Basic Information

Gene Symbol
Ubp1
Assembly
GCA_004143845.1
Location
SCDZ01000157.1:162704-174597[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.2 1.4e+03 -1.5 1.6 99 129 25 55 19 108 0.78
2 2 4.1e-50 2.8e-46 157.8 5.6 19 222 400 585 384 586 0.90

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAATTCCGGCCTGTTGGATTTACAAAGCATTTTTGATCCACAATATtcattgcaacaacaacaacaacaacatcaacaacaacagcagcaacatattCATTTACCAtcacaacaagaacaacaacaacaactgcaaacatCGCGGATTTCAAcgaaatttgatttaagcatTTTCAACGATTTCGACCAAATGGAATTCAATAACAATTTGAATCGAAACCATAATCAGTAtcagaataataataataataacaacaataataacaacaaccacaataccaataacaacaacaacaacattcatACGCACCAGACCAACGGTGAAAATCTTAATCAgatccAAAATCGTCATTTCATAAGCGGctatcatcatcagcatattGGATCGGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCAAACTCTGAAGAATCTTGGACAGACGGACAGTCCAAGGATTCGCCGGGACCGCAAATAATCGACGTACGGACAATTTATTCAGACAGTGGCTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATCGGTCAAAGTGAAAATTCACCGACAACACAACAATCTGGCGATATACCCAACAAGGTGGCACACCACGAGAAAGATAAACACAAACGCGAAAAGCATTCAGgtcgcagcagctggagcGACGATATTGGTTTCGATCTGAACGCCGAGTTTAATAGCAACTCATATTTGAACAATGAGAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTCAAACAAGAGCCGCAAACCGAGCAGCTCAAACCGAATACAAAGCTACCCttggacagcaacaacagcagcagctccgtTGCTTTGGTTAACATTGGCAAGATCGATAAGTCGCCATTGGGCGAGGCCAATCATTCGCCGCAGCGCACGGGACACGGGGCACAGGAGTCGCTAGGCGCCGTTGCTGCAACAGGTGGCAAGCATGAGTTGAACGCCGGCATTGTGTGTGGCTGCGGCTCGCCGCAAGGCTCGCCAGCTGCCGCAACGGATTTTGAACTGAACGGAAATGCAGCAACTGCTGAGAAAACCAGAGCTGCCACGGGCAACGAGGTCTTTCCACAAGCGCCAGGCTCtggactgcagcagcagctgagcatTGTCGAGGCAGCCAAAATTGAGCCCAGCTCGTCCGCTGGTGCTTCACATGCCGAGGATCATAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCGACCAAGAACAATGAGGAGACGTTGACCTATCTAAATCAGGGCCAAAGCTATGAGATCAAATTGAAGAAAATTGGCGATTTATCTTTTTATCGTGATAAGATTTTGAAGaGCGTTATCAAAATCTGTTTCCACGAGCGTCGTTTGCAGTTTATGGAACGCGAGCAGATGCAACAATGGCAGGCATCTCGTCCTGGCGATCGGATCATTGAGGTGGATGTGCCATTGTCGTATGGACTGTGCCATGTGTCGCAGCCATTGAGTTCGAATGCATTGAATACGGTCGAGATATTTTGGGATCCGTTGAAGGAGGTCGGTGTTTACATCAAGGTCAATTGCATTTCAACCGACAGCGGCTCCATTGCCGGCCTGGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATCAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAACAGGATCGCGAAAAGATACAAAAGCGTCCGCAATCCGAGCAGGATAAGTTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCCCTGGATCTGGTGACGCCAGCGACCACAACGGGCTGCTATAGCCCCGAATAtATGAAATTGTGGCCCAATTCGCCGGTGCATATACCAAAATATGATGGAATGCTGCCATTTACAGCCAGCAGCGCATCAccggcggccagcagcagcccaatTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCAGCATGTGCCAGCGGATATGGATGATTATCAGAATCAGAACATAATGCCAGAATCAACGCCCGCACAAGTGACACAATGGCTGACAAACCATCGTCTGACGGCCTATCTCGCCACATTTGCCCATTTCTCGGGAGCGGATATCATGCGcATGTCGAAGGAGGATCTTATACAAATCTGTGGACTGGCCGATGGCATACGCATGTTCAATATTCTGCGCGCCAAAACGATTACACCACGTCTCACCCTCTACGCCAGCATGGATGGCTACAGCTACAACGCCATCTACTTACTATCGAACACGGCCAAGGAGTTGCAGCAGAAGGTCTACAAGCTGCCCGGTTTCTATGAGTTCATGGCCAAGGGCGGCTCCTCGGCGGCCAATCTGGAGAATGGcggcgtggcagctgcagcagcagccgccgctgcggcTCTGTACAACAATTGGGGCATGCATTCAAAGTACTCGGGCAGTGGCTCGAACATTTTCAACGATGTGAACAAGTGTTGTGTTTACATTTCGGGTCCTTCGGGCGTCCATGTCAGCGTCACCGATGAGGTGCTCAACAATGAGGTCAAGGACGGCAGTCTCTATGCTCTGGACGTGCAGGGCGGCAAAGTTATATTGAAGTTGATCAACAAGCAggataacaattaa
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSLQQQQQQHQQQQQQHIHLPSQQEQQQQLQTSRISTKFDLSIFNDFDQMEFNNNLNRNHNQYQNNNNNNNNNNNNHNTNNNNNNIHTHQTNGENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWDSLDIGQSENSPTTQQSGDIPNKVAHHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNTKLPLDSNNSSSSVALVNIGKIDKSPLGEANHSPQRTGHGAQESLGAVAATGGKHELNAGIVCGCGSPQGSPAAATDFELNGNAATAEKTRAATGNEVFPQAPGSGLQQQLSIVEAAKIEPSSSAGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYIKVNCISTDSGSIAGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVTPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFTASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYQNQNIMPESTPAQVTQWLTNHRLTAYLATFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTITPRLTLYASMDGYSYNAIYLLSNTAKELQQKVYKLPGFYEFMAKGGSSAANLENGGVAAAAAAAAAALYNNWGMHSKYSGSGSNIFNDVNKCCVYISGPSGVHVSVTDEVLNNEVKDGSLYALDVQGGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
iTF_00560803;
80% Identity
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