Dneo014475.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- dsx
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000018.1:236090-237226[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-25 2.9e-21 75.1 10.4 2 47 41 86 40 86 0.97 2 2 4 1.9e+04 -11.0 8.1 11 21 146 156 144 158 0.72
Sequence Information
- Coding Sequence
- ATGGTTTCGGATGAAAATTGGAATAGTGACACAATGTCCGATTCGGATATAATTGACTCGAAAAACGATGTTTGTGGTGGCGCTTCTAGTTCCAGTGGCAGTTCCATTTCACCGAGAACACCACCAAATTGTGCACGGTGTCGCAATCATGGTTTAAAGATCACATTGAAGGGACATAAGAGATATTGCAAATACCGTTATTGTACATGCGAGAAATGCCGTTTGACTGCCGATCGTCAAAGGGTTATGGCCTTACAAACGGCCCTACGTCGAGCTCAGGCCCAGGATGAGCAACGAGCTTTACATATACATGAAGTGCCGCCGCCTGCTCCAGCCACCCAGGCATTGTTGAGCCATCACAGTCATCATCATAGCCATCATCATGTGGCAGCCGCTGCAGCGGCTCATGTGCATCAAGTTCATGCGGCTGCTGCTCATGCCCATCATGCCCATACACATGGACATGATCATCATATGTCCACTGTGCCAACTCCCGCCCAATCTTTAGAGGGCTCCTGTGACTCATCATCGCCTTCACCTTCATCCACTTCTGGTGGCGGTGGCATTGGCGTGGGTCCTGGAGTTGGCAGTGGGGCAGCCTTATTGCCGATCTCAGTCTCAGTCAATCGAAAGAATGGCGCAAATGTGAACTTGGGTAAGTTTTAA
- Protein Sequence
- MVSDENWNSDTMSDSDIIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRALHIHEVPPPAPATQALLSHHSHHHSHHHVAAAAAAHVHQVHAAAAHAHHAHTHGHDHHMSTVPTPAQSLEGSCDSSSPSPSSTSGGGGIGVGPGVGSGAALLPISVSVNRKNGANVNLGKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00590988; iTF_00600337; iTF_00618432;
- 90% Identity
- iTF_00600337; iTF_00618432;
- 80% Identity
- -