Dnig011245.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- lag-1
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000579.1:23516-26945[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 1e+04 -3.3 0.0 85 98 192 205 182 213 0.75 2 2 9.3e-43 6.2e-39 133.0 0.0 1 123 227 355 227 355 0.90
Sequence Information
- Coding Sequence
- ATGTTGGTGCCGTCAATAGAGTTCGACTCGAAGATTATGCTGGAATACTTGAAGAATCCGAAAAAGTACGATTGTgtaatttccattttccacGCCAAAGTCGCCCAAAAATCGTATGGCAATGAGAAAAGgtttttttgtCCACCTCCATGTGTCTACCTCATTGGCGAAGGTTGGAAGTTGCGTAAGGCGCGGACGGAAATTCTGATACCGGAAGAGATTCGTCAAAGGGTTCGGCGCACCACTGACTCGGAGCAGTGCGCAATAATTGCGGGCacgtcacaacaacaacaacactacgCGTCCAACGTCAGCGTAATGTCCGAGTTGTGCTCATTTATTGGAATTGGCGGTGCGCCGGAACCCGACAAGCTAATGCTCGATTTCTCCAAAGGCcaGGATTTTTCGGCCGCAAAATCTCTGTTTATAAGTGATTTGGATAagcgaaaatatttttcgctAAAggtcaactttttttatgacCTCGCCAATGGTTATTCGGTGAGCGATGTAGGCAACTTCGAATCGCAGCGAATCAAAGTCATCTCAAAGCCGGCCAAAAGGAAACAGTCGATCAAAACTAATgactgcaaatatttgtgcatatcCGGTGGGACAAagGTTGCATTATTCAATCGCCTACGCTCCCAGAACGTCTCGACACGATACCTGCATAccgaaaatggaaaattcaaTGCGAACGCACGAAAATGGGGCGCATTTACTATTCACTTGGtTGATATGCAAGACGAACTGACGCAAAACGACCCAAATATGGCGCAGTTTTATGCGGTGGAAGGCTATGTGTCCTACGGAAATGTTGTAAAGCTCATCGATGGTGTCACCGGGCTGGCGCTTCCGCCAatgaaaatTCGAAAAGTGGAGAAGAATATGGTCGTATTGGATGGTGGGCAAAGCGAACCAGTTAGCCAATTGCACAAATGCGCTTTTCAAATGCTTGACAATGAATTTTCGTATTTATGTTTGAACAACGATAGTATCGTCGAGTGTACAGCTCAACCTCAAGGCGCCGCCTTTCATACGTGTAGCGACGGCGCCGCGTGGACAATTATTTCGACGGAAGTGACTGAATACCGGTTCTATGAGGCAATTTCACTGACAGTCAAACCAGTCACACCAGTGCCTATTATTAATGGAATGAAGTTGGCCGCCAGCGGCACCCACGTTGCACATCTCTACCTTGAAGGTTGTAATTTCAGTTCGGCGTTGACGGTTTGGCTGGGCGCTACTCCTATTGAGACGCTAGTCAGCTCATCACAAATGATTCGGTGCCCGTTGCCACCACTCTCACAGTTGGATCGTCAGAGTGCTCGTCCTGTGACTGATCCGTCGTCTGAGCCGAATTCTATTGAATTTCCGATATCTTTGGTCCGGCGGGAGGACGGACTTATTTACGGTACAACCGCTGCAGTCACGTATTCGTATCCGCGCAACGTCGCGGCCACAGAGCCGGACGCGGACGAGTTTGCCGTCCCTACCCGGGGATTGTTAACTTAG
- Protein Sequence
- MLVPSIEFDSKIMLEYLKNPKKYDCVISIFHAKVAQKSYGNEKRFFCPPPCVYLIGEGWKLRKARTEILIPEEIRQRVRRTTDSEQCAIIAGTSQQQQHYASNVSVMSELCSFIGIGGAPEPDKLMLDFSKGQDFSAAKSLFISDLDKRKYFSLKVNFFYDLANGYSVSDVGNFESQRIKVISKPAKRKQSIKTNDCKYLCISGGTKVALFNRLRSQNVSTRYLHTENGKFNANARKWGAFTIHLVDMQDELTQNDPNMAQFYAVEGYVSYGNVVKLIDGVTGLALPPMKIRKVEKNMVVLDGGQSEPVSQLHKCAFQMLDNEFSYLCLNNDSIVECTAQPQGAAFHTCSDGAAWTIISTEVTEYRFYEAISLTVKPVTPVPIINGMKLAASGTHVAHLYLEGCNFSSALTVWLGATPIETLVSSSQMIRCPLPPLSQLDRQSARPVTDPSSEPNSIEFPISLVRREDGLIYGTTAAVTYSYPRNVAATEPDADEFAVPTRGLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -