Basic Information

Insect: Drosophila navojoa
Gene Symbol: stc
Assembly: GCA_001654015.2
Location: NW:18501-22264[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 8.8e+03 -3.7 0.5 15 18 362 365 361 366 0.79

2 14 2 1.2e+04 -4.1 1.6 15 19 389 393 388 393 0.81

3 14 0.056 3.5e+02 0.8 2.0 4 11 422 429 421 430 0.90

4 14 5.9e-07 0.0036 16.8 15.1 1 19 434 451 434 451 0.93

5 14 2.2e-08 0.00014 21.3 13.6 1 18 487 504 487 505 0.98

6 14 1.7 1e+04 -3.9 1.5 7 13 509 515 509 516 0.75

7 14 2e-09 1.2e-05 24.6 12.9 1 19 545 563 545 563 0.98

8 14 2.4e-05 0.15 11.6 17.0 4 19 611 626 604 626 0.88

9 14 0.062 3.8e+02 0.7 11.7 1 11 666 676 666 688 0.79

10 14 2.8e-10 1.7e-06 27.4 15.1 1 18 693 710 693 711 0.97

11 14 2 1.2e+04 -4.4 1.2 6 10 740 744 740 744 0.88

12 14 2 1.2e+04 -7.7 9.9 10 18 758 767 747 768 0.76

13 14 2e-07 0.0012 18.2 15.2 1 16 804 819 804 829 0.89

14 14 4.6e-08 0.00028 20.3 13.2 1 19 836 855 836 855 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	8.8e+03	-3.7	0.5	15	18	362	365	361	366	0.79
2	14	2	1.2e+04	-4.1	1.6	15	19	389	393	388	393	0.81
3	14	0.056	3.5e+02	0.8	2.0	4	11	422	429	421	430	0.90
4	14	5.9e-07	0.0036	16.8	15.1	1	19	434	451	434	451	0.93
5	14	2.2e-08	0.00014	21.3	13.6	1	18	487	504	487	505	0.98
6	14	1.7	1e+04	-3.9	1.5	7	13	509	515	509	516	0.75
7	14	2e-09	1.2e-05	24.6	12.9	1	19	545	563	545	563	0.98
8	14	2.4e-05	0.15	11.6	17.0	4	19	611	626	604	626	0.88
9	14	0.062	3.8e+02	0.7	11.7	1	11	666	676	666	688	0.79
10	14	2.8e-10	1.7e-06	27.4	15.1	1	18	693	710	693	711	0.97
11	14	2	1.2e+04	-4.4	1.2	6	10	740	744	740	744	0.88
12	14	2	1.2e+04	-7.7	9.9	10	18	758	767	747	768	0.76
13	14	2e-07	0.0012	18.2	15.2	1	16	804	819	804	829	0.89
14	14	4.6e-08	0.00028	20.3	13.2	1	19	836	855	836	855	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcagtcacagcaacagcagcagctgcctcagcagcagcagcaaccacaacagtTGTCCCAACAACTAACAAATGGAGCTGGAGATTCAACGTGCTCGAACACAGCCAATGGCCactctaataataataattatgtaaattttaatcaatttattagtCAACACAATTTGGCCAGTTCCGTTTATAATGTtagcggcggcggcgggggTGCCTTTGGCCTGACTCcaagcagcagcgccagcagcggctcTAATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACAGTTACAATGCAGCTGGCGCAGCGGTTGCCTATCCTGTGGTCTATCCAAATCCTTATACATCCTTCGGCAGCAATCcgtttgctgcttctgctgctgcctcgacTGGCTACGATTTCAGCGCTTCCAAGCTTCAGGCAACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTGAGTttaacagcggcagcaacagcgacagcaccGATGACAGAGAGTGCCTCTGTTAAAAatcatagcaacaacaacaacactgccACACAGCCAAACGGaggagaagcagcaacagcagcgtcgAGTGGGAATTCAGCTCAGCAACCACATCGATCAGAGTTTAGACAATCGAAGAGTCAAGCCAGCAATAGTGGGGGCGGCGGAGGCGGTAACAACGGCCGCCAGCAGCGACGTAACGACTATCGTGAGGAGCGCAATGAGGAGCGGTATGAGCGTGGCAAGAAGCCGCAGAAACAGCAACGTTACGATAATCATCGCAGCAATAAACGACGCGACGATTGGAATCGTAATCGTGATCGCATCAATGGCTATCCACGCGCCGCCGAGGAGTTGGAcactagcaacagcaacgacagtgCGCAGGCTTCGCCCGAGAAGCAACAAaatcaccagcagcaacaaatctCGCCTAGGCGCGCACCTGAACTGGAGAAGCTGTCACAGCGCGAGAAGCTAATGCGAGACATTGAGCAGCGCCGACTCGAGTGCCTTGTCTGCGTGGAACTGATCAAGGCCCATCACGGCACCTGGTCGTGCCAGAACTGTTATCACGTGCTGCATCTAAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCGAACGAGGGCTGGCGCTGTCCGGCCTGCCAGAATGTGCTGCAAGAGCTGCCGCGCGACTATCTCTGCTTCTGTGGCAAGCTCAAGAATCCGCCGTTGACGCGCAACGAATTGGCCCACAGCTGCGGCGAGCTCTGCTGTCGCGTCGAGGGTTGCAGCCATGCGTGCACCCTGCTTTGTCATCCGGGCCCGTGTCCGCCGTGCCAGGCTAACGTGACGcgcagctgcggctgtggtCGTACCTCCAAGATAATGCAGTGCGCCATgaagcagccgctgcagtGCGACGCCATTTGCGACAAGCTGCTGAACTGCGGCGAGCATCGCTGCCAGCAGCCCTGCCATGCGGGCAAGTGCGAGGCGTGCGCGGAGCAAGTGCAGCAGAACTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGGGAGACGCAGGACAAGCGGAGCTACTCGTGCAAGGAGTGCTGCGGCAAGCCCCTGCCGTGTGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGCCCCTGCAAGCTGAGTCCTACTCAAATCACCAGCTGTCCCTGTGGCAAGCTGCCCGTGCCGGCGTcacagcgcagcagctgcctcgaTCCGGTGCCCACGTGCGAGGGGACGTGCAACAAAACGCTGCGCTGCGGCAAGCCAGCGCATCCGCATCAGTGCGCCAGCAAGTGCCACCTGGGCCAGTGTCCGCCCTGCCCGAAGCAGACGGCTGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCGACGCGAGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGATATCGATCACGCCTGTCCATTGCCCTGCAATCGAACGCTGACCTGCGGACGGCACAAATGCGATCAACCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGTTTCGAGGAGCTCTATTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCCTGCGGCACCAAGAAGCCCGTCTGCAAGCGCCCCTGCTCGCGCACCCACGGCTGTGAGCATCCGCCTCAGCACAATTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGTCACGGCCAGCATGAGCAGCGCAAGACCATACCCTGCTCCCAAGCCAGTTTCAGCTGTGGCCTGGCCTGTGGCAAGCCGTTGCCCTGCGGCCGACACAAGTGCATTCGGCCCTGCCATGAGGGCGAGTGCCAGCAGGCGGGCGAGCAGTGCCGCCAGAGCTGCACCAAGCCGCGCCTGCTCTGCGGCCACAAATGCGCCGCCGTCTGTCATGAAGGCGACTGCCCCGAGACGCCTTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGAAAGCAGAATCGCAGCTGTCAGGAGCTGGCGCGCGAGCATAGTCGCATTGCCACCGCCCAGCTGGCGTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAAATTTTGGCgcccaacaaaaacaacaagtccAACAAAACCTTGGACTGCAATGAAGAGTGTCGCCTACTGGAGCGCAATCGTCGCTTGGCCATTGGCCTGCAGTCGCGCAATCCGGACACACAGTTGAAGCCGTTGACCAAGTACTCGGAATTCTTGCGTGGCTTTGCCAAGCGCAATCCGGCGCTAACGAAGAGCGTCTATGAAACGCTCACCGATCTAGTGAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGGAGTCACTCGTTTCCCACCATGAATCGTGAGAAGCGCCAGCTGGTGCATGAGCTGTGCGAGGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAATGTCGTTGCCACGGCGCACAAGGAACGCTGCTGGCTGCCGGCTACGAGCATCATGGAGGTGCTGGCACGTGAATCGGGGCAACGTCGCGTCCCAGTGCCCAGCAACAATGCTTGGGGCCTGAAGAAGTAG
Protein Sequence: MAEYWQQQQSQQQQQLPQQQQQPQQLSQQLTNGAGDSTCSNTANGHSNNNNYVNFNQFISQHNLASSVYNVSGGGGGAFGLTPSSSASSGSNLYAPHFYGNQNGDSYNAAGAAVAYPVVYPNPYTSFGSNPFAASAAASTGYDFSASKLQATAPEFVPNFAKLSLTAAATATAPMTESASVKNHSNNNNTATQPNGGEAATAASSGNSAQQPHRSEFRQSKSQASNSGGGGGGNNGRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQASPEKQQNHQQQQISPRRAPELEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPRDYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVTRSCGCGRTSKIMQCAMKQPLQCDAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQNCHCGKQQREVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPASQRSSCLDPVPTCEGTCNKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLTCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHPPQHNCHAAATCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLPCGRHKCIRPCHEGECQQAGEQCRQSCTKPRLLCGHKCAAVCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKPLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00549946;
80% Identity: -