Basic Information

Insect: Drosophila neotestacea
Gene Symbol: stc
Assembly: GCA_035044365.1
Location: JAWNMD010000715.1:212197-216122[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.4 1.4e+04 -3.6 0.5 15 18 336 339 335 340 0.79

2 17 1.9 2e+04 -4.1 1.6 15 19 363 367 362 367 0.81

3 17 0.055 5.6e+02 0.9 2.0 4 11 396 403 395 404 0.90

4 17 5.7e-07 0.0058 16.8 15.1 1 19 408 425 408 425 0.93

5 17 1.7 1.7e+04 -3.9 0.9 6 10 451 455 450 455 0.88

6 17 6.5e-08 0.00066 19.8 13.8 1 18 461 478 461 479 0.98

7 17 1.7 1.7e+04 -3.9 1.5 7 13 483 489 483 490 0.75

8 17 2e-09 2e-05 24.7 12.9 1 19 519 537 519 537 0.98

9 17 1.1 1.1e+04 -3.3 0.5 5 10 567 572 567 572 0.90

10 17 0.00014 1.4 9.2 16.6 4 19 585 600 578 600 0.86

11 17 0.0077 78 3.6 8.0 1 11 640 650 640 651 0.96

12 17 0.86 8.8e+03 -2.9 0.5 4 10 655 661 654 661 0.86

13 17 2.7e-10 2.8e-06 27.4 15.1 1 18 667 684 667 685 0.97

14 17 1.6 1.7e+04 -3.8 0.9 6 10 714 718 714 719 0.81

15 17 2 2e+04 -9.0 11.1 10 18 732 741 721 742 0.72

16 17 2e-07 0.002 18.3 13.3 1 16 778 793 778 803 0.94

17 17 2.4e-05 0.24 11.6 13.7 1 19 810 829 810 829 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.4	1.4e+04	-3.6	0.5	15	18	336	339	335	340	0.79
2	17	1.9	2e+04	-4.1	1.6	15	19	363	367	362	367	0.81
3	17	0.055	5.6e+02	0.9	2.0	4	11	396	403	395	404	0.90
4	17	5.7e-07	0.0058	16.8	15.1	1	19	408	425	408	425	0.93
5	17	1.7	1.7e+04	-3.9	0.9	6	10	451	455	450	455	0.88
6	17	6.5e-08	0.00066	19.8	13.8	1	18	461	478	461	479	0.98
7	17	1.7	1.7e+04	-3.9	1.5	7	13	483	489	483	490	0.75
8	17	2e-09	2e-05	24.7	12.9	1	19	519	537	519	537	0.98
9	17	1.1	1.1e+04	-3.3	0.5	5	10	567	572	567	572	0.90
10	17	0.00014	1.4	9.2	16.6	4	19	585	600	578	600	0.86
11	17	0.0077	78	3.6	8.0	1	11	640	650	640	651	0.96
12	17	0.86	8.8e+03	-2.9	0.5	4	10	655	661	654	661	0.86
13	17	2.7e-10	2.8e-06	27.4	15.1	1	18	667	684	667	685	0.97
14	17	1.6	1.7e+04	-3.8	0.9	6	10	714	718	714	719	0.81
15	17	2	2e+04	-9.0	11.1	10	18	732	741	721	742	0.72
16	17	2e-07	0.002	18.3	13.3	1	16	778	793	778	803	0.94
17	17	2.4e-05	0.24	11.6	13.7	1	19	810	829	810	829	0.96

Sequence Information

Coding Sequence: ATGGCCGAGtattggcagcaacaacaagagcagcgacagcaacaacaacagctaattACTAACGGATCAGGCGGCGTTCCAGCCAATGGGGATGAGTCAGCATCATCTGGctctggcaacaacaataacaactatgtaaattttaatcagTTTATTTCGCAACATAATCTGGCCACCTCCAATGTGCCTTACAATATTGGAGGCGGCGGTGGTGCCTTTGGACTGACGTCCTCGTCCTCtggcagcaacaccaacaactttTCTGGCCCTTTATTTGGTTATCCGAATGGCGAAGGGGGAGGATCGAGCAACAACTATGCAGCATCAACTGCTTATCCCAATCTGTACTCACCTTTTGGCAATAATCCCTTTGCCTCCGCAAGTGGCTTTGATTTCAGCACTTCCAAGCTGCAGGCATCGGCACCTGAATTTGTGCCCAACTTTGCCAAGCTCAGTCTCGAAACAACAATAGACTCatccaacaaaaataataacaacagcagcaacactgcCATTCAGTCAAACAGTGAACAAGTCAACGAGGCGTCAACAACTaacaatcatcatcatcaacagcaacaacaacagcaacagcaacatcaaagGTTACCCAAACCTCATGGCACTAATAGTCGTCAGCAGCGAAGAAATGATTACAGAGAGGATCGAATTGAACGTAATGAGGATCGTTATGATCGCAAGAAGCCACAGAAGCAACAGCGCTACGACAATCATCGGAGCAATAAAAGACGCGATGACTGGAATCGCAATCGGGATCGAATTAATGGTTATCCACGTGCCACCGAGGAACTggacaccagcaacagcaacgataGTGCACATCCCTCACCTGAGaagcaaaaacagcagcaaatctCTCCGAGACGTGCTCCAGATAATGAAAAGTTGTCGCAACGTGAGAAACTCATGCGAGATATTGAACAAAGGCGATTGGAGTGTTTGGTGTGTGTGGAACAGATCAAGGCTCATCATGGCACTTGGTCGTGTCAAAACTGTTATCATGTCCTTCATCTTAAGTGCACCATCACTTGGGCAAGCAGCTCCAAGTCAGCAGAGGGCTGGAGATGTCCAGCCTGTCAAAATGTGCTGCAGGAGCTACCACGTGAATATCTCTGCTTCTGTGGCAAGCTTAAGAACCCTCCATTGACTCGCACCGAATTGGCTCATAGCTGTGGAGAACTTTGCTGTCGTGTTGAGGGTTGCAGTCATGCTTGCACCTTACTCTGTCATCCGGGTCCATGTCCGCCGTGCCAGGCAAACGTGAGTCGCAGTTGCGGCTGTGGACGCACCAATAAGCTGATGCAGTGTGCCATGAAGCAGACACTGCAGTGCGAGGCCATTTGCGATAAGCTGCTCAACTGCAGCGAGCATCGTTGCCAGCAGATTTGTCATGCCGGCAAGTGTGAACCTTGCGGGGAGCAAGTGCAGCAGAATTGCCATTGTGGCAAGCAGCAGCGAGAGGTGCTATGCACCAGGGAGAGTCAGGACAAGCGCAGCTATTCGTGCAAGGAATGCTGTGGCAAACCGTTGCCTTGTGGCAACCACAAGTGCAAGGATTCATGCCACGCTGGCGCCTGCCGTCCATGCAAATTGAGTCCTTCACAAATCACCAGCTGTCCGTGTGGAAAGCTTCCTGTGGCACCCGAGCAGCGGAGTAGTTGCCTTAATCCTGTGCCCACGTGTGAAGGCGTCTGTGGCAAGACATTGCGTTGTGGCAAGCCGGCGCATCCTCATCAGTGCACCACCAAGTGCCACTTGGGGCAATGTCCACCCTGCACGAAGCAAACTGCCGTCAAGTGCCGTTGTGGACACATGGATCAGATGATCAAGTGTCGGCAGCTTTCAACCCGAGCGGACGATGCTCGCTGCAAGCGACGTTGCACCAAAAAACGAAGCTGTGGCAAGCACAAGTGCAACGCTGAGTGTTGCATAGACATCGACCATGCCTGTCGGTTACCCTGTAATCGCACTTTGAGCTGTGGACGCCACAAATGCGATCAGCCGTGTCATCGTGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAACTCTATTGTGAGTGCGGTGCGGAAGTCATCTATCCACCTGTGCCTTGTGGCACCAAGAAACCCATTTGCAAGCGTCCCTGCTCTCGCACCCATCCCTGTGAGCATGTGCCTCAGCATAACTGCCATGCGGCAACCACTTGTCCACCCTGTATGATGTTCACCACGAAATGGTGTCATGGCAATCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGGCCAGCTTCAGCTGTGGCCTCGCCTGTGGCAAGCCGCTCGCCTGTGGACGCCACAAGTGCATCAAGTCCTGTCACGAAGGCGACTGTCAGCAGGCAGGTGAATTGTGCCGCCAAAGCTGCACCAAACCTCGCCTGCTCTGTGGTCACAAGTGTGCTGCCCCGTGTCATGAGAGCGATTGTCCAGAGACGCCGTGCAAGGAGCTTGTCGAGGTCCAATGCGAGTGTGGCAATCGCAAACAGAATCGCAGTTGTCAGGAACTGGCCAGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCTTCCTCCATGGCCGAGATGTCTCGAGGCAACTACATGGAACTCAGCGAGATTCTGGCGCCCACCAAAACtatcaaatcaaacaaaacGCTAGACTGCAATGACGAATGTCGTCTGCTGGAACGCAATCGTCGTTTGGCCATCGGTTTGCAATCGCGTAATCCGGACACACAATTAAAATCACTTACCAAGTACTCGGAGTTCACGCGCGGTTTTGCCAAGCGCAATCCGGCTTTAACCAAGAGCGTCTATGAAACATTAAGCGATTTGGTTAAGTTGGCCAAGGAGAGCAAGCAAAAGTCGAGGAGTCATTCATTTCCCACTATGAATCGTGAGAAGCGTCAATTGGTGCACGAACTGTGTGAAGTGTTTGGCGTGGAGTCTGTGTCCTACGATAAGGAGCCCAACCGGAATGTGGTTGCCACGGCACATAAGGAACGCTGTTGGTTGCCTGCCACAAGCATCATGGAGGTCCTGGCACGCGAATCCGGACAACGTCGCGTTCCAGTTCCCAATAACAATGCCTGGAGTCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQEQRQQQQQLITNGSGGVPANGDESASSGSGNNNNNYVNFNQFISQHNLATSNVPYNIGGGGGAFGLTSSSSGSNTNNFSGPLFGYPNGEGGGSSNNYAASTAYPNLYSPFGNNPFASASGFDFSTSKLQASAPEFVPNFAKLSLETTIDSSNKNNNNSSNTAIQSNSEQVNEASTTNNHHHQQQQQQQQQHQRLPKPHGTNSRQQRRNDYREDRIERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQKQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQTLQCEAICDKLLNCSEHRCQQICHAGKCEPCGEQVQQNCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKLPVAPEQRSSCLNPVPTCEGVCGKTLRCGKPAHPHQCTTKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACRLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHPCEHVPQHNCHAATTCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKSCHEGDCQQAGELCRQSCTKPRLLCGHKCAAPCHESDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNDECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPNNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00584110;
80% Identity: -