Dalb005591.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila albomicans
Gene Symbol
bab2
Assembly
GCA_009650485.1
Location
NC:4632217-4674614[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4 7.3e+03 -3.6 0.8 2 13 365 376 364 378 0.79
2 2 1.4e-17 2.3e-14 52.4 0.0 1 43 736 779 736 781 0.95

Sequence Information

Coding Sequence
ATGGATATGACAAAGGACATCATGGACTTTGAACAGAAGCTCGACAGCGAGCAATACGAGCCAAATGATTACACAATGGTCAACATAGACATACCAAAGCAGCCAGAGCCGCAAACAGAAATGGCCTACGAAACGGCCAAGACAGAGGAGCGAGAGTTGGAAGAGACAACCACCGCAACTCCAACAGCAAACACAGAGCAACCAGCAGAAGCTGGCGAAGATCAGCAAgaggaggagcagcaacaacaggagttgaagctgaaactgaagttGGAACAGAAATTGTCACCGATAGTGAAGGAGGAAGCAATCACAACAGAAGAGAAACCAAATCGAATGAGAGCTGTGCTCAATGAGCAGCCACTGACGCCACCGCCACGTCCGCTCACCTCCAGCGAGGTCGTAGGTCACACCGATTCCGATGATCCCGAGTTGCGAGTCCAACTCACAGCGAAGAAATCCCGCTCTCTGCCTGTGTCCCCACAGCCTTTGGTCTCACACAATCTGTCGGCCATTGGACTCTTTGAGTTTggacaacacaacaacaataacaacaacaaaaagttgacaACAATAAGATCAACTGAGAAGCCAAAGATTGGCCAGAAATTGTTTGCAGCTCCAACACAACGCAAATCCTCGCCAGTTGGTGGAGATAATCAACAGTTTTGTCTGCGCTGGAACAACTATCAATCGAATCTGACGAATGTGTTCGATGAACTGCTGCAAAATGAATCCTTTGTGGATGTGACGCTCGCTTGCGAAGGACACTCGATCAAGGCGCACAAAATGGTTTTATCCGCTTGCTCTCCCTACTTTCAAGCACTGTTCTACGATAATCCCTGCCAGCATCCGATTATCATCATGCGCGACGTCAACTGGAGTGATCTGAAAGCGCTCGTTGAGTTCATGTATAAAGGCGAGATTAATGTGTGCCAGGATCAAATTAATCCGTTGCTAAAAGTCGCTGAAACTCTCAAGATACGAGGCTTGGCTGAAGTGAGCGCAGGTTCGAGTTCTGGGAACAATGCTGGGATTGGAGGAACTTCGTTGCTGCCTGAGCAACGCATGACTGTCTACgatgaggacgatgatgaggaactcgctgccgctgctgcgaTTATCAGAGATGAGGAGGATGACGATGAGCAGAAGCCAAAGCGAGCTCGTTTGCTGGCCAAACTCCAGGCGGAATCTGCGCTCGATCTCAATCAGCGTCAGCGCAAACGTTCCCGCGATGGCAGCTATGCCACGCCCAGTCCGCTGCCCTTGCCCTTGCCCCTGCGCTCGGAGTCaccgcaacaacaaagagcTGGAGTCACTCCTCAACCCTTGGCCATGACCACATCGACCATTGTGCGCAATCCGTTTGCCTCGCCCAATCCACAGTCGCTGCAGGCGCATCTCTCCGGCAGCTCGTCGTCCGCCTCGAGCAGCTCCGGTGGTGGCTCCTCCACAGTTGGCGGTGCCAGCGGCAACTCGGCTGCCTCCTGCATTAGCTCCGGctccgctgccgctgctgcgtCGAATGCTTCGGCCGCTTCGGCTGCGGCTGTTGGCAGCTATCGTCCCAGTGCACGCAGCTGCTCCCCGCCTCCGCCACCCTCGGCCCACAGCAATGGCTCCGCCGCTGCCGGCGCCCTCTCCTCGCCCACTGGCAATCCATCGGCCTCGTCCAATGCGCAGTCGCAACTGCCTCCGCACATGGCCGCCGCTGTGGCCGCTGCTGCCCATCATGCCTCCGCCTCGGCAGTGGCGCCTCCGCCGCCTTCGTCGGCCTCCTCGATGCATCATcatgctgcagctgccgcagctCAGCAGCTGGCTGCTCAGCATCAACTGGCGCATTCCCATGCAGCCATGGCCAGCGCCTTGGCTGCCGCTGGCGTCGGtggagctgctgctcctggcaatgcggctgctgctggcggAGCTGTGGGCAATGCTGCATCCTCGGTGGGTGCTCATCATGATGACATGGAAATCAAACCGGAAATTGCTGAGATGATACGTGAAGAAGAGCGGGCCAAAATGATTGAGACCGGCGGACATGGCTGGATGGGTGCTCCTGCAACAGGCACATCTGTGGCGGCAGACAGCTACCAATACCAATTGCAGTCGATGTGGCAAAAATGCTGGAACACTAACCAACAGAATCTGGTGCAACAGTTGCGCTTTCGTGAACGCGGCCCCCTCAAGTCTTGGCGCCCCGAAGCCATGGCAGAGGCCATCTTCAGTGTGCTAAAAGAAGGACTTTCGCTATCGCAGGCTGCTCGCAAATATGACATCCCTTATCCGACATTCGTGCTCTATGCCAATCGTGTACACAACATGCTGGGACCTTCGCTCGATGGCGGCACTGATCCCCGACCCAAGGCACGTGGCCGACCGCAGCGCATCCTGCTCGGCATGTGGCCAGAGGAGCTCATTCGCAGCGTCATCAAGGCCGTGGTGTTCCGTGACTATCGCGAGATCAAGGAGGACATGGGTGCGCATCAGTATGCCAACGGACAGGCGCATGGTGCACACTTTGGATCTGGCAACTCGTCAGCAGCCGCCAATGGCTACCACAACGCGGCGGTCAAGATGGCCGCCCAGAACGCTGCATTGGCACCGCCAGACAGCAGCAATCCACTGAGTACTATGACCGAGACCCTGCGCCGTCAGATCCtctcgcagcagcagccgcagcagtcGCCGCACGTCCAGTCGATGAACATGTACAAATCGCCAGCGTACTTGCAACGCTCGGAGATTGAGGATCAGGTGTCGGCTGCCGCAGCGGTGGCAGCGGCCAAGCATCAGCAGAACGAGCGACGTGGCACCGAGAATTTGCCCGACTTGAGCGCTCTGGGACTGATGGGATTGCCCGGCCTCAATGTGATGCCCTCGCAGCAGGCGCCGCATCAACGCGGCGcaggcggcggcggtggcggcggagGAAGCGGCGGACCAGGTGCTGCCATGCATCCCAGTGCCGCGAGCTATGCGCGAGAATTATCCCGAGAACGCGAGCGAGAGCGTGAGATGTCCAGGGATCGAGAACTAAAGGAGGCGATGCATGCCCGACAATATGGCAATCAGTCGCGTGGCTCCAACTCCTCGGCAGGCAGCAAATCGGCGTCGGGACACGGTGCATCATCGAGTCGACCGGGCGCCGCATCGCCGTATTCCACGCACTACGCCAAGCATCAGAGcaaggagcaacaacagcatccgAACTATGCGTACAACAAGCGTTTCCTGGAGAGTTTGCCCGCGGGCATTGACTTCGAGGCTATTGCCAATGGGCTGCTGCAAAAGTCGGTGAACAAGAGTCCCCGCTTCGAGGACTTCTTCCCCGGCCAGGACATGAGTGAACTCTTCGCCACCGCCGACGCCAACGCCGGAGCcgcagcggcggcagctgcgGCAGCCGCTGCTTATGCGCCGTCGCAGGTGCGAGAATCGCCGCTGATGAAGATcaagctggagcagcagcaggccaCCGAGCTGCCGCATGAGGATTGA
Protein Sequence
MDMTKDIMDFEQKLDSEQYEPNDYTMVNIDIPKQPEPQTEMAYETAKTEERELEETTTATPTANTEQPAEAGEDQQEEEQQQQELKLKLKLEQKLSPIVKEEAITTEEKPNRMRAVLNEQPLTPPPRPLTSSEVVGHTDSDDPELRVQLTAKKSRSLPVSPQPLVSHNLSAIGLFEFGQHNNNNNNKKLTTIRSTEKPKIGQKLFAAPTQRKSSPVGGDNQQFCLRWNNYQSNLTNVFDELLQNESFVDVTLACEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVNWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGSSSGNNAGIGGTSLLPEQRMTVYDEDDDEELAAAAAIIRDEEDDDEQKPKRARLLAKLQAESALDLNQRQRKRSRDGSYATPSPLPLPLPLRSESPQQQRAGVTPQPLAMTTSTIVRNPFASPNPQSLQAHLSGSSSSASSSSGGGSSTVGGASGNSAASCISSGSAAAAASNASAASAAAVGSYRPSARSCSPPPPPSAHSNGSAAAGALSSPTGNPSASSNAQSQLPPHMAAAVAAAAHHASASAVAPPPPSSASSMHHHAAAAAAQQLAAQHQLAHSHAAMASALAAAGVGGAAAPGNAAAAGGAVGNAASSVGAHHDDMEIKPEIAEMIREEERAKMIETGGHGWMGAPATGTSVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHGAHFGSGNSSAAANGYHNAAVKMAAQNAALAPPDSSNPLSTMTETLRRQILSQQQPQQSPHVQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAKHQQNERRGTENLPDLSALGLMGLPGLNVMPSQQAPHQRGAGGGGGGGGSGGPGAAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSAGSKSASGHGASSSRPGAASPYSTHYAKHQSKEQQQHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFATADANAGAAAAAAAAAAAYAPSQVRESPLMKIKLEQQQATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00522880;
90% Identity
iTF_00472423; iTF_00553783; iTF_00553666;
80% Identity
iTF_00472423;