Basic Information

Gene Symbol
Ubp1
Assembly
GCA_004149445.1
Location
SCDR01000750.1:170-13325[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-58 4.1e-54 183.8 0.5 18 222 397 595 381 596 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCATAATTCCGGCGTGTTGGATTTACAAAGCATATTTGATCCACAATATtcattgcaacagcaacagcagcaacaattgcaagtTCATTTACCatcacatcaacaacaacaacaactacaaacatCGCGCACTTCAACGAAATTtgatttaagcatttttaacGATTTCGACCAAATGGAATTCAATAACAATTCGAGTCGAAACCATAATCAGTatcagaataataataataataataacaacaaccacaataccaataataacaacattcATACGCACCAGACCAACGGTGAAAATCTTAATCAGATCCAAAATCGTCATTTTATTAGCGGCTATCATCATCAGCATATTGGTTCGGATTATGAGCAAGTGATTAACTTTGTTGATTCACCACCGAATTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCGGGACCTCAAATAATCGACGTACGGACAATTTATTCAGACAGTGGATCACGCAAAAGACGAATGGATTGGGACTCATTGGATATCGGTCAAAGTGAAAATTCGCCGACAACACAACAATCAGGCGATATACCCAATAAAGTGTCACATCAGGAGAAAGATAAACACAAACGCGAAAAGCATTCAGgccgcagcagctggagcgACGAAATAGGTTTCGATCTGAACGCCGAGTTTAATAGCAACTCATACTTGAACAAtgaaAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTGAAACAAGAGCCGCAAACCGAGCAGCTCAAAGCGAATACAAAGCTACCCTTGGACAGTgtcggcggcaacagcaacaacaacagcggctcCGTTGCATTGGTTAACATTGGCAAGATCGATAAATCGCCATTGGGCGAGGCCAATCATTCGCCGCAGCGCACGGGACTGGCACAAGAATCGGttggcgcagcagcaacaggtggcaacagcagcggcaacggcagtgGCAAGCATGAGTTGAACGCAGGCATCctctgtggctgtggctcGCCGCAAGGATCGCCCGCCGCCGCAACGGATTTTGAACTGAATGGAAATGCAGCTACAGCTGATAAAACCAAAGCTGCAACGGGCAACGAGGCCTATGCACTACGCTCtggactgcagcagcagctgagcgtTGTCGAGGCAGCTAAAATTGAGCCCAGCTCATCCGCTGGTTCATCACATGCAGAGGATCATAAATTTCAGTACATTTTGGCAGCGGCCACCTCGATTGCCACAAAGAATAATGAGGAGACTTTGACCTACCTAAATCAGGGTCAAAGCTATGAGAtcaaattgaagaaaattgGTGATTTATCTTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGGCGCTTGCAGTTTATGGAACGCGAACAGATGCAGCAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTGGATGTACCGTTATCGTATGGCCTGTGCCATGTGTCGCAGCCATTGAGCTCGAATGCGTTGAATACGGTCGAGATATTTTGGGATCCATTGAAGGAGGTCGGTGTTTATATCAAGGTCAATTGCATTTCAACCGAGTTCACACCAAAGAAGCACGTCCTcggcaacgccagcagcggctCCATCTCCGGCCTGGCCGCACTCAATGGCAAGCAAGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTCTTTAAGCTGAAAGGCGCTGATCGCAAGCATAAACAGGACCGCGAAAAGATACAAAAGCGTCCGCAATCTGAGCAGGATAAGTTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGGTAACCCCAGCGACCACTACAGGCTGTTACAGTCCCGAATATATGAAACTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGAATGCTGCCATTTGCCAGCAGCGCTTCAccggcggccagcagcagccccatTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAACATGGTTTCGCCGCAGCATGTGCCAGCGGATATGGATGATTATAATCAGAACATATTGCCAGAATCAACGCCAGCACAAGTGACACAATGGCTGACAAATAATCGTCTGACGGCCTACCTCACCACATTTGCCCATTTTTCGGGCGCGGACATTATGCGCATGTCTAAGGAGGATCTTATACAAATCTGTGGACTTGCCGATGGCATACGCATGTTTAACATTCTGCGCGCCAAAACAATTACACCACGTCTGACGCTCTACGCCAGCATGGATGGCTGCAGCTACAACGCCATCTACTTACTGTCTAATACGGCCAAGGAGTTGCAGCAGAAGATCTACAAGCTGCCGGGTTTCTATGAGTTCATGGCCAAGGCCGGCTCTGCTGGCAACTTGGAGAATGGCggcgtggcagctgcagcggcggctgctgccgctgcgctcTACAACAATTGGGGCATGCATTCAAAGTACTCGGGCAGCGGCTCTAATATATTCAACGATGTCAACAAGTGTTGTGTGTACATTTCGGGTCCCTCGGGCATACATGTCAGCATCACCGATGAGGTTCTCAACAATGAGGTCAAGGACGGCAGTCTCTATGCTCTGGATGTGCAGGGCGGCAAAgttatattgaaattgatcaACAAGCAGGACAACAATTAA
Protein Sequence
MALSFLSHNSGVLDLQSIFDPQYSLQQQQQQQLQVHLPSHQQQQQLQTSRTSTKFDLSIFNDFDQMEFNNNSSRNHNQYQNNNNNNNNNHNTNNNNIHTHQTNGENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWDSLDIGQSENSPTTQQSGDIPNKVSHQEKDKHKREKHSGRSSWSDEIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKANTKLPLDSVGGNSNNNSGSVALVNIGKIDKSPLGEANHSPQRTGLAQESVGAAATGGNSSGNGSGKHELNAGILCGCGSPQGSPAAATDFELNGNAATADKTKAATGNEAYALRSGLQQQLSVVEAAKIEPSSSAGSSHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHVLGNASSGSISGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVTPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNILPESTPAQVTQWLTNNRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTITPRLTLYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKAGSAGNLENGGVAAAAAAAAAALYNNWGMHSKYSGSGSNIFNDVNKCCVYISGPSGIHVSITDEVLNNEVKDGSLYALDVQGGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
iTF_00530033;
80% Identity
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