Dnav005445.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Drosophila navojoa
Gene Symbol
NFATC2_1
Assembly
GCA_001654015.2
Location
NW:107764-134964[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.9 9e+03 -4.1 1.6 15 58 52 93 50 104 0.68
2 5 4 1.2e+04 -6.5 3.7 60 68 241 249 226 264 0.46
3 5 2.7e-37 8.3e-34 116.4 0.8 1 168 306 465 306 466 0.97
4 5 0.74 2.3e+03 -2.1 0.0 47 73 485 511 477 529 0.79
5 5 1.5 4.6e+03 -3.1 2.7 105 121 723 739 702 759 0.45

Sequence Information

Coding Sequence
ATGCGCTTCACTTACAATCAGTATAAATACTACGAGTCCGGCTATCGTATTCCATCCAAAATGCACAATCTGAACCATCAtcatggcaatggcagtgtgggcaaaatcaacagcaacaacaacaacaacagcagccacggcagcagcggccacCACTACAGCAGCCATCACAGTCAtcacggcagcaacagcagcagcagcagcaacagcaatataaacacaaatccATATCAGCATCATTACAAAAGCAATTTTGGCATGCGTATGACCATGTCCACAAACTCAACGATGAGTCCTCGCATCCATCGCAAAGGCTTTCGCATACCATCGAAAAGACAGCCGGGCAAGGGACTGCCGGGCAAATTGCACACTATAGCCAGGACGGGCCCGGGGAAGCTAGTGCCGGGGAAACGAATACCACAGCGACCGCATCCGCCGCCCTGCGACAATTCCAATGACAGTGGCTTGGGATTCGATCAGCACACGGAGCTGCGCAATGGCACGGCCCCAGTTGCCGTCGATGCCAGGAGCAGCaaccccagcagcagcagcagcagcaacagcagtagtagcagcagcagttgtagcagcagcagcagcagcactggcCTCTCCGGCAGTGGACAGCATTCAAATCTGATAGTAAATAGTGTGACTGCAGGTGCggcaagcagcagctctttgcagcagcagcagcagcatcatcagccgcagcagcagcaacaacaacagcaacagcatccgcatcaacagcaacatcaacagcagcaacaacattcacCGCAGCAGCATTTAATACGCGCGATACCTGTTTCAAGATTCATTGGCACACGCGCCGTAACCCGCGTGGCCAACAAGCGACAGCCCACGACGCCGCTGAACAGCATCGCCAGCTCCAATGATAGCCATGTGCAGCTGGAGATCGTGTCGCAGCCGGAGCAACAGCATCGTGCACGCTACCAGACCGAGGGCAGCCGCGGCGCCGTCAAGGATCGCAGCGGCAACGGATTTCCGATTGTCCGGCTAACGGGCTACGATAAGCCCGCCGTGCTGCAGGTGTTCATCGGAACGGACATTGGACGGGTCGCGCCGCACATGTTCTATCAGGCGTGCAAGGTGGCTGGCAAGAATTCGACGCAGTGCAACGAGAAGAAGGTCGACGGCACCATGGTCATCGAGATTGACTTCAAGCCCGAAACGGACATGACCATCACCTGCGATTGCGTTGGCATCCTTAAGGAACGCAATGTCGACGTGGAGCATCGCTTTCCGGAGCATCTGGCccagaagaacaagaagaagtcAACACGTTGTCGCATGGTCTTTCGCACGCAGCTAACACGTGACGATGGCAGCACTGAAACGCTGCAGGTCTGCTCCAATCCCATCATATGCAgactTTTACAGACGCATTTGATCTGCACAGTGCCGCCATACCTGCATCAGAATATACTAAAGCCGGTCTCTGTCCAGGTGTCAATCATATCGAGCGGCAAGAAGAGCGAGCCCCACACCTTCACCTATACGCCCAAGGGCAGCTATACGACTTTGGCGGCGGCCAGCACGTTAAGTAGCACAATGCATAGCCAagATGTCGCCAGCTTCATGGACACGAGCAGTGCGCcggccagcagcaacggcgcCTGGGGCAGCGCCGGTGGCagtgcggctgttgttgccgccgctgctgccgctgctgccgctggcgcgGCCGGAGCCGGCGGCGTGGTGGAGACGAAGCATGAACTGGACCTGGGCATGATGCCGCCACCGATCACCACACAGATACCGATGGGACTGCGACGATCCTCGTTGTCGGGCGCCACGCCCATGATTACCGACCAGCAGCTGGTGCATCTGAGCGCCGATGCGGCGCTCAAGAGCGAGCTGCTGGACGAGAGCAGCTCGCTGAGTCCGCGCACAGCCGAGACGCTGCACTCGCCGGAGGCGCTCGATCCGTGCAGCCCCAATGCCCTGCAGTATCATGCGCACTATGCGCGCGAGGGCAGCCTGGACACGATCATGTACGATCAGTCGAACAGTATGCCCGGTTTTCCGGTGCCCGCCGCGGCCGCTGTTGACCTCGATCCCGCCTCGGTGGCCGTGGCCGTTGGGCTGGCCGTCAAGCACGAGAttatccagcagcagcagcagcagcagcagaaccaacagcagcagcaactggagcaactggagcagctggagcaacagcagcaacagcaacaacagcagcaacaacagtcgtcggcggcggcggccaaTGTGCACAAGTTCATCGACGATCTGACCAAATCGACGTCTGTGGTCAATAGCAACGGCACCAGTGAGCCGGCTCTGTTCACCAGCGCGTCGGACATCGACCACGCCCTCACCGACATACTGCAGCAGAAGGTGAGCGTGCtgacgcacacgcacacgcacacgcaccaGCACTCGAATGGAGCGGCCACAGCAGCGCCGGGTGTCCTCAAGCGCAGCCTctccatcagcagcagcaactcgaaCTCGAGCTCGCTGTCCGGCAGCGAAACGTCGCCGAATAGCTCGCCGATCACGCAGGACATCATCCTGAACTCGGAGCCGGCGGCAGCGTTGGGCGCCgggctgccgctgcagcagctggccacgGTGCCGGCGGCCGCGGCTGTGGCCAATGCCGGCGGTGCTCTGTCGACTGACATCATTATGAATCCGGCCGTATCGCCGTCGACCATACTCTGTTCGGCGAACGGAGCCGCCACGGCGGTGGTGGCCAACATTCTGGCGCCCCACCAGGTGACCATGGCCAATTCGATATTGAACAACATTGCCATGCAGCCGGAGCCGACGCGGCAGGATGCCGCCGTCGCTGCCCTGGCGCTGAGCAACATTATGATGAGTCCGCCGAATGCGGCCGCCGGCGTCAGTGTCGATGTGGGCGACACGTTGCCGCCCACGCCGGCCGTCATGCAGCCGGAGGTGGCGGCCACGGCCACCTCGACGGCGGTCAGTAACATGATCATCAAGGCGGCCGCCGATTTTATAGACacgcaggagcaggagcagcatcattatcaccaccatccacatccacatccgcagcaaccgcagcaggcAGCGAATGCGGCTGCCAGCGCTGGTGATCCACTCGTCAATCTGCTGCTGAACCACACGACACCGGAAACCGTGGTGGTCGAGGCGGCTGccgtcgccgctgccgccgccgccggctATCCAACGCTGTCCGGCGTCCATCTGCCGGTCGTGCCGCCCACACCACAAGAATCTCTCATTGTTGCGCTGGCCACTGAGAATGCGCTGCAGAAGTCTGTGGCCACCGCTGCCATTACCACCAACGGAGCGGTAATGACCCAGCAGGCAACGACGCccagcagcaccggcagcaTCCTGCCGGCAGCCGTGGGCGCTGtcgccgcagccgccgccgtcgccgtgcAGCCGCCCATACCACAGGAGCTGACATCAATGTCCGACCAGGACCTAATCAGTTATATCAATCCGAGCACCTTCGATCAGCttTAA
Protein Sequence
MRFTYNQYKYYESGYRIPSKMHNLNHHHGNGSVGKINSNNNNNSSHGSSGHHYSSHHSHHGSNSSSSSNSNINTNPYQHHYKSNFGMRMTMSTNSTMSPRIHRKGFRIPSKRQPGKGLPGKLHTIARTGPGKLVPGKRIPQRPHPPPCDNSNDSGLGFDQHTELRNGTAPVAVDARSSNPSSSSSSNSSSSSSSCSSSSSSTGLSGSGQHSNLIVNSVTAGAASSSSLQQQQQHHQPQQQQQQQQQHPHQQQHQQQQQHSPQQHLIRAIPVSRFIGTRAVTRVANKRQPTTPLNSIASSNDSHVQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLTGYDKPAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTMVIEIDFKPETDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTRDDGSTETLQVCSNPIICRLLQTHLICTVPPYLHQNILKPVSVQVSIISSGKKSEPHTFTYTPKGSYTTLAAASTLSSTMHSQDVASFMDTSSAPASSNGAWGSAGGSAAVVAAAAAAAAAGAAGAGGVVETKHELDLGMMPPPITTQIPMGLRRSSLSGATPMITDQQLVHLSADAALKSELLDESSSLSPRTAETLHSPEALDPCSPNALQYHAHYAREGSLDTIMYDQSNSMPGFPVPAAAAVDLDPASVAVAVGLAVKHEIIQQQQQQQQNQQQQQLEQLEQLEQQQQQQQQQQQQSSAAAANVHKFIDDLTKSTSVVNSNGTSEPALFTSASDIDHALTDILQQKVSVLTHTHTHTHQHSNGAATAAPGVLKRSLSISSSNSNSSSLSGSETSPNSSPITQDIILNSEPAAALGAGLPLQQLATVPAAAAVANAGGALSTDIIMNPAVSPSTILCSANGAATAVVANILAPHQVTMANSILNNIAMQPEPTRQDAAVAALALSNIMMSPPNAAAGVSVDVGDTLPPTPAVMQPEVAATATSTAVSNMIIKAAADFIDTQEQEQHHYHHHPHPHPQQPQQAANAAASAGDPLVNLLLNHTTPETVVVEAAAVAAAAAAGYPTLSGVHLPVVPPTPQESLIVALATENALQKSVATAAITTNGAVMTQQATTPSSTGSILPAAVGAVAAAAAVAVQPPIPQELTSMSDQDLISYINPSTFDQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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