Dnig006051.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- -
- Assembly
- GCA_004149445.1
- Location
- SCDR01000061.1:11120-12104[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3 1.3e+04 -2.8 0.0 14 43 33 65 25 78 0.61 2 3 5.5e-11 2.1e-07 31.8 0.0 10 81 128 189 124 197 0.77 3 3 6.6 2.5e+04 -3.7 0.0 6 20 260 274 253 277 0.65
Sequence Information
- Coding Sequence
- ATGGACAATCCTCGCGAGCATCTTCATTGCCGCAGAAGAGGCTGCACTTACACCACGAATAGGGCGTACAATTTGGAACGTCATGAACGTAACCATGACAAGGGCAAGGTTCCAATATCCCAGTGCCAGCCGTGTCCCCACTGCAAATACGCCGCCGGATCGCTGCACAATTTGATGCGACATATAAGTAAAAAGCACACAGAAGCGACTGTTGAAACAACAACTCTTGTAACCAGTAGCGGACAAGCAAAGGAACACGATGATTTGCCTGCTATGAAGAAGTCACTGATTAATCTCGCACCAATTCCTGAGCTTGACCAACCTCTGGAACAACCCGTGGAATTGTCGCTTTGGCATTGGAGCacaccgcagcagcaggagaggAATTTCCTAAGGCGAAGCGGCTTAGAAGCTGAATGTACGATTTTGGAACGGAGCGTCAATCTGTTTAAATTGTACGCGTTGGTGAAAGCGCGCGGAGGAGCTCTCAATGTGGACGAATGGGATGATATAGCAGCAGCCTTGGGCCTGCCCCCAGGCTCAGGCTGTAATGTGGGCGTCAAGTACATGGAGATGGTTTTCGAATTTGAGAAGAAAGATGAAGAGCGTCTGCAAGAATGCCAGGATGTTAAAGACGTACCGTCTTGGTGGGATGACGGGAATTTTATGgtcgataaaaataattataggaATGaagatattgattttaatagcAAATTGGGGTGGGACTTAAATCTTCCTTCTGTTACCGTTCAAAATGCTATTGTTAAACTGATTTACGACAAGTATTATAGCTATCATTTGCGCAACAGCCAACCATTTCAACGGTTCCACTTGAAGGACTCGTGGCTACGGGCGACTATGTTGAATTATCGAgcgttaaaaaacaaaatacatttgagACATTGCTCTGCCTCCTGA
- Protein Sequence
- MDNPREHLHCRRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCKYAAGSLHNLMRHISKKHTEATVETTTLVTSSGQAKEHDDLPAMKKSLINLAPIPELDQPLEQPVELSLWHWSTPQQQERNFLRRSGLEAECTILERSVNLFKLYALVKARGGALNVDEWDDIAAALGLPPGSGCNVGVKYMEMVFEFEKKDEERLQECQDVKDVPSWWDDGNFMVDKNNYRNEDIDFNSKLGWDLNLPSVTVQNAIVKLIYDKYYSYHLRNSQPFQRFHLKDSWLRATMLNYRALKNKIHLRHCSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597938; iTF_00588650; iTF_00567322; iTF_00541560;
- 90% Identity
- -
- 80% Identity
- -