Dnig017715.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- lilli_1
- Assembly
- GCA_004149445.1
- Location
- SCDR01000284.1:26303-35533[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.1e-09 2.9e-05 24.1 12.6 5 247 6 230 2 261 0.52 2 8 1 2.7e+04 -10.5 26.1 431 487 416 469 410 480 0.54 3 8 1 2.7e+04 -8.4 19.2 139 184 472 516 464 547 0.38 4 8 0.41 1.1e+04 -4.2 0.2 494 511 592 609 580 612 0.62 5 8 0.0014 36 4.0 7.0 424 476 691 744 646 755 0.45 6 8 0.075 2e+03 -1.8 8.1 107 206 786 888 774 905 0.44 7 8 1 2.7e+04 -10.6 23.5 72 200 841 971 833 1006 0.41 8 8 1 2.7e+04 -6.0 18.7 102 183 1051 1131 1018 1167 0.43
Sequence Information
- Coding Sequence
- ATGGAGGATCCCGAGCGGCGGCGAAGACGCGAGCGCGAGAAAATTGAACGGCAACAGGGCATCCAGAGCGACGATCGGGAGACGAGTCTGTTTGGGGAGCCGCGTCGCCTGAATCCCAGCGAGGGTGATCCGAATATAACCGCCGCTTTGGGTGACTACACCGATGCCCGGGATTACATGAACTCTTCCACGGTGGGCATTTACAGGCAGACGCCGGGCGCGTCGAATGCGCGGCTGCAGGCGCTGCCGAAGGGTTTtggcagcgccgccgccatcaGCTCCACCTGCTCCACATCCGCCTCCtccacatcagcagcagcagcagctgcagcagcagcatcagcagcagcagccgccgcatcagcatcagcctcATCCGCCTCGGTGCCcacatcacagcagcagcagcagcagcaacaacaacactatcagcagcagcagcgggcgcCCACCTATCTGAAGCAGGCGGACAACAAGCCGCCCTACAATGGGCGTGGCGGCTATCCCGGGCAGCCGATGAAGAACGACATACCCTCGAGTAGCGGCATGGCGCCGCCTCGCGGCCCGCCCAGATcgtccgccagcagcagcagcaacaacaactcgtcCAGCGCCACAAACAATGcctcagcggcagcgacgtcagcgtcaACGTCCTCGCCCCTCGGCCCGCCCATGTCCACGCAAATGCCGAACGGCCGAGAGAAATCGTTTCTGGggccgccggcgccggcgctgccCAACGGCGGACGCTTCGTGCCGCCAGCGGCCAGCAGCAAGCGACCCAGCGGCACCACCGCCGGACTGCAGCCACCGCCACCAGAGAAGGATATTAGCAAAATAATCACCGAAATGACCAACAATTATCGTGTGACCCCGCTGACCTCGATCGCGGCGACGCCGCACGCTCCGATGCGCGAGAACTACAACCTGAATGGGCCCAATAAGTTTAAGTATGCATTTGACGCGGTGGATCCCATCAGTTCCCCGCCGGCGGCGAGCGCCTCCTCGCTGATGACGCCGCTGCTGACGCCGATAGCGCCGATCACATCGCCGATCGCCCCGCTGCTGACAACGCCGCCGCAGGCCACCCAGCTGCCACTGCCCGCCATGGTGGGCGCCACAACGCTGCCCACCTCCATGGCCATGGCCGCCGTCGTCACGCCCATTCAGCAACTGACGCCGACGCCCCCAAAAGCGTCGCCTACGCCGCCAGCGATAAAGCCGCTAAAAACGGAAAAGAATCACACGCTGGAGAAACAGGATTCATGCCTCGAGAACGATTTAGAGCTCTCCGAATCCGAAGATGAACGCAAAAAGGATGGTCGGTcagctggcaacagcagcaacagttccgAGTCGGATTCCAGCGAATCGGGCAGCGAGGCGAGCAGCAAAGGCGAcgcacagcatcagcagcagcagcacctgctgcaccagcaacagttgctgctgcaacagcaacaacaacaccaacaacaccaacaacaacagcagcagcagcagcagcagcagcagcagcaacgtctCGCGggcagcaaaaagaaatacagCCAGACGATAATTGCGAGCGGTGCGAACACGATCAGCGGTCTGCTCACCTCGAGTGGTTTGGGCggtgcagcaactgttgctgctgccgctgctgcggctgctgctggtgctggtgtcGGTGGCAATGTGAACGCTGcgtgtgttgttgctggcggcggcggcggcagcactGGCGGCGGTTCAACCTGCTCCGGCATGGGCACACTGAGCAGCTCCAGTTCGTCGAACAAGACGCCCTCGCCGACGGACAGCAACCGCTGGAATCTGTCCCGTTTCTTTCCGAAGCCGGCGAATCAAAATGCCGCCGAAAGCGTCTCCCCCGGCAACGTTGGCAACGTGAGCATGAAGGTGCCGGGCATCCTGCCCGGCGGTGCGCAGATCATACCCGAGTCCATCGAGGTGACCACGGCGATTGTGAAGAACGAGCAGCTGCACGAGGATGTGCGCCAGGTGGGCGTGGACGAGGAGGCGGGCGTGGAAGCTGAGcgctacagcagcaacatgagcGTAACTGTGAAGAAGGAgcaactggagcagcagcagcagcagcaacagcagcagcaacagttgctgacGGCGGAACAGCTGACGGCGAATCAAATCAAGCGCGAGTCGCGTCTGTCCGAttccgccagctgcagcagcgccaccggcagcagcagcagcagcagcagcgacggcgccgagttgccgctgccgctgcccggGCCCGGCGAAACGCTGCAGATACCCGGCGTGCCGGCGGCGATAACCAGCGTGCTGCGCCTGCCGCCCGCCACGGTGCACAAGGCGCCGCCCAACCACGTGACCTTGACGCCCATCGGACCGCTGCCGGCGTCGCCGAAGCAGCGCCAGAAAAAGCcgcgcaaaaagaaaatCGGCAAGCGCAAAAGTGATAAGAAGAAGATTTGCACGCTGACGCGCATCTTCAATCCCAAAGAGGGCGGCGCCAAGAAGCAGGGCCAGGTCGTGATCATTGATCAGtccgaggagcagctgcagcagcagcaacaacaacagcagcagcaacaacagcagcaggccaaaGAGTTTAAGGcgcgtgccacgcccacacagctGCTGGGCGCCACGCTGGCGTCGCCGGCGCGCACAACAACCCCTCATCTCACCTCGCTGATGTGCAAAATCGATCTGACAAAGTTGGCGCGAGTGCCGCCCGAATGGTATCAGAACAGCTACCGATTGTACGCGGACAACCACCAacatcaacaccaacaccaacaccaacatcagcagcaacatttggaGAGACTAAAGACGCAACAAAACGGGCATCTCAGCGGTCGCTCGCccaaggagcagctgcagcagcaacagcagcagcatttgctgcagcagcaacatgcgcAATATGCGCCCAATGGCTatgtgacagcagcagcagcaactgttgccgcTGTCTCCAAGCTGCTCGGCGGCGTCAAGCACGAGCACGGCGTCAAGCCAGAGCCGGAGCTGGACGCCGGCTATGCGGAGGCCAAATTCAAGCCGAATCACGTCAAGCAGGAGTTCCTTTTGAAACAGGagctgccggcggcggcgcgaCGACGCAAacgcagctccagctccagttcgagTCCCTACAAGGAGAAGAAGCGGAAAAAGGAGAAGCCCGAAAAGGAGCTGCCGGTTCTGCTGCCCGCCAACAATCACGAGCGATTATCGCGCGACAAGCTCGAGCTGCTCGAATCGGCAGCCAACGGCAGTCCCAAcaagccgcagcaacaacatcagcagcaacatcagcatcagcaacagcagcgccaattGCCCATGtcacaaacacaacagcaacagcagcaaccaacagcagcaacagcagcagcagcagcgccgctgccggcaactgttgccgctgttgttgcagccacACAACTGCCAACCACCTGCAGCGAAGCGGTGCAAacgacgccgccgccagcggcgccccctcccgccccccgCCTCATCTACCGCTCCCACTTCGACAACGAGGAGGAACACGCCGGCGACGACACCCTCAGaAAAAACGATCTGTTGCTGCAGGAGGCAATCCGGAGAAAGCGTGCCGCAGATTCGGAGCCTGATTCCTTCAACCAGATGACGCTTTACCTGGAGGCCATTGTCTACTTCCTGCTAACCGCCGATGCGATGGAACGTTGCAACATGGAGGCCACGTGGACCATGTACAAGGACACCCTGTCGCTAATTAAATACATTTCCTCGAAGAATCGACCCTATCAGCAGCTAACGAATGGCAAGCACGCATCGCACAATATAGTGGCCATACTCAGTTTGCGCTGCCAATCGCTGATATCCCTGAAACTTTACAAACTGCGCCGTGCAAATTGTCGAGCTATCATCACCAACTGCACGGAATTCTTTCGCACGGGCAGGGGGGATATATTAAATGGCAATACGCCGTCCTCCATATCACCGTCGAACTCGGTGGGCTCTCAGgGCTCCGGTTCGAATACGCCGCCTGGCAAAATAGTGCCTCAAGACATACACAATATGCTGTGCAAGCAGAACGAGTATCTCACCTATGTGAATAGCGCTCATGAGCTGTGGGATCAAGCCGATCGATTGGTGCGAACCGGCAATCATATAGacTTTATACGCAAACTGGATCACGAGAACGGGCCGCTGACGCTGCATAGCACGATGCACGAGGTGTTTCGCTACGTGCAGGCGGGCTTGAAGACGCTACGCGATGCAGTCTCGTATCCACAGTCGCAGTAG
- Protein Sequence
- MEDPERRRRREREKIERQQGIQSDDRETSLFGEPRRLNPSEGDPNITAALGDYTDARDYMNSSTVGIYRQTPGASNARLQALPKGFGSAAAISSTCSTSASSTSAAAAAAAAASAAAAAASASASSASVPTSQQQQQQQQQHYQQQQRAPTYLKQADNKPPYNGRGGYPGQPMKNDIPSSSGMAPPRGPPRSSASSSSNNNSSSATNNASAAATSASTSSPLGPPMSTQMPNGREKSFLGPPAPALPNGGRFVPPAASSKRPSGTTAGLQPPPPEKDISKIITEMTNNYRVTPLTSIAATPHAPMRENYNLNGPNKFKYAFDAVDPISSPPAASASSLMTPLLTPIAPITSPIAPLLTTPPQATQLPLPAMVGATTLPTSMAMAAVVTPIQQLTPTPPKASPTPPAIKPLKTEKNHTLEKQDSCLENDLELSESEDERKKDGRSAGNSSNSSESDSSESGSEASSKGDAQHQQQQHLLHQQQLLLQQQQQHQQHQQQQQQQQQQQQQQRLAGSKKKYSQTIIASGANTISGLLTSSGLGGAATVAAAAAAAAAGAGVGGNVNAACVVAGGGGGSTGGGSTCSGMGTLSSSSSSNKTPSPTDSNRWNLSRFFPKPANQNAAESVSPGNVGNVSMKVPGILPGGAQIIPESIEVTTAIVKNEQLHEDVRQVGVDEEAGVEAERYSSNMSVTVKKEQLEQQQQQQQQQQQLLTAEQLTANQIKRESRLSDSASCSSATGSSSSSSSDGAELPLPLPGPGETLQIPGVPAAITSVLRLPPATVHKAPPNHVTLTPIGPLPASPKQRQKKPRKKKIGKRKSDKKKICTLTRIFNPKEGGAKKQGQVVIIDQSEEQLQQQQQQQQQQQQQQAKEFKARATPTQLLGATLASPARTTTPHLTSLMCKIDLTKLARVPPEWYQNSYRLYADNHQHQHQHQHQHQQQHLERLKTQQNGHLSGRSPKEQLQQQQQQHLLQQQHAQYAPNGYVTAAAATVAAVSKLLGGVKHEHGVKPEPELDAGYAEAKFKPNHVKQEFLLKQELPAAARRRKRSSSSSSSPYKEKKRKKEKPEKELPVLLPANNHERLSRDKLELLESAANGSPNKPQQQHQQQHQHQQQQRQLPMSQTQQQQQQPTAATAAAAAPLPATVAAVVAATQLPTTCSEAVQTTPPPAAPPPAPRLIYRSHFDNEEEHAGDDTLRKNDLLLQEAIRRKRAADSEPDSFNQMTLYLEAIVYFLLTADAMERCNMEATWTMYKDTLSLIKYISSKNRPYQQLTNGKHASHNIVAILSLRCQSLISLKLYKLRRANCRAIITNCTEFFRTGRGDILNGNTPSSISPSNSVGSQGSGSNTPPGKIVPQDIHNMLCKQNEYLTYVNSAHELWDQADRLVRTGNHIDFIRKLDHENGPLTLHSTMHEVFRYVQAGLKTLRDAVSYPQSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -