Basic Information

Gene Symbol
TRERF1
Assembly
GCA_035044305.1
Location
JAWNMF010000916.1:2517098-2531578[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-09 4.1e-06 26.9 0.1 2 45 1739 1782 1738 1783 0.94

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTATCCAAAAGCATACACCTGCCTCTGACGAATCTCAGCGCTCAGCGTGTGTTGATGTGCAGCGCCTCTCTGGGCAGTGAGGGATCCGTAACACTGCAACTGAGAGATGCGAGTACCTTGGAGACAGCCGATagcacaacaccaacaccaacaacaacatcgacatcagcaacagcagcagcagcaacaacaacaacatcacatCCAATAGCAACATCGTCATTGGGCAACCAAACAAATGGCGTCACTCTGCTTGAGACATCGTCTTCAGCGACGTCAGGAATAACGTCAGCATTAGAGAATGCGCTGACCGTTGGCTATCCGGATCCGGAAATGCTTGCAGATGTTTTAGGCACCATACAGACAGCCTctCTTAAAAACAAgcatagcaacaacaataataatagcaacaacaccagcatcaaaagaagcaacaacaacaacaataacatcaacaagagcagcagcacagcagcgaCGATTCTGAACAACTCCGGGATACATCTGAACAGTCCCAATAAAATAACGATAACACGTCGCAGCGCCAGCAACAAGATTAGCGTACAGACTGTGAGCACATCGACGAACACGACGATTAGCAGCATTGGCGGTAGCAAGACCAACTACATTAAGAACTGTCTAatacgcagcagcagctgcagcaacacgGCCACCAATGTCACAACGTTGGCACAGATtctgagcaacagcagcaccagcagcgcaGCCAGTTTACTCAgtcagcacaacaacaatagcaactgcagcaacagcagcaactttaGCATCGCATCCTCTGTGGGCAGCATTGGCAGCGTCAGCAGCATcaccagcaacaccagcagcagcagcaattgcagcagcagcaacagcaacgatagcaacagcagcatcggTCAAAGTTTAAGCTTCAAGAGCAATGGTCGAAATGTTGCTGGCATAGTCGCTGCATCAACAACATCCaccagcacagcagcaactggcattggcattgtcaCCGTCGACAACGCGCCCAGAAAGAGCCGCCCCAAGTTATCCTCCCCTACGCGGCACGGACCACAGCAGTGTCAGATTTGTAGCAAGATCTTTGGAAATGCCTCGGCGTTGGCCAAGCACAAACTGACGCACAGCGACGAGCGGAAATATATTTGTGCGCTTTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACGCATCGCAACAAGAAGCCTTACGAGTGTCGAGCGGATGGCTGTGGCAAATCTTATTGCGATGCGCGTTCCCTTCGTCGTCATTCGGAGAATCACCATGGATGCGTGCCCATCAGCGAATCACTCTCGCCCACGGCCAGCACCAACGGCATCGGCAGCAtcattggcagcagcaacagcaacggcatcGGTGTCGCCACCAGTTCCCTGAGCCTATCGCCGGCCACGGCCAGCGGGGATGCCAGTTCACCAGATGGAGCCACCTGCATTCGCACATATATTTCCACTGGCAGCTCCATTGTGGATGCGGCCACTGGAATTGCGCTGTCCGATGAGCAAATCAGGGCAATGAATTTGCCCATCAAAACGGGTGTTACTCTGCTCTCGCCCACCACATCGACATGCTCGACCACATCGTCCACCGCATCTTCAGTGTCATGCTCGACATCGGGCAATGTCAACGGCAGCTCCGTTGTGGCCAGTTCACCCACCATAACGCTCTGTGATGGCGCAACGCTGGAGGCCGAGGGACTCACACGGGAGCAACTCGATCTCATCAGCAAGATCATGCAGCAGACAAAGCAAACCAGTGCCCAGGTCACAGTCTCCTCGCCCACCAGCGTGAGCTCTTATAAAATCAATACGGAAACGGCCCAGGTCTCGGCGCGACCAAGGACCTGGAACATGCAATTGCTCAATAATGTGCAAAACGTGACGCTTACCGTGGACGATGGCACCGAACTGGTTGCCTCCGCATCAAGCCCACCCGTCGAGGTAAAGGACGATGAGCTgggccagcagcaacagctagtGACCGCCATAAATCCCCACCTGCTCAACATTGTGAAGGTCGATAAGCCAGTTGAGTGTAATCTCTGTCACCGTAAGTTCAAAAATGTACCCGCCCTCAATGGGCATATGCGTCTGCACGGCGGCTACTTCAAAAAGGATCCAGAGACGAAGCGGAGCGAGAAAAAGGACTCCGGCGGACCCCCACTGCAAACGGCCAGCATTGGAGTACGCGCCCTCATCGAGGAAAAGATTATAAGCAAGCGCAAGGACATCAATAAGGGTGCCTTTGCAGTGCCTGCACCACCCAGCAGTGCGGTTAATAGTGGTGTCGTcagctgcaacaataacaataacaataacagcagcagcaacaacaacaacaacaggaattGCAATCTGCGTCGCTCGATCAGCGACTTGGAGAGTTTTCTCAGTCCGAAGAGTAACGCGAACAGTAGCCTGAGCCAAGCGCTGGCCACCActtgcagcagcaccaccaccacagcGGTGCTGCCCGCTGCGACCACCATTAAGAGCAGCAGTGGTCTAAGCATTCAACAGATTGGCCTACCGCAAAGCATCGAGATCTTCAGCGGTGGCCAGAGACAGCCGAAAACTCTGAGTTTGGGCAGTGGTGCAAACACGATTACGATAACCACCAACAATGTGCCTACGACGACGACAATGAGCGCTCTGTCGGCACTGAAGGGCGCCAGCAGCATTAGCAGTGTCTCTGGCAATGCGGATCCCAAGGATTCCACATTGATTGAGCTACTCAAGCGTGGCACAAGGATTGCTGTCACCTCGAAGAAGGCACAAAACACAAGTACAAATCTGCTGCTCAGCAATGCGGCCAACGCCGAGCTCATTGGCAACGGTGTCCAGGCAGCGAATAGTCGTCAGATCATCACCAATAACAATCGCACAGTGATTATACCCTCGGATGTGCATGTCGTCTCCACAAAGTCCAACAAGGTGAGCAGCAATGGAGCAAACAATGCGAACAGTATTTCTCTGCCGGATGGCACTCCACTCTCACTGACCATTGGAGGCAATCAGGAGAGCATTGGGCCAAGCAGCATCTCGGGTGGAGTCAATGGTGTTTATGCGGTCACCTACACGACCAATACGGATGCAGTCGATCTATTTGGCAGTGCCGAGGTGTTTAATGTCTCGGATACTGAAATGCTGTTGCAAACTGTGGACACAATGGAGCTGTTGAACAATGAGGAAGAGAATGAGGATGAGGGGCACAAGCAAAGCGAACATTCCGAGAACTTTCCGCTGCTCAGCAATGTTGAGGACGATGTGCTGATCAAGTTGGAGCCAGAGTCAGGCACACCCAGCACCAACACCAATGCTAGTCAGACAACAACGCCATTGCCCACGTTCCAGCAATTCCATTCCAAGGAGCTCATCATGCAGAACAGCTCACAGATTCAGGCGATTGCCAATATGCGAGGAGGGGTTCTCTCATCACCATTGCATTCGCCACTGGCTTATCCGACACCGCCGTCCAGTCACGAGAATGTTGCCCAATCCTCGCCTTTTATTGAAGATGCTGCCGCTCAGTTTGTGGACGCCAACCACACATTCTTCGAGGATAAGACGGATTTCTCGCACGTCTACTTCAAGACGGATGACGAttgcatgcagcagcagcaactcagTGAGAATGACAATGAGAAGATACTCAAATTGAAGACGGTGCTGGAGGAGAGCGCTTTTGATGCTTCGATCAAGGTGGAGGATCTCTTAAATGGCACAGAGTGTGTTGCTGAGTGTGATCTGCGTGAATTTGCGGAGACTAATTTGTCGTTTCTCGATGAGGATCAGGAGTTCCTGAATGACTCACGCAATGCCACCTCGCCTCTCTCAGAGTCATTCTTCACCAGTGGCATTGGCTCCGCCGAGGATGTTAAGCAGGTGCTCCGCGAGGTCCTTCCAGATGAGAATATGCAATTGCAGCTGAGCAGCGAACAGCTGGCTGAGAATATCATCGATCTCTACTATTTGCCCGGATTGGGCCTGCAATCGCAAATGATGTCCAACTCGGATGATCCGCTCTTGTCATCTTCTCCCAGAGATTTTGGCCTGCAGCGTCAGGTTGTCCATGCGACTTCATCGACGGTACCGTCCATGGAGCAGTTGCAGTCTTCAGGGATCATGTTTGCgcaccaacagcaactatTGCAgcctcaacagcagcaagaccagcagccacaactgcaacctcagcagcagcagcaacagttgcagatcggccagcagccgcagcagcagcaacagtcggaCTTTATGTTGTCCAACTTTACGCCCGTATCTTGTCAAACGCAGTATTTGGACGCCAATCAGCAGTCGATGACAATGCAGCCACTCAACAGTCTGCTGCAGCCATTACTCTtcggcagcaacaataacggcaacaacaacaacaacagcaacagcatcgatAAGCAACAAGAGTTTGGAACGCTgctgcaaacaacaaacggaCAAACATCCGCTCTGGATGCTAGCCTGATCTTTGCCTGCGGCGACGGAATCAAAAGTAattccaacaacaataagtcgCTGATTGCCAACTTACCCGCAGCAGCTCCAGTGGTGACACCAACACCCAGCTTCTCCAATCTGCAACCGTTGTCCAACCAAACGAATTCCATATTGAAGCGTCGCCTGCGCTCAAATGGTGCACAGGATGTGCACAAGTTCTCCAAATTCCATACGCTATCGCCACATCGCTCCAAGCTGCGCAAACCCTCGCGCACCCATTACACTCCGGCTCCAATATTGAATCCGGATCGTAAGGGCAACGGACTCTATAACAATGTACGCAAGCAAGTTGGTCAAAACATGTTTGATGTCTTTGACGATGATTTTGGTGACCCCGTGGGCCTGGTGGATTTCTCCGACGAGTCCAAGGTGAATCTGGGCTCGACGTATCAGGCGCAGATACCCTCTTGCAAGCCACTCGAAGAGGCCATCAAGGAGACAATGAGCGCGGACATGATGTGGGATCCTAGCGTACAGATCGACGAGAAGATACTGATGCGCTACATAGATCTCAGCAAATCCTCGGCCGTGCCCATGGGCAGCCATTCCGAGGAGGTGGCCCTCCAAGCTCTGCTTGAGGCGAAAGGTAACTCGGCGGCCGCGGTGTTAACCCTTCTGCAGACGCAGTCCAGCGCATTCCAAATGAAATGGACAACCTACGAACTGGAGCAGTTTTTACGCGGCCTGGAAAGACATGGCAAAGACTTTGGCAAAATCGCCAGCGAGCTGCGCACGAAGACATCGGGCGAATGCGTGCAAATGTATTATTTCTGGAAGAAGCTGTGTGTTGATTACAAGGTGTCCCACCTGAAAATGGAGCCAGTGCCGCCCAGCACACCAGTCGTGGAGCAGAAGCCATACGTCTGTGAGATTGCCGACTGCTCGGCGAGCTTCAGCTCGAAGGCGGCGCTGCACGGTCATGTTCGCATACACGCTTATGGTAgaaatgccaacaacagcaacaacagcaacaacaacaacaacaacaatcagcatGCCACGGCAATTagtgccaacaacagcaacaacatccacCATAgttccagcaacagcaacaacaacaccaataacaGCAACGCATGCGCGCCCCAGcccagcagcaatagcaatcaGTGCATCagtgcaacaataacagcaacatcaaccgTAGCGCACACAAAtggcagtaacagcaacaacaccaataccaatgccaacaacaataacagcaacaacaacaacaacagcatcaacagcaacatctcCAATGTAACTGGCACTTCCATAAACACAACGTtgctatcagcagcagcagcaacaacatcgacagcaacaaaagacagcaacagcaacaattccAATATTGCAAAGGACACCGAGTTCCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTGAAAAGTCGCAGCGCCCATATGAAAACGCATCGTGTGCAAGAATCTGAACAATCAACCAATTCCAAACAGCAATCGGCCACCAATGCAAATCTGTCTGCTgttgcagtggcagtggcactggcagcagcatcagcatcggcagcatcggcagcagcagcatcagcagcagcagcatcagcagcgtcTGTGGCATCCACAGCAACatctgcatcagcatcagcagcacccTCTGCAGTTACGGTTACGGCTTCCACCTCGTCGTAG
Protein Sequence
MAAINTVSKSIHLPLTNLSAQRVLMCSASLGSEGSVTLQLRDASTLETADSTTPTPTTTSTSATAAAATTTTSHPIATSSLGNQTNGVTLLETSSSATSGITSALENALTVGYPDPEMLADVLGTIQTASLKNKHSNNNNNSNNTSIKRSNNNNNNINKSSSTAATILNNSGIHLNSPNKITITRRSASNKISVQTVSTSTNTTISSIGGSKTNYIKNCLIRSSSCSNTATNVTTLAQILSNSSTSSAASLLSQHNNNSNCSNSSNFSIASSVGSIGSVSSITSNTSSSSNCSSSNSNDSNSSIGQSLSFKSNGRNVAGIVAASTTSTSTAATGIGIVTVDNAPRKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECRADGCGKSYCDARSLRRHSENHHGCVPISESLSPTASTNGIGSIIGSSNSNGIGVATSSLSLSPATASGDASSPDGATCIRTYISTGSSIVDAATGIALSDEQIRAMNLPIKTGVTLLSPTTSTCSTTSSTASSVSCSTSGNVNGSSVVASSPTITLCDGATLEAEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTETAQVSARPRTWNMQLLNNVQNVTLTVDDGTELVASASSPPVEVKDDELGQQQQLVTAINPHLLNIVKVDKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKRSEKKDSGGPPLQTASIGVRALIEEKIISKRKDINKGAFAVPAPPSSAVNSGVVSCNNNNNNNSSSNNNNNRNCNLRRSISDLESFLSPKSNANSSLSQALATTCSSTTTTAVLPAATTIKSSSGLSIQQIGLPQSIEIFSGGQRQPKTLSLGSGANTITITTNNVPTTTTMSALSALKGASSISSVSGNADPKDSTLIELLKRGTRIAVTSKKAQNTSTNLLLSNAANAELIGNGVQAANSRQIITNNNRTVIIPSDVHVVSTKSNKVSSNGANNANSISLPDGTPLSLTIGGNQESIGPSSISGGVNGVYAVTYTTNTDAVDLFGSAEVFNVSDTEMLLQTVDTMELLNNEEENEDEGHKQSEHSENFPLLSNVEDDVLIKLEPESGTPSTNTNASQTTTPLPTFQQFHSKELIMQNSSQIQAIANMRGGVLSSPLHSPLAYPTPPSSHENVAQSSPFIEDAAAQFVDANHTFFEDKTDFSHVYFKTDDDCMQQQQLSENDNEKILKLKTVLEESAFDASIKVEDLLNGTECVAECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLSSEQLAENIIDLYYLPGLGLQSQMMSNSDDPLLSSSPRDFGLQRQVVHATSSTVPSMEQLQSSGIMFAHQQQLLQPQQQQDQQPQLQPQQQQQQLQIGQQPQQQQQSDFMLSNFTPVSCQTQYLDANQQSMTMQPLNSLLQPLLFGSNNNGNNNNNSNSIDKQQEFGTLLQTTNGQTSALDASLIFACGDGIKSNSNNNKSLIANLPAAAPVVTPTPSFSNLQPLSNQTNSILKRRLRSNGAQDVHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGNGLYNNVRKQVGQNMFDVFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPSCKPLEEAIKETMSADMMWDPSVQIDEKILMRYIDLSKSSAVPMGSHSEEVALQALLEAKGNSAAAVLTLLQTQSSAFQMKWTTYELEQFLRGLERHGKDFGKIASELRTKTSGECVQMYYFWKKLCVDYKVSHLKMEPVPPSTPVVEQKPYVCEIADCSASFSSKAALHGHVRIHAYGRNANNSNNSNNNNNNNQHATAISANNSNNIHHSSSNSNNNTNNSNACAPQPSSNSNQCISATITATSTVAHTNGSNSNNTNTNANNNNSNNNNNSINSNISNVTGTSINTTLLSAAAATTSTATKDSNSNNSNIAKDTEFPCKVCGKVFNKVKSRSAHMKTHRVQESEQSTNSKQQSATNANLSAVAVAVALAAASASAASAAAASAAAASAASVASTATSASASAAPSAVTVTASTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00485798;
90% Identity
iTF_00593355;
80% Identity
iTF_00560536;