Dnig015949.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- dsx
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000916.1:4473277-4477641[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-24 7.3e-21 73.9 9.8 2 47 41 86 40 86 0.97 2 3 5 2e+04 -16.1 15.4 10 22 128 140 127 144 0.82 3 3 5 2e+04 -12.0 8.7 10 21 146 157 145 159 0.77
Sequence Information
- Coding Sequence
- ATGGCTTCGGAGGAGAACTGGAACAGCGACACCATGTCCGATTCGGACTTGATCGACTCCAAGAACGATGTGTGCGGCGGCGCCtccagcagcagtggcagttcCATCTCACCACGCACACCTCCCAACTGTGCACGGTGCCGCAATCATGGCCTCAAAATAACGCTCAAGGGGCACAAACGCTATTGCAAGTTCCGTTATTGTACGTGTGAAAAATGCCGATTGACCGCCGATCGACAGCGTGTGATGGCTTTGCAGACGGCGTTGCGACGCGCTCAGGCACAGGATGAGCAGCGTTCTTTGCACATACATGAGGTGCCACCCGCATCGGGATCAACGACGCCCACATCATTGCTTGGCGGCCATCATGGCCATCATGGTCATCAtggtcatcatcatcatgtgCATGGCCACGCCCATGGCCACCCACATGCTGCCCATTCGCATCATAGTCACAGTCACGGCCATCACGCACATGTGCTGCATCATCAGCAGGCAGCGGCTGtggcagccgcagccgcagcagcggcagcatcagcaacagcaccaccacAAGCACCACAGCAACAAGCGCAGACACAGCAGACGCAGCCACAGTCGCAGCAGTCGCATTTGGGGCACGCCCATTCGCACAGTCATGCAAATGTGCATCATGCTCAAATGGCTGCCGCTGCAGCGGCCACAGtggtgcaacagcaacagcaacaccaccatcaacatcagcaccacaacaatcagcagcagcaacagcagcagactcATCAGGCTGCCTTAAGATCTCCATCGCACAGTGATCCGggtgcagccagcagcagctcagtTGGTGGCGCCAGTTCCAGCAACAATGTGGCACCTGCCACAAGCAGcggtgcaacagcaactggtgGCGGTGGCTCCAGCAGGGCCAGTGGTGCTGGCATCAGCGTAATTACCAGCGTCGATCATCACATGTCAACGGTGCCTACACCAGCCCAATCTCTGGAGGGCTCCTGCGACTCATCGTCGCCCTCACCATCGTCCACATCTGGCAACGCCGTGCTGCCCATCTCCGTGTCCAGCACTCGCAAGAACGTGCCACTCGcCGTAGCTCCCGTTTTGAGTGACTGCATTTGGTCGCCTGGTGAGGAGAGTCCCGGCGTCCGCGATTCCGTCATTCCGCATCACAATTGA
- Protein Sequence
- MASEENWNSDTMSDSDLIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRSLHIHEVPPASGSTTPTSLLGGHHGHHGHHGHHHHVHGHAHGHPHAAHSHHSHSHGHHAHVLHHQQAAAVAAAAAAAAASATAPPQAPQQQAQTQQTQPQSQQSHLGHAHSHSHANVHHAQMAAAAAATVVQQQQQHHHQHQHHNNQQQQQQQTHQAALRSPSHSDPGAASSSSVGGASSSNNVAPATSSGATATGGGGSSRASGAGISVITSVDHHMSTVPTPAQSLEGSCDSSSPSPSSTSGNAVLPISVSSTRKNVPLAVAPVLSDCIWSPGEESPGVRDSVIPHHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597377;
- 90% Identity
- iTF_00496615;
- 80% Identity
- -