Dmur002354.1
Basic Information
- Insect
- Drosophila murphyi
- Gene Symbol
- -
- Assembly
- GCA_018904325.1
- Location
- JAEIFX010000066.1:10251111-10257893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6e-12 1.2e-08 34.3 0.0 1 40 412 452 412 455 0.90 2 4 3.3e-14 6.8e-11 41.6 0.1 2 39 467 504 466 507 0.94 3 4 7.7e-18 1.6e-14 53.2 0.0 1 45 521 566 521 566 0.98 4 4 7.9e-20 1.6e-16 59.6 0.0 1 43 573 616 573 617 0.97
Sequence Information
- Coding Sequence
- ATGGGTCTGCTGCGCACCGCGGAACAATTGAAAATCAAGGGTCTCTGTGAGCCGGCTGAGAATGCGGATGATTTAAATGACGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGGACAGAATCAAACATCGATCGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGGTCAGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCAGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACTCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAGGTGATTGAGGCCAAGCATTTGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATGCCACGCATGCGGAAATCAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGATGCCCTGCAAAATGCCTTGGAGGCGTTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTATACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAACACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCAAATCCAACGCCCTGGTCTGAGGATGCTATGAACGAGGCATTGAACTCGGTGCGCGTTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAGCGTGGCAAGTACGATGTGGTTGCCAATACCAGTGGCGTCTCGCTGAACAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGCGTCCAAACAGAAGCGTTGAGAAAGCGCCGACGGAGCTCGCTCCGACGGAGCCGAAGACGCCATTGATTGCAGCACCAACAACACCTCCACTGAAGCCGCCACCGCCGTCACCGCCGCCGACGCCGCCGACGCCGCCGACGCCGCCGCCGTCATCAAATTTCGCTTCAACTCGAAGCATTGGAAGCGCAAGCTGA
- Protein Sequence
- MGLLRTAEQLKIKGLCEPAENADDLNDAALATITVSENIQQAVVGNIGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSSQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSRPNRSVEKAPTELAPTEPKTPLIAAPTTPPLKPPPPSPPPTPPTPPTPPPSSNFASTRSIGSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560957;
- 90% Identity
- -
- 80% Identity
- -