Dnav005718.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila navojoa
Gene Symbol
-
Assembly
GCA_001654015.2
Location
NW:404893-409646[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0094 0.54 10.3 1.2 1 23 220 242 220 242 0.96
2 26 0.036 2 8.5 1.9 1 23 248 270 248 270 0.97
3 26 0.037 2.1 8.5 0.2 2 23 302 323 302 323 0.95
4 26 0.013 0.76 9.8 1.3 1 23 400 423 400 423 0.93
5 26 4.1 2.3e+02 2.0 3.7 2 23 434 457 433 457 0.92
6 26 0.41 24 5.1 0.3 1 20 463 482 463 484 0.92
7 26 0.12 6.9 6.8 1.4 2 23 500 521 499 521 0.97
8 26 0.54 31 4.8 5.7 1 23 601 623 601 624 0.94
9 26 0.0004 0.023 14.6 0.0 1 22 633 654 633 654 0.96
10 26 0.39 23 5.2 1.3 1 23 663 685 663 686 0.92
11 26 0.00088 0.05 13.6 0.2 2 23 718 739 717 739 0.97
12 26 1.2e-05 0.00066 19.5 5.7 1 23 747 769 747 769 0.99
13 26 0.026 1.5 8.9 1.5 1 23 917 940 917 940 0.92
14 26 0.0024 0.14 12.2 1.3 1 22 947 968 947 968 0.96
15 26 0.58 33 4.7 0.4 1 23 977 1000 977 1000 0.87
16 26 9.2e-06 0.00053 19.8 2.4 1 23 1025 1047 1025 1047 0.98
17 26 0.00011 0.0066 16.3 0.9 1 23 1054 1076 1054 1076 0.98
18 26 0.019 1.1 9.4 0.0 2 21 1103 1122 1102 1123 0.94
19 26 0.0092 0.53 10.4 4.1 1 23 1168 1191 1168 1191 0.96
20 26 0.004 0.23 11.5 1.0 1 23 1228 1251 1228 1251 0.96
21 26 0.012 0.68 10.0 3.1 1 23 1279 1302 1279 1302 0.97
22 26 1.1e-05 0.00064 19.5 0.1 2 23 1330 1351 1329 1351 0.95
23 26 3.8e-05 0.0022 17.8 2.9 1 23 1357 1379 1357 1379 0.99
24 26 1.9e-06 0.00011 22.0 2.0 1 23 1385 1407 1385 1407 0.97
25 26 4.8e-08 2.7e-06 27.0 2.4 1 23 1413 1435 1413 1435 0.99
26 26 0.00015 0.0084 16.0 0.5 1 23 1441 1463 1441 1463 0.97

Sequence Information

Coding Sequence
ATGTTACCGACAGATATTTGTCGCACATGCACACTGCATGGTGATAGCTTGTTTCCGCTAACGACCCGCAcagataaatatgaaaataaaagtttaattgaaatgttacTTGAATTGACACAAAATGATCCCCTGCTGGAGCATACAGATGACAGTCTGCCGCAGAACTTGTGTAGTGGCTGCTTGCACAAGTTGGAGGCTGCGTATGCGTTTGTATTGCAAGCGCGCCACGCTCAAGAGCAATTGTTATTGCAGCTGCGCAAAGGCTTGCAGACACAGTGCTTGGATGAGATGCCTATAGACATTAACTTGCAGAACATCAAAACTGAGATGATCGTTGACATGCAACCGGCTAGCAAAGCCAAGAGTGAAGAAGATGAGACGGAGTCTGAAGAGAGGGAGCAAGACATGGCTGCAGTGGCTATTCCAGCCCTGAAATGGCAGCCAGACAGCGACAGTGAAAGTAATCGGAATGCTGCTGATGAACAGGATATTACCTTTAAGCCCAAGCAGCTGCGGCGCAGCGCACGTAAAGCCAAAACCTACACAGATAGCGAAAATGAAGCACCATCTATCGATGCGACTTCCTTGCCCATCAAACGGCGACGCGGTCGTCCAGCACGTCTTAAAACGGAGGGAATTAACGAAGAAGGACGGCATGTGTGCGAGGCTTGTGGAAAGAGCTTCTCCTGGTACCGTGACATGCAACGTCACTCGCGCATTCACTTCGAGCATCCAACCTTCGTGTGTGAGAGTTGTGGCAAGAGCTTCTTGCGCAAAGACAAATATATGTTTCATCTGCGTTCGCATGAAAAGCGTGCAACCAAATGTCAGGCCACGCAATTGAGCACCGAGTGGTGTTTTGCTGAACGTCTCTACAACTCCGGCCGCCTCAAGCAGGCGGAGTGCAAACTGTGCGGCTCGAAATACCAGCGTATAGGAGACCTGCGCGATCATATGACCGGCCATAAGAGCATCGAGACATTGTCTAAACTGAGTCTGGAGAGCGACGTTATCAGAGAACAGTTTActaaagagcagcaacaggttGACCTGGATCTgatcaaacaacaaatatgtgcTGACATTGCCAGAGGACGTGAGCAGCTGGACAAATACTGCGCCGTGGTTAACGCGTACGGATATGAGCTCTGTCTTAGCGACTCAGACGATGAAGCAGCTGATCAATCGCCTAAATACCAGTGTCGTCCATGCAACATCAACTTCACGCGCAAATATCGCCTTATGCGGCACACACTGGAGGAGCATACACAGGCGGAATCCGTAGTGTCTTGGCAACGCTGTGATGTCTGCCAAATTGGTTTTGTGTGTACTACAATGTTGGAGCAACATCAACGCACGCAGTGCCACAGCAAACTTAAGCGTTATAGTTGTCCCAACTGCCCAGGTAAATTTATCTGGCAGCAGAACCTGGAGCAGCACGCGTGCTCGCAACGTAGCAAGCAGCACAAcgagcaacgacaacaacagcaaaagcagtgCTGTCTCTGTGATATCCAATTGAGCACCATGTTCGAGTTACGTGCCCATTTGCTTAGCCATCAAGATGGGCGCAATGGGATACATCCGGAGCTGCAGGCGACCTTCTTTCGCACCTACTATCCCAACGGCCTTGACTGCAGCTTATCGGAGCTGAGCGCACGGATTGCCGCTGACTTTAAGGCGGAGGATTATGGGCGATACTTTAATGCCAAAACGAGCAACGGCGAGGAGCTTGATTTCTTTGCATCGGACTCAGACTTGAGTGATGCAGACCAGCTGAGTTGTAGCGGTAGGTTTCACATATGTTGCCTCTGTGGCGAAACGAAAAAGCGTCTCAGTCAATTGCTCGAGCATCAGCAAAGCCATCATAGTGAGGTGCAGGAAAAGTTCCCATACGTGTGTGATGACTGCGATTTGAGTTTTGTAGCTGAGGCTCTGCTCCAACGGCATCGCCGACGTGTCTGTGCTAAGCAGCATGCCAAGTACGAGTGCCAGCAGTGTAATCAGCGCTTTTACTGGCTTCCCAATTATGAGTTGCATGTGCAGCTGCATCACGAGACCCATCCTGAGCTGCAGACGGAATTTGTCGATGAACAGGAGCGGGAGTTGCGGATGAGAGGTAAACGCCAGTCCAGAGCGGCCAAGCTGCAGTGCGGCGAATGCGAAAAGGTGTTCATCTGGCCGAAGGATCTGACGCGTCATAAGCGGCTGCACCAGCCACAGGCTTTGGCACAATACCAATGCTTGCACTGCGACCGCAAGTTCCATCGCAAGGATGGGCTTAAGTCGCATATGCGTGTGCATAGCGAACAGCAGGCGAATGCTCCACTTGCCAGTGAACAAGCTCCATCCACCCTGCAGCGCATGTCCGTGGTGCTGACCCAACTATGTCGACCTAATGGCTGCAAGCAAATTCAATGCATGATATGCCTCTCGCAACACACCAAAATCTCTGATTTGCGCACTCATTTGCTCGACCATCAGTTTTCGGTCAAATTCGGAGAGGAGCGGAGCCAACCAGAAAGCATTGCGGGGATTTCACGTTTGCTGTATCCAGAACTACCCGAACCATTGGTGGAGCAGCAACTAATCGAACGCATCCAAAATGATCTGAGAAAAGGCGTGGAGCTCGAGAGATTCATTTCCATTACAAACGAGGCGGGCATTGAACTCAGCCTGGACAGCAGCGAAACAGAAACCGATTCGGACTCAGCCGAGACAGTCAAAAGCAACAGCGGGCAACTGTATAGCTGTGAGCTATGTCAGCTAAAGCTGACTCGCAAGCATCAGCTCTACGCCCatgagctggagcagcattCGTGGCAGCAAGCAACTCATGTTTGTAGCTACTGCCAGGCGAGATTCGTaaatgagcagctgctggagcatcACTATCGCACGCTCTGTCGCAACGCGCACCGACGTTTCATGTGTCGGAAATGCCCATTGCGTTTCCGCTGGCGCGAGAATATGAAGTTGCACTCGGACGTGGCGCACAACGAAGCTGGAGGCGAGCAATCGACCTTAGACATTAAGATGAACGGGACGCGCCTTTTACCCAGCGTGAGTTACAACTGCACGGAATGCAACCGTAGcttcaaaatgcaaaaggaTCTCACTCGACACACTCTGATGCATGCCCAGGAGTCGAGCATTTACCGTTGCCGCTGGTGTGCACGACGTTTCTATCGCCAGGCCAATCTTTTGCAGCACATTGAGCGTCACGGCATTAGCGCCGAACAACTGCCCTATGCTGAGGCACTGCTCAATGCTAGCCGCCATCCCCATGGACAGAAGTGTATCCAATGCAAGGTGTGTAATGTGACTTACCCCACCATAGCTGCGCTGCGCACCCATCTTCAATCTGCGCCAGCAGGCACACATCATGAGTATGGCTCGTTGCTAAACTACTCAATCACCAATCAGCTGGGATACGAGCTGCATCTGGAAGACTCGGAAACGGATGAGGATGGTAAGCCACCAGGCACGCCCACTCACTACACCTGCAGCATATGCCAGCTGCGCTGTGCGCGCAAGTTTGagctgcatcagcatcagcaagcGATGCATCGACTGGAACGGATAAACGAGGGCTGTGATGCCTGCATCTTTAAGAGTGTCTCAGCAGATCTCATTGCCTATCATCGGAGCGTCTTATGCTATAATACGGAGAAACACTTCAAATGCTCCAAGTGCGGCTACAAGTTTATGTGGGAAATGAATTTGGCGCAACATATGAAGCTGCAGCATCCCAGCAGCGATGGCAGCGAAACGCAGCTGAATGCAAGCTCGTTGCCTGCACAGGAGGTACCCAGCGCAGAGTGTCCGATTTTCCAGTGTGGACAGTGCCCTAGTAAATATAATCGCAAGGATCGTCTCACTGCACATGTAAAGAAATGTCACGCAGCGGGAACAAGTGGTCCTACGGCTGCTTCAGAGAAGCttataaaaaatgcaactggcgccaagcagcagaagagTTTCCTCTGCGCTTTCTGCGGCAAGGCGGTTAGCTCCTCATCCAATCTGATTATACACATACGTCGCCACACTGGCGAGAAGCCTTTTAAGTGTGACTATTGCGACATGGCTTTTCCACGTTCCTCCGATCTGCAGTGCCATCGACGCACTCACACGGGCGAGCGGCCGCACGTCTGCACTGTTTGCCAGAAGGGCTTTGCCCGATCctacaagctgcagcagcacatgcGCATCCACAATGGCGAGCGGCCATACAAGTGTACTTATTGTGACAAGAGTTTCACTCAGTCAAATGATCTGACTCTGCACATACGACGGCACACTGGCGAACGTCCCTATCAGTGCAATACGTGCGGCGAGCGTTTTATTCAGGGCACAGCCCTGAAGAATCATCGCCTGCAACATGGACACCACGACACGGAAGCTGACCAGGTCAAGGATATCTAA
Protein Sequence
MLPTDICRTCTLHGDSLFPLTTRTDKYENKSLIEMLLELTQNDPLLEHTDDSLPQNLCSGCLHKLEAAYAFVLQARHAQEQLLLQLRKGLQTQCLDEMPIDINLQNIKTEMIVDMQPASKAKSEEDETESEEREQDMAAVAIPALKWQPDSDSESNRNAADEQDITFKPKQLRRSARKAKTYTDSENEAPSIDATSLPIKRRRGRPARLKTEGINEEGRHVCEACGKSFSWYRDMQRHSRIHFEHPTFVCESCGKSFLRKDKYMFHLRSHEKRATKCQATQLSTEWCFAERLYNSGRLKQAECKLCGSKYQRIGDLRDHMTGHKSIETLSKLSLESDVIREQFTKEQQQVDLDLIKQQICADIARGREQLDKYCAVVNAYGYELCLSDSDDEAADQSPKYQCRPCNINFTRKYRLMRHTLEEHTQAESVVSWQRCDVCQIGFVCTTMLEQHQRTQCHSKLKRYSCPNCPGKFIWQQNLEQHACSQRSKQHNEQRQQQQKQCCLCDIQLSTMFELRAHLLSHQDGRNGIHPELQATFFRTYYPNGLDCSLSELSARIAADFKAEDYGRYFNAKTSNGEELDFFASDSDLSDADQLSCSGRFHICCLCGETKKRLSQLLEHQQSHHSEVQEKFPYVCDDCDLSFVAEALLQRHRRRVCAKQHAKYECQQCNQRFYWLPNYELHVQLHHETHPELQTEFVDEQERELRMRGKRQSRAAKLQCGECEKVFIWPKDLTRHKRLHQPQALAQYQCLHCDRKFHRKDGLKSHMRVHSEQQANAPLASEQAPSTLQRMSVVLTQLCRPNGCKQIQCMICLSQHTKISDLRTHLLDHQFSVKFGEERSQPESIAGISRLLYPELPEPLVEQQLIERIQNDLRKGVELERFISITNEAGIELSLDSSETETDSDSAETVKSNSGQLYSCELCQLKLTRKHQLYAHELEQHSWQQATHVCSYCQARFVNEQLLEHHYRTLCRNAHRRFMCRKCPLRFRWRENMKLHSDVAHNEAGGEQSTLDIKMNGTRLLPSVSYNCTECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRQANLLQHIERHGISAEQLPYAEALLNASRHPHGQKCIQCKVCNVTYPTIAALRTHLQSAPAGTHHEYGSLLNYSITNQLGYELHLEDSETDEDGKPPGTPTHYTCSICQLRCARKFELHQHQQAMHRLERINEGCDACIFKSVSADLIAYHRSVLCYNTEKHFKCSKCGYKFMWEMNLAQHMKLQHPSSDGSETQLNASSLPAQEVPSAECPIFQCGQCPSKYNRKDRLTAHVKKCHAAGTSGPTAASEKLIKNATGAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQHGHHDTEADQVKDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00509945;
90% Identity
iTF_00549680;
80% Identity
-