Basic Information

Insect: Drosophila nasuta
Gene Symbol: bab2
Assembly: GCA_017165715.1
Location: Scf:4757-46994[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.3 7.4e+03 -3.6 0.8 2 13 365 376 364 378 0.79

2 2 1e-17 2.3e-14 52.4 0.0 1 43 736 779 736 781 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.3	7.4e+03	-3.6	0.8	2	13	365	376	364	378	0.79
2	2	1e-17	2.3e-14	52.4	0.0	1	43	736	779	736	781	0.95

Sequence Information

Coding Sequence: ATGGATATGACAAAGGACATCATGGACTTTGAACAGAAGCTCGACAGCGAGCAATACGAGCCAAATGATTACACAATGGTCAACATAGACATACCAAAGCAGCCAGAGCCGCAAACAGAAATGGCCTACGAAACGGCCAAGACAGAGGAGCGAGAGTTGGAAGAGACAACCACAACAACTCCAACAGCAAACACAGAGCAACCAGCAGAAGCTGGCGAAGATCAGCAAGAGGAGGAGCAGCAACCACAAGAGTTGAAGCTGAAGTTGGAACAGAAATTGTCACCCATTGTGAAGGAGGAAGCAATCACAACAGAAGAGAAACCAAATCGAATGAGAGCTGTGCTCAATGAGCAGCCACTGACGCCACCGCCACGTCCGCTCACCTCCAGCGAGGTCGTAGGTCACACCGACTCCGATGATCCCGAGTTGCGAGTCCAACTCACAGCGAAGAAATCCCGCTCTCTGCCTGTGTCCCCGCAGCCTTTGGTCTCGCACAATCTGTCGGCCATTGGACTCTTTGAGTTCGGACAACACAACAACAATAACAACAACAACAACAAAAAGTTGACAACAATAAGATCAACTGAGAAGCCAAAGCTTGGTCAGAAACTGTTTGCAGCTCCAACACAACGCAAATCCTCGCCAGTTGGTGGAGATAATCAACAGTTTTGTCTGCGCTGGAACAATTATCAATCGAATCTGACGAATGTGTTCGATGAACTGCTGCAAAATGAATCCTTTGTGGATGTGACGCTCGCCTGCGAAGGACACTCGATCAAGGCACACAAAATGGTTTTATCCGCTTGCTCTCCCTACTTTCAAGCGCTGTTCTACGATAATCCCTGCCAGCATCCGATTATCATTATGCGCGACGTCAACTGGAGTGATCTAAAAGCTCTCGTCGAGTTTATGTATAAAGGCGAGATTAATGTGTGCCAGGATCAAATTAATCCGTTGCTAAAAGTCGCTGAAACTCTAAAAATACGCGGCTTGGCTGAAGTGAGCGCAGGTTCGAGTTCTGGGAACAATGCTGGGATTGGAGGAACTTCGTTGCTGCCTGAGCAGCGGATGACTGTTTACGATGAGGATGATGATGAGGAACTCGCTGCCGCTGCTGCGATTATCAGAGACGAGGAGGATGACGATGAGCAGAAGCCGAAGCGAGCTCGCTTGCTGGCCAAACTCCAGGCGGAATCTGCGCTCGATCTCAATCAGCGTCAGCGCAAACGCTCCCGCGATGGCAGCTATGCCACGCCCAGTCCGCTGCCCTTGCCCCTGCCCCTGCGCTCGGAGTCGCCGCAGCAGCGAGCGGGAGTTACTCCTCAACCCTTGGCCATGACCACATCGACCATTGTGCGCAATCCGTTTGCCTCGCCCAATCCACAATCGCTGCAGGCGCATCTCTCCGGCAGCTCGTCGTCCGCCTCGAGCAGCTCCGGTGGTGGCTCCTCCACAGTTGGCGGTGCCAGCGGCAACTCGGCTGCCTCCTGCATTAGCTCCGGCTCCGCTGCTGCTGCAGCTGCTGCGTCGAATGCTTCTGCCGCTTCGGCTGCGGCTGTTGGCAGCTATCGTCCCAGCGCACGCAGCTGCTCCCCGCCTCCGCCACCCTCGGCCCACAGCAATGGCTCTGCCGCTGCCGGCGCCCTCTCCTCGCCCACTGGCAATCCATCGGCCTCGTCTAATGCGCAGTCGCAACTGCCTCCGCACATGGCCGCCGCTGTGGCCGCTGCTGCCCATCATGCCTCCGCCTCGGCTGTGGCGCCTCCGCCGCCTTCGTCGGCCTCCTCGATGCATCATCATGCTGCAGCTGCTGCAGCTCAGCAGCTGGCTGCTCAGCATCAGCTGGCGCATTCCCATGCAGCTATGGCCAGCGCCTTGGCTGCCGCTGGCGTCGGTGGAGCTGCTGCTCCTGGCAATGCGGCTGCTGCTGGCGGAGCTGTGGGCAATGCTGCATCCTCGGTGGGTGCTCATCATGACGACATGGAAATCAAACCGGAAATTGCTGAGATGATACGTGAAGAAGAGCGGGCCAAAATGATTGAGACCGGCGGACATGGCTGGATGGGTGCTCCTGCAACAGGCACATCTGTGGCGGACAGCTACCAATACCAATTGCAGTCGATGTGGCAAAAATGCTGGAACACTAACCAACAGAATCTGGTGCAACAGCTGCGCTTTCGTGAACGCGGCCCCCTCAAGTCTTGGCGCCCCGAAGCCATGGCAGAGGCCATCTTCAGTGTGCTAAAAGAGGGACTTTCGCTGTCGCAGGCTGCTCGCAAATATGACATCCCGTATCCGACATTCGTGCTCTATGCCAATCGTGTGCACAACATGCTGGGACCCTCACTTGATGGCGGCACTGATCCCCGACCCAAGGCACGTGGCCGACCGCAGCGCATCCTGCTCGGCATGTGGCCAGAGGAGCTAATTCGCAGCGTCATCAAGGCCGTGGTGTTCCGTGACTATCGCGAGATCAAGGAGGACATGGGTGCGCATCAGTATGCCAACGGACAGGCGCATGGTGCACACTTTGGATCTGGCAACTCGTCAGCAGCCGCCAATGGCTACCACAATGCGGCGGTCAAGATGGCCGCCCAGAACGCGGCGCTTGCACCGCCCGACAGCAGCAATCCTTTGAGCACCATGACCGAGACCCTGCGCCGTCAGATCCTCTCGCAGCAGCAGCCGCAGCAGTCGCCGCACGTGCAGTCGATGAACATGTACAAATCGCCAGCGTACTTGCAACGCTCGGAGATTGAGGATCAGGTGTCGGCTGCCGCCGCGGTGGCAGCGGCCAAGCATCAGCAGAACGAGCGACGTGGCACCGAGAATTTGCCCGACTTGAGCGCTCTGGGACTGATGGGATTGCCCGGCCTCAATGTGATGCCCTCGCAGCAGGCGCCGCATCAACGCGGAGCAGGCGGCGGCGGTGGCGGCGGCGGCAGCGGCGGACCAGGTGCTGCCATGCATCCCAGTGCCGCGAGCTATGCGCGAGAATTATCCCGAGAACGCGAGCGAGAGCGTGAGATGTCCAGGGATCGAGAACTCAAGGAGGCGATGCATGCCCGACAATATGGCAATCAGTCGCGTGGCTCAAACTCCTCGGCAGGCAGCAAATCGGCGTCGGGACACGGTGCATCATCGAGTCGACCGGGCGCCGCGTCGCCGTATTCCACGCACTACGCCAAGCATCAGAGCAAGGAGCAACAACAGCATCCGAATTATGCGTACAACAAGCGTTTCCTGGAGAGTCTGCCCGCGGGCATTGACTTCGAGGCTATTGCCAATGGGCTACTCCAAAAGTCGGTGAACAAGAGTCCGCGCTTCGAGGACTTCTTCCCCGGCCAGGACATGAGTGAACTCTTCGCCACCGCCGACGCCAACGCCGGAGCCGCAGCGGCGGCAGCTGCAGCAGCCGCGGCTTATGCGCCGTCGCAAGTGCGAGAATCGCCGCTGATGAAGATCAAGCTGGAGCAGCAGCAGGCCACCGAGCTGCCGCATGAGGATTGA
Protein Sequence: MDMTKDIMDFEQKLDSEQYEPNDYTMVNIDIPKQPEPQTEMAYETAKTEERELEETTTTTPTANTEQPAEAGEDQQEEEQQPQELKLKLEQKLSPIVKEEAITTEEKPNRMRAVLNEQPLTPPPRPLTSSEVVGHTDSDDPELRVQLTAKKSRSLPVSPQPLVSHNLSAIGLFEFGQHNNNNNNNNKKLTTIRSTEKPKLGQKLFAAPTQRKSSPVGGDNQQFCLRWNNYQSNLTNVFDELLQNESFVDVTLACEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVNWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGSSSGNNAGIGGTSLLPEQRMTVYDEDDDEELAAAAAIIRDEEDDDEQKPKRARLLAKLQAESALDLNQRQRKRSRDGSYATPSPLPLPLPLRSESPQQRAGVTPQPLAMTTSTIVRNPFASPNPQSLQAHLSGSSSSASSSSGGGSSTVGGASGNSAASCISSGSAAAAAAASNASAASAAAVGSYRPSARSCSPPPPPSAHSNGSAAAGALSSPTGNPSASSNAQSQLPPHMAAAVAAAAHHASASAVAPPPPSSASSMHHHAAAAAAQQLAAQHQLAHSHAAMASALAAAGVGGAAAPGNAAAAGGAVGNAASSVGAHHDDMEIKPEIAEMIREEERAKMIETGGHGWMGAPATGTSVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHGAHFGSGNSSAAANGYHNAAVKMAAQNAALAPPDSSNPLSTMTETLRRQILSQQQPQQSPHVQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAKHQQNERRGTENLPDLSALGLMGLPGLNVMPSQQAPHQRGAGGGGGGGGSGGPGAAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSAGSKSASGHGASSSRPGAASPYSTHYAKHQSKEQQQHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFATADANAGAAAAAAAAAAAYAPSQVRESPLMKIKLEQQQATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00522880;
90% Identity: iTF_00472287;
80% Identity: iTF_00553783;