Dmur008819.1
Basic Information
- Insect
- Drosophila murphyi
- Gene Symbol
- bab2
- Assembly
- GCA_018904325.1
- Location
- JAEIFX010000266.1:9699111-9701339[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-18 9.9e-15 53.9 0.0 1 43 59 102 59 104 0.95 2 2 0.36 7.4e+02 -0.2 0.1 29 42 380 394 380 396 0.89
Sequence Information
- Coding Sequence
- ATGATTGAGACGAGCGGACACGGCTGGATGGGCGCACCGGCAACAGGCGCATCTGTGGCGGCAGACAGTTACCAGTACCAGTTGCAGTCCATGTGGCAAAAATGCTGGAACACCAACCAACAGAATCTGGTGCAACAGTTGCGATTTCGCGAACGCGGACCCCTCAAATCCTGGCGACCCGAAGCCATGGCCGAGGCCATATTCAGTGTACTAAAAGAGGGACTCTCCCTCTCACAGGCCGCACGCAAATACGATATACCCTATCCGACATTTGTGCTCTACGCCAATCGGGTGCACAACATGTTGGGACCCTCGCTCGACGGCGGCACCGATCCCAGGCCCAAGGCACGCGGCCGACCCCAACGCATTCTGCTTGGCATGTGGCCCGAGGAACTCATACGCAGCGTCATCAAGGCGGTCGTCTTCCGCGACTACCGCGAGATCAAAGAGGACATCAATGCGCATCAGTATGCAAATGGACAGGCACATGGCGCGCACTTTGGCTCTGGCAACTCGTCGGCAGCTGCCAATGGGTATCATAGTGCCGCAGTCAAAATGGCGGCTCAGAATGCTGCACTTGCCCCGCCCGACGGCAGCAATGCGCTGAGCAGCATGACGGAGACCCTCCGCCGCCAGATACTCTCCCAGCAGCAACAGCAGCAGCACCAACAGCAATCGCCGCATGTTCATTCGATGAACATGTACAAGTCGCCGGCCTACTTGCAACGCTCCGAGATTGAGGATCAGGTGTCTGCCGCAGCGGCAGCAGCAGCCAAGCATCAGCACAGCGAGCGACGCGGCAGCGAGAATTTGCCCGACTTGAGTGCATTGGGTCTGATGGGGTTGCCGGGTCTGAATGTGATGCCATCGCAGCAGGCGCCACATCAGCGTGGAGGCGGTGGCGGCGGTGGCGGGGCAGGTAACGGGGGCAGTGCAGGCGCTGCCATGCATCCCAGTGCCGCCAGCTATGCGCGAGAGTTGTCGCGGGAGCGGGAGCGAGAGCGCGAGATGTCCCGGGATCGGGAGCTGAAGGAGGCGATGCATGCACGTCAGTATGGCAATCAGTCGCGTGGCTCCAACTCCTCCGGCGGCAGCAAATCGGCTGCTGGATCCTCGAGTCGTCCAGGTGCCGCATCCCCCTACTCCACGGTCTATGCGAAGCATGCCAAGGAGCATTCGAGTTACGCGTATAACAAACGCTTTCTGGAGTCGCTGCCGGCGGGCATTGATTTCGAGGCGATTGCCAACGGACTGCTGCACAAGTCGGTGAATAAGAGTCCGCGCTTCGAGGACTTCTTTCCCGGCCAGGATATGAGTGAGTTGTTTGCCAGCGCCACTGATGCAGTTGTCGGAGCTGGTGCCGGTTCGGCATCGGCAGCAGCGGCGGCAGCAGCAGCAGCCGCTGCCTATGCGCCGGCAGCGTTGCGCGAATCACCGCTGATGAAGATCAAGTTGGAGCAGCAGCAGCAGGCGACAGAGTTGCCCCACGAGGATTGA
- Protein Sequence
- MIETSGHGWMGAPATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDINAHQYANGQAHGAHFGSGNSSAAANGYHSAAVKMAAQNAALAPPDGSNALSSMTETLRRQILSQQQQQQHQQQSPHVHSMNMYKSPAYLQRSEIEDQVSAAAAAAAKHQHSERRGSENLPDLSALGLMGLPGLNVMPSQQAPHQRGGGGGGGGAGNGGSAGAAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSGGSKSAAGSSSRPGAASPYSTVYAKHAKEHSSYAYNKRFLESLPAGIDFEAIANGLLHKSVNKSPRFEDFFPGQDMSELFASATDAVVGAGAGSASAAAAAAAAAAAYAPAALRESPLMKIKLEQQQQATELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00593015;
- 90% Identity
- iTF_00573970;
- 80% Identity
- -