Dnig013919.1
Basic Information
- Insect
- Drosophila nigricruria
- Gene Symbol
- stc
- Assembly
- GCA_037075265.1
- Location
- JBAMCI010000196.1:1613124-1616501[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+04 -3.6 0.5 15 18 350 353 349 354 0.79 2 15 2 1.9e+04 -4.1 1.6 15 19 377 381 376 381 0.81 3 15 0.056 5.4e+02 0.9 2.0 4 11 410 417 409 418 0.90 4 15 5.8e-07 0.0056 16.8 15.1 1 19 422 439 422 439 0.93 5 15 1.7 1.7e+04 -3.9 0.9 6 10 465 469 464 469 0.88 6 15 6.7e-08 0.00066 19.8 11.8 1 18 475 492 475 493 0.98 7 15 1.7 1.6e+04 -3.9 1.5 7 13 497 503 497 504 0.75 8 15 2e-09 1.9e-05 24.7 12.9 1 19 533 551 533 551 0.98 9 15 2.3e-05 0.23 11.6 17.0 4 19 599 614 592 614 0.88 10 15 0.057 5.6e+02 0.8 11.6 1 11 654 664 654 676 0.79 11 15 2.8e-10 2.7e-06 27.4 15.1 1 18 681 698 681 699 0.97 12 15 2 1.9e+04 -4.3 1.2 6 10 728 732 728 732 0.88 13 15 2 1.9e+04 -6.7 9.7 10 18 746 755 736 756 0.80 14 15 5.8e-08 0.00056 20.0 13.7 1 16 792 807 792 817 0.94 15 15 4.6e-08 0.00044 20.3 13.2 1 19 824 843 824 843 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGtattggcagcagcagcaacaacagcagcagcagcagccgccgcagcagcagccacagccacaacaacagctaacAAATGGAGCGGGCGATTCGCCTGGCTCGAATGgccacaataataataattatgtaaattttaatcaatttattagTCAACACAATTTGGCCAGCTCCAGTTACAAcgtgggcggcggcggcggcgcctTTGGGCTAACGCctagcagcagcggcggtggcggtTCCAATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACTGTTACAATGCAGCTGGCGCAGCTGTTGCTTATCCCGTTGCCTATGCAAATCCTTATACATCCTTTGGCCCAAATCCATTTGCCGCTCCGTCGGCTGGCTACGACTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAATTTGTGCCGAATTTCGCTAAGCTCAGTttaacagcggcagcagcagcgccagcaacagAGCATGCCTCTGTTAAAACacataacagcaacaacaacaacaacactgccaatggagtagcagcagcaacaacagcagctgtaaACTCGTCTCAGCAGCCACATCGCTCAGAGCACAGGCAAGCGAAGTCtcaaggcagcagcagcagcggtggcggcagcggcggcggcggtaaCAACAGTCGCCAGCAGCGTCGCAACGACTATCGTGAGGAGCGCAATGAGGAGCGCTATGAGCGCGGCAAAAAGCCGCAGAAACAGCAACGTTACGATAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGTAATCGTGATCGAATCAATGGCTATCCACGTGCCGCCGAGGAGCTggacaccagcaacagcaatgacaGTGCGCAGACCTCAcctgagaagcagcagcatcaacaacagcagcaaatatCGCCCCGGCGCGCACCTGACCTAGAGAAGCTGTCGCAGCGTGAGAAGCTAATGCGAGACATTGAGCAGCGTCGGCTCGAGTGCCTTGTTTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGTCAGAATTGTTATCACGTGCTGCACCTCAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCGAACGAGGGCTGGCGCTGCCCGGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGCTCAAGAATCCGCCGTTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGCTGTGCTGCCGCGTCGAGGGTTGCAGTCATGCGTGCACCTTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCGAACGTCAATCGCAGCTGTGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCATGAAACAGCCGCTCCAATGCGAAGCCATTTGCGATAAGCTCTTGAACTGTGGCGAGCATCGCTGCCAGCTGCCCTGCCATGTGGGCAAGTGCGAGGCGTGTGCGGAGCAAGTGCAGCAGAACTGCCATTGCGGCAAGCAGCAGCGCGATGTGCTGTGCACTCGGGAGACCCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGTGGCAAGCCTCTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACTAGCTGCCCCTGCGGCAAACTGCCTGTGCCGGCGTCACAGCGTAGCAGCTGCCTTGATCCGGTGCCCACGTGCGAGGGCACGTGCAGCAAGACGTTGCGCTGCGGCAAGCCAGCGCATCCACATCAATGCGCCAGCAAATGCCATCTGGGTCAGTGTCCACCCTGCCCGAAGCAGACGGCTGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCGACACGAGCGGACGACGCACGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGCCCCTTGCCCTGCAACCGAACGCTGAGCTGTGGGCGTCACAAGTGCGATCAGCCCTGTCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGTGGTGCCGAGGTCATCTATCCTCCGGTGCCCTGCGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGTTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGTCATGGCAATCACGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGTTTCAGCTGTGGCTTCGCCTGCGGCAAGCCGCTGTCCTGCGGCCGACACAAGTGCATCAGGCCCTGCCACGAGGGCGATTGCCAGCAGGCGGGTGAGCTGTGCCGTCAGAGCTGCACCAAGCCGCGTCTGTTGTGCGGCCACAAATGTGCCGCTGTCTGCCACGAGGGCGACTGCCCGGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAATGCGAGTGCGGCAATCGCAAACAGAATCGCAGCTGCCAGGAGCTGGCGCGCGAGCATAGTCGCATTGCGACCGCTCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAGATTCTGGCacccaacaaaaacaacaagtcTAATAAGACTTTGGACTGCAATGATGAGTGTCGTCTGTTGGAGCGCAATCGTCGTTTGGCCATTGGCCTGCAGTCACGTAATCCGGATGCGCAGCTGAAGTCGCTGACTAAGTACTCGGAGTTCTTGCGTGGCTTTGCCAAACGTAATCCGGTGCTAACGAAGAGCGTATATGAAACGCTCAGCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGCGGAGTCACTCCTTTCCCACCATGAATCGCGAGAAGCGGCAGCTGGTGCATGAGCTGTGTGAAGTATTTGGCGTGGAGTCTGTCTCCTATGACAAGGAGCCCAATCGTAATGTGGTGGCGACGGCGCACAAGGAGCGCTGTTGGCTGCCGGCTACGAGCATCATGGAGGTGCTGGCACGTGAGTCCGGACAACGTCGCGTTCCCGTGCCCAGCAACAATGCGTGGAGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQQQQQQPPQQQPQPQQQLTNGAGDSPGSNGHNNNNYVNFNQFISQHNLASSSYNVGGGGGAFGLTPSSSGGGGSNLYAPHFYGNQNGDCYNAAGAAVAYPVAYANPYTSFGPNPFAAPSAGYDFSASKLQATAPEFVPNFAKLSLTAAAAAPATEHASVKTHNSNNNNNTANGVAAATTAAVNSSQQPHRSEHRQAKSQGSSSSGGGSGGGGNNSRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQQQQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQLPCHVGKCEACAEQVQQNCHCGKQQRDVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPASQRSSCLDPVPTCEGTCSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFACGKPLSCGRHKCIRPCHEGDCQQAGELCRQSCTKPRLLCGHKCAAVCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- iTF_00587084;
- 80% Identity
- -