Dneb001669.1
Basic Information
- Insect
- Drosophila nebulosa
- Gene Symbol
- dsx
- Assembly
- GCA_018150735.1
- Location
- JAECWO010000106.1:4709750-4710802[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-23 1.6e-19 69.5 10.0 2 47 41 86 40 86 0.97 2 2 2.4 7.3e+03 -3.0 0.4 4 9 278 283 277 288 0.67
Sequence Information
- Coding Sequence
- ATGGTTTCGGATGAGAACTGGAATACTGACAGCATGTCCGATTCGGATATAATTGACTCGAAAAGCGATGTTTGCGGTGGCGCCTCCAGCTCCAGTGGCAGTTCCATTTCAGCGCGAACACCCCCCAATTGTGTCCGGTGTAGCAATCACGGGCTAAAGATCACATTGAAGGGCCACAAGAGATATTGCAAGTATCGCTACTGCAGATGCGAGAAATGCCGATTAACCGCCGATCGCCAGCGGGTGATGGCTCTGCAGACGGCTCTGCGTCGAGCTCAAGTCCAGGATGAGCAGCGAGCCCTACATATACACGAAGTGCCGCCGCCGGGGCCCACCACTCAGCCCCATCCACTCACTCCACTGCTCAGCCATCACAGTCATCACCACAGTCACTATAGTCATGTGGCTGCCGCCGCTGCGGCTCATGTGCATCAGGTGCATGCGGCCGCTGACCATGCCCACCACGCCCATGTACATGCACATGGCCATCCTGGGCATGTCTCGGTGTCGCATCACCAGCAGCAGCAACATCAGCCCCAGCTTGGCCAGGTTGCCCATGCTCATCATGCCCATATGGCGGTCGCCGCCTCAGTGGTGCAACAGCATCAGCAGCAGCACCACCACCACCAACAACAGCAGCCCCACCAGTCCACACTACGATCTCCACCGCACAGAGAGCATGGAGCGGCCACCAGCAATGGCCCAAGTTCCAGTTCTCAGGCAGCAGCTGCCACTTCGAGCAGTGGAAGCAATGGAGCAGGTGGTGCCGCTGGTGCAGGTGGCAGTGGAGCTGGTGGAAGTGGAGCTGCTGGATCAGTTAGTGTCATCACCACATGTCAATGGTGCCAACACCCGCCCAATCGTTGGATGGCTCATGTGACTCATCCTCGCCATCCCCCTCATCCACTTCGGGTCGCGGTGGGGTGGACGTTGGCGTGGGCGCTGGTATTGCCAGTGGTGCATCTTTATTGCCGATTGGATTTGACGTTGGAACCACTGTATATGTATTTCATATATTCAAATCAGAGGTGGGCACAAAAGTTTGACAAATGA
- Protein Sequence
- MVSDENWNTDSMSDSDIIDSKSDVCGGASSSSGSSISARTPPNCVRCSNHGLKITLKGHKRYCKYRYCRCEKCRLTADRQRVMALQTALRRAQVQDEQRALHIHEVPPPGPTTQPHPLTPLLSHHSHHHSHYSHVAAAAAAHVHQVHAAADHAHHAHVHAHGHPGHVSVSHHQQQQHQPQLGQVAHAHHAHMAVAASVVQQHQQQHHHHQQQQPHQSTLRSPPHREHGAATSNGPSSSSQAAAATSSSGSNGAGGAAGAGGSGAGGSGAAGSVSVITTCQWCQHPPNRWMAHVTHPRHPPHPLRVAVGWTLAWALVLPVVHLYCRLDLTLEPLYMYFIYSNQRWAQKFDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -