Dnen020965.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- stc
- Assembly
- GCA_005889595.1
- Location
- MRUE01031295.1:653-4030[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.095 1.1e+03 0.1 0.1 8 14 35 41 34 41 0.83 2 17 1.4 1.7e+04 -3.6 0.5 15 18 353 356 352 357 0.79 3 17 2 2.3e+04 -4.1 1.6 15 19 380 384 379 384 0.81 4 17 0.04 4.7e+02 1.3 1.7 4 11 413 420 412 423 0.91 5 17 4e-07 0.0047 17.3 15.0 3 19 426 442 425 442 0.94 6 17 1.4 1.7e+04 -3.6 1.1 6 10 468 472 467 472 0.89 7 17 8e-09 9.3e-05 22.7 12.1 1 18 478 495 478 496 0.98 8 17 2 2.3e+04 -6.2 4.1 7 13 500 506 500 507 0.77 9 17 2e-09 2.3e-05 24.7 12.9 1 19 536 554 536 554 0.98 10 17 0.55 6.4e+03 -2.3 0.6 5 10 584 589 584 589 0.95 11 17 2.9e-05 0.34 11.3 17.5 4 19 602 617 595 617 0.88 12 17 0.061 7.1e+02 0.7 11.7 1 11 657 667 657 679 0.79 13 17 2.8e-10 3.2e-06 27.4 15.1 1 18 684 701 684 702 0.97 14 17 2 2.3e+04 -4.4 1.2 6 10 731 735 731 735 0.88 15 17 2 2.3e+04 -8.0 9.6 10 18 749 758 738 759 0.74 16 17 7e-06 0.082 13.3 12.6 1 16 795 810 795 820 0.94 17 17 6.4e-07 0.0074 16.7 15.3 1 19 827 846 827 846 0.96
Sequence Information
- Coding Sequence
- ATGGACCAGTattggcaacgacaacaacagccacagttACAACAAGAACAGTTTGTTGCAAACGAATCAGGTGGCGATTTGGTAGCTCCAGATGAGTCCGCTGCTGTATGCCACGGtggaaacaataacaactatgtGAATTTCAATCAGTTCATCACGCAACATAATCTGGCAACTTCGAATCTAAGTTATAGTAATGGAGCCGGCGGTGCAGCCTTTGGACTAACGCCGAATAATAGCAACTATGGTGGActTCCATATGCACAACCCTTTTTCGGCTATCAAAATGGCGATGGAGCAGCCGGTGGCAGCGGGGGAATTGCATCTAGCAACAATTATCAAGAATCGTTAAGACATGCGTTGGATATCAATCCTTTTGCCTCAGCCAGCAGTTTTGATTTCAGCACTTCCAAGCTTCAGGCTTCGGCTCCAGAATTTGTGCCCACTTTTGCAAAGCTAAGTTTAAGTGCTTCCCCAGCAcctgcaacggcaacgggaTTGGGAGAACAGTCCCCTAGATCGAGCAGCACCAGCAATAAtcacaataaatgcaatattaatggcaacaacagcactgCCATAGTAAGTAGTGAAACAACtaaccatcatcatcatcaacagcagcccTACCAGCAGCATAATCAACAAGCCCAGCAGCCAAAGGCACATGGTTCTAACAGTCGCCAACAGCGACGCAACGATTACCGCGAGGATCGCATCGATCGCAATGATGATCGCTATGATCGCAAGAAGCCGCAGAAGCAACAGCGCTATGACAATCATAGAAGCAACAAACGACGCGACGACTGGAATCGTAATCGAGACCGCATCAATGGATATGCTCGTGCCAGCGAAGAGCTCGATACAAGCAATAGTAATGACAGCGCCCATCCATCACcggaaaagcaaaagcagcatcAAATATCGCCAAGACGCGCTGGCCCGGACAACGAGAAGTTGTCGCAACGCGAGAAACTTATGCGAGATATTGAGCAACGGCGTCTCGAGTGTCTGGTGTGTGTGGAACAAATCAAGCCGCATCATGGCACATGGTCCTGCCAGAATTGTTACCATGTGCTTCATCTCAAGTGTACAATTACGTGGGCCAGCAGCTCCAAGTCGGCGGAGGGCTGGCGCTGCCCAGCTTGTCAGAACGTTCTGCAGGAACTGCCGCGCGAGTATTTGTGCTTCTGTGGCAAGCTCAAAAATCCGCCCTTAACGCGCACCGAGTTAGCTCACAGTTGTGGGGAACTCTGCTGCCGTGCTGAGGGCTGCAACCATGCGTGCACTTTGCTATGCCATCCGGGTCCATGTCCGCCATGCCAGGCGAATGTGAGTCGCAGTTGTGGCTGCGGACGAAGCAGCAAACTGATGCAGTGCTCTATGAAGCAGCCGCTGCAATGCGAATCAATTTGCGACAAGCTACTCAATTGTGGCGAGCATCGATGTCAGCAACTCTGCCATGTGGGAAAATGCGAGAATTGCGCGGAAAAGGTGCAGCAGCATTGTCACTGCGGCAAGCAGCAGCGTGGCGTAATGTGCACTAAGGAGAGCCAGGACAGGCGTAGCTACTCGTGCAAGGAATGCTGCGGGAAACCGCTGCCCTGTGGCAATCACAAGTGCAAGGACTCGTGCCATGCCGGCGCCTGCCGACCTTGTAAGCTCAGCCCCATTCAGATTACTACTTGCCCTTGCGGTAAGCTGCCCGTTGCTGTTGAGCAGCGTGCCAGTTGCCTTGATCCAGTGCCCACCTGCGATAGCGTGTGTGGCAAGACATTACGCTGTGGCAAGCCTGCTCATCCTCATCAGTGCACGAGCAAATGCCATTTGGGACAATGTCCGCCGTGTCCCAAGCAGACGGCCGTCAAATGCCGCTGTGGACACATGGATCAAATGATCAAATGTCGGCAGCTGTCGACGCGAGCCGACGATGCGCGCTGCAAGCGACGTTGCACCAAGAAGCGCAGTTGCGGCAAGCACAAATGTAACGCCGAGTGCTGCATTGATCTTGATCACGCCTGCCCTTTGCCTTGCAATCGCACGTTGAGCTGTGGACGCCACAAGTGCGACCAGCCATGTCATCGCGGTAACTGTCCCCCCTGCTATCGAAGTAGTTTTGAGGAGCTCTATTGCGAGTGTGGTGCAGAAGTTATCTACCCACCGGTGCCTTGTGGCACCAAGAAACCCGTCTGCAAGCGACCCTGTTCTCGCACTCATGGATGCGAGCATGTACCTCAACACAATTGCCATGCGGCGGCTATTTGTCCGCCATGCATGATGTTCACGACCAAATGGTGTCACGGCAATCATGAGCAGCGCAAGACCATACCTTGCTCGCAGCTTAGCTTTAGTTGTGGTCTAGCTTGCGGAAAGCCACTTGCCTGCGGACGCCACAAATGTATAAGACCATGTCACGAAGACGATTGTCAGCAAGCTGGTGAATTGTGCCGCCAAAGCTGTACCAAGCCACGTGTGCTTTGTGGTCACAAATGTGCTGCACCGTGCCATGAAGGTAGTTGCCCAGAGACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGTGAGTGTGGAAACCGGAAGCAGAACCGCAGTTGTCAAGAGCTGGCCAGAGAGCACAGTCGGATTGCTACAGCCCAGTTGGCTTCGTCAATGGCTGAAATGTCTCGTGGTAACTACATGGAACTTAGCGAAATTTTGGCTCCAGGGAAAGcaagcaaatcaaacaaaacATTGGACTGCAATGAAGAGTGCCGCCTATTAGAACGCAATCGTCGGTTGGCTATCGGTTTGCAGTCACGCAACCCGGATACACAGTTAAAGTCACTCACCAAGTACTCGGAATTCACTCGTGGATTCGCCAAGCGAAATCCAGCTTTGACCAAGAGCGTCTATGAAACGTTAAGCGATTTAGTAAAGTTAGCCAAGGAAAGCAAGCAGAAATCGAGAAGCCACTCATTTCCCACCATGAACCGCGAGAAGCGACAACTGGTCCACGAGCTATGTGAGGTGTTTGGCATTGAGTCCGTGTCTTATGACAAGGAGCCCAATCGCAATGTGGTTGCCACGGCGTGCAAGGAGCGTtGTTGGTTACCCGCCACTAGTATCATGGAGGTATTGGCACGTGAGTCAGGCCAACGCCGTGTTCCGGTGCCCAGTAATAACGCCTGGGGCCTGAAAAAGTAG
- Protein Sequence
- MDQYWQRQQQPQLQQEQFVANESGGDLVAPDESAAVCHGGNNNNYVNFNQFITQHNLATSNLSYSNGAGGAAFGLTPNNSNYGGLPYAQPFFGYQNGDGAAGGSGGIASSNNYQESLRHALDINPFASASSFDFSTSKLQASAPEFVPTFAKLSLSASPAPATATGLGEQSPRSSSTSNNHNKCNINGNNSTAIVSSETTNHHHHQQQPYQQHNQQAQQPKAHGSNSRQQRRNDYREDRIDRNDDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYARASEELDTSNSNDSAHPSPEKQKQHQISPRRAGPDNEKLSQREKLMRDIEQRRLECLVCVEQIKPHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRAEGCNHACTLLCHPGPCPPCQANVSRSCGCGRSSKLMQCSMKQPLQCESICDKLLNCGEHRCQQLCHVGKCENCAEKVQQHCHCGKQQRGVMCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPIQITTCPCGKLPVAVEQRASCLDPVPTCDSVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDLDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHVPQHNCHAAAICPPCMMFTTKWCHGNHEQRKTIPCSQLSFSCGLACGKPLACGRHKCIRPCHEDDCQQAGELCRQSCTKPRVLCGHKCAAPCHEGSCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPGKASKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATACKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- iTF_00554082;
- 80% Identity
- iTF_00554082;