAMLDTSMLSSSFEDESPSMVRPSAAGKLMMSSARLFGSATNTMAALSLRRKREQECDRELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKTEAEPLQTVIKHELLDRAERDHDEENDQEQDQDQNQIHSEAEKNGATSTETSANQAKEKHLLQPEGPNRPHELDDDDEDEQEQEEEEEEQDIEELIHTTNELRRQAAVAAANAAAMSPSPSPCPSDGPEDLCTTKKDKDRNSAKTSGAPTSDCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNSGLLSFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQRDPRDPRDPRDHNAFASNLLGPMGMPPFGGPNGGPPGSSGPGSGCPGQAAHERLEESMNRLSKELGKEFGKDFGKEFGKEFAPASPMSLPGHFNPPDGPQHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGSGGGGSSSSKSEKSKERKEKDKDKGSTGNNSSGGPSNAPGGGGQSSGNGPSMPHPSEMGSLGPLDLELGLPLGPPGGPRSNSSEPDLLSGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPSERHHAAAAMHHLGVTMDEDCKSVGSKQSSSLDDDYSGPGMSLSLEQRREMSATGPPLTQSNGGGGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00569614;
80% Identity: iTF_00561846;