Dnig014403.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- dmrta2_2
- Assembly
- GCA_004149445.1
- Location
- SCDR01000108.1:135639-136592[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-25 3.4e-21 75.4 8.9 1 47 4 50 4 50 0.99 2 2 0.41 2.2e+03 -0.8 0.4 31 41 98 108 95 120 0.57
Sequence Information
- Coding Sequence
- ATGTCTCAACGCAGCCCCAAATGTGCGCGCTGTCGCAATCATGGCCTGATCAGCGCTGTGAAGGGTCACAAGCGCTTTTGTCGCTGGCGGAGCTGTGTCTGCGATAAGTGCATTATCGGCGTGACGCGCCAGCGGGTGATGGCCGCACAGATCGCATTGCATCGCCAGCAGTCGTTTGAGAAAGCCGCAAGGCGTCGCCaggatattatattatttggcTCTGCCTCAAGTTCGGATACGCAGAACTCACAAAGCATAAGCAACTCTGCAAAGATTCCAGATTTTTATAGGTGCACGAGCTGCACAATTAGCCACtttcaacaacagcagcaacaacaacgacaccaGTTTTCATGGAAGTCTAATAAATCCGTTGTCCCACGCATCCTTACGCCCAGCGCTCCAAAATCCGACATTGATGTGGATTCTGCGCCCCACGAAACCACGCCGGAGAATCTCAACCTCAAAAAGGAAGACAGCAACTCGCCCCCGAACACATTCGCCGAGAATCTCAATCTGCTGCGCTCCTTTTACACCGAATATGCCCAGAGCCTTTCGTTCTACCAGCACACGCCATCCTTGGGCGCTGCGGGGCTGCAGGCTCAGCGCCAGGAGCAACATTCTCCAGTGGATGCCCTGATGCGCGTCTTTCCCAATCACCGGCGCAGCGATGTGGAGCAGCTGATGCAGCGCTTCCGAGGTGATGTGTTCCGAATCATAGACTGCTTGTTGGCTGGCAAGGATTTGCCGCAGATGCCGCCCATGCCCGTGCAGACCTACTTCCCGTTGCTGAAGGCGCAGGCCCATCGCTCCCTTGCCGAAACATAA
- Protein Sequence
- MSQRSPKCARCRNHGLISAVKGHKRFCRWRSCVCDKCIIGVTRQRVMAAQIALHRQQSFEKAARRRQDIILFGSASSSDTQNSQSISNSAKIPDFYRCTSCTISHFQQQQQQQRHQFSWKSNKSVVPRILTPSAPKSDIDVDSAPHETTPENLNLKKEDSNSPPNTFAENLNLLRSFYTEYAQSLSFYQHTPSLGAAGLQAQRQEQHSPVDALMRVFPNHRRSDVEQLMQRFRGDVFRIIDCLLAGKDLPQMPPMPVQTYFPLLKAQAHRSLAET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -