Dnen002428.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- Hr39
- Assembly
- GCA_005889595.1
- Location
- MRUE01030225.1:914-3352[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-13 2.2e-09 37.6 0.1 206 238 3 35 1 47 0.92 2 3 0.13 9.9e+02 -0.8 0.0 104 132 36 63 33 71 0.84 3 3 5.1e-84 3.9e-80 270.6 0.4 183 408 84 300 79 300 0.96
Sequence Information
- Coding Sequence
- AACGCCAATCCCGATCTGATCGCCCATCTCTGCAATGTCGCCGATCATCGACTCTACAAGATTGTCAAATGGTGCAAGAGTCTGCCGCTCTTCAAGAACATCTCGGAAATCATGGATGTTGAACATCTCTGGCAATACACTGATGCTGAATTGGCACGCATCAATCAGCCGCTGTCTTCGTTCGCATCTGGCGGATCTTCGTCGAGCTCTGGCGGCGGATCGGGCACAGGCGGACATCACACTGCCAATGCACAACAGATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCATCCAATGGCGAGAACGCCAATCCCGATCTGATCGCCCATCTCTGCAATGTCGCCGATCATCGCCTCTACAAGATTGTCAAATGGTGCAAGAGTCTTCCGCTCTTCAAGAACATCTCGATTGACGATCAGATCTGCCTGCTAATCAATTCGTGGTGCGAGCTTCTGCTCTTCTCCTGCTGCTTTCGGTCCATTGATACGCCCGGCGAGATCAAGATGTCACAGGGTAGAAAGATTACGCTAGCTCAGGCAAAAACCAATGGCTTACAGGCTTGCATTGAGCGCATGTTGAATCTGACGGATCATTTGCGACGTCTACGCGTTGATCGCTATGAATATGTTGCCATGAAGGTAATCGTGTTGCTGCAGTCCGaTACCACGGAGCTGCATGAGGCGGTCAAGGTGCGCGAGTGCCAGGAAAAGGCGCTTCAAGGACTGCAGGCATATACACTGGCCCATTATCCCGATACGCCGTCCAAATTTGGGGAGCTATTGCTGCGCATTCCTGATCTACAGCGCACATGTCAGTTGGGCAAGGAGATGCTGACGATCAAGACCCGCGATGGTGCCGACTTCAACTTGTTGATGGAACTGCTGCGGGGAGAACATTGA
- Protein Sequence
- NANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISEIMDVEHLWQYTDAELARINQPLSSFASGGSSSSSGGGSGTGGHHTANAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00556553;
- 90% Identity
- iTF_00556553;
- 80% Identity
- iTF_00556553;