Dmea015616.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- -
- Assembly
- GCA_004143765.1
- Location
- SCDT01002038.1:9817-10838[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9 9.8e+03 -2.8 0.0 18 42 37 64 25 77 0.59 2 3 4.4e-11 1.5e-07 31.9 0.0 10 82 125 187 121 194 0.76 3 3 1.9 6.6e+03 -2.2 0.0 56 84 235 260 224 265 0.65
Sequence Information
- Coding Sequence
- ATGGACAATCCTCGCGAGCATCTTCGTTGCCGCAGAAGAGGCTGCAGTTACACCACGAATAGGGCGTACAACTTGGAACGTCATGAACGTAACCATGACAAGGGCAAGGTTCCAATATCCCAGTGCCAGCCATGTCCCCACTGCAAATACGCCGCCGGATCGCTGCACAATTTGATGCGACATATAAGTAAGAAGCACACAGAAACGACTGTTAAAACAGCTATTGTAACCAGTAGCCGACAACCAAAGCAACACGATGATCTGCCTGCTATGCAGAAGTCATATATCGCATCAATTCCGGAGCTGGACCAACCTCTGGATCAGCCCGTGGAATTGTCGCTTTGGCATTGGAGCAcaccgcagcagcaggagaagaATTTCCTACGGCGAAGCGGCTTAAAAGCTGAATGTACGATATTGGAACGGAGCGTCAATCTGTTCAAATTGTATGCGTTGGTGAAAGCGCGCGGAGGAGCTCTCAATGTGGACGAATGGGATGATATAGCAGCAGCCTTGGGCCTGCCCACAGGGTCAGGCTGTAATGTGGGCGTCAAGTATATGGAGATGGTTTTCGAATTTGAAAAGAAAGATGAAGAGCGTCTGCAAGAATGCCAAATTGTTAAAGGCGTGCCGCCTTGGTGGGATGACGGGAATTTTATAgtcgataaaaataattataggaATGAAGATATGAATTTGAATAACAAATTAGGGTCGGACTTAAATCTTCCTTCTGTTACTGTTCAAAATGCTATTGTTAAACTGATTTACGACAAGTATTATAGCAGTCATATGCGCAACAGCCAACCATTTCAACGTTTCCATTTGAAGGACTCGTGGCTAAGGGCGACTATGTTAAGTTATCgcgcattaaaaaacaaaatacattcgAGACATTGCTCTGCCTCCTGA
- Protein Sequence
- MDNPREHLRCRRRGCSYTTNRAYNLERHERNHDKGKVPISQCQPCPHCKYAAGSLHNLMRHISKKHTETTVKTAIVTSSRQPKQHDDLPAMQKSYIASIPELDQPLDQPVELSLWHWSTPQQQEKNFLRRSGLKAECTILERSVNLFKLYALVKARGGALNVDEWDDIAAALGLPTGSGCNVGVKYMEMVFEFEKKDEERLQECQIVKGVPPWWDDGNFIVDKNNYRNEDMNLNNKLGSDLNLPSVTVQNAIVKLIYDKYYSSHMRNSQPFQRFHLKDSWLRATMLSYRALKNKIHSRHCSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560825;
- 90% Identity
- iTF_00567322;
- 80% Identity
- -